csiLSFM combines light-sheet fluorescence microscopy and coherent Structured illumination for a lateral resolution below 100 nm

Proceedings of the National Academy of Sciences of the United States of America

Volumn 114, Issue 19, 2017, Pages 4869-4874

  Chang, Bo Jui ^a   Meza, Victor Didier Perez ^a   Stelzer, Ernst H K ^a  

^a GOETHE UNIVERSITY   (Germany)

Author keywords

Light sheet; LSFM; SIM; Spim; Structured illumination

Indexed keywords

ARTICLE; BLEACHING; COHERENT STRUCTURED ILLUMINATION LIGHT SHEET BASED FLUORESCENCE MICROSCOPY; ENDOPLASMIC RETICULUM; FLUORESCENCE MICROSCOPY; FREQUENCY; ILLUMINATION; IMAGE ANALYSIS; IMAGE QUALITY; MICROSCOPY; NONHUMAN; PRIORITY JOURNAL; REFRACTION INDEX; ROTATION; STRUCTURED ILLUMINATION MICROSCOPY; YEAST CELL; CYTOLOGY; DEVICES; PROCEDURES; SACCHAROMYCES CEREVISIAE;

ENDOPLASMIC RETICULUM; MICROSCOPY, FLUORESCENCE; SACCHAROMYCES CEREVISIAE;

EID: 85019124719     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1609278114     Document Type: Article

References (42)

1. Stelzer EHK (2015) Light-sheet fluorescence microscopy for quantitative biology. Nat Methods 12:23-26.
2. Huisken J, Swoger J, Del Bene F, Wittbrodt J, Stelzer EHK (2004) Optical sectioning deep inside live embryos by selective plane illumination microscopy. Science 305:1007-1009.
3. Keller PJ, Schmidt AD, Wittbrodt J, Stelzer EHK (2011) Digital scanned laser light-sheet fluorescence microscopy (DSLM) of zebrafish and Drosophila embryonic development. Cold Spring Harb Protoc 2011:1235-1243.
4. Strobl F, Stelzer EHK (2014) Non-invasive long-term fluorescence live imaging of Tribolium castaneum embryos. Development 141:2331-2338.
5. Strobl F, Schmitz A, Stelzer EHK (2015) Live imaging of Tribolium castaneum embryonic development using light-sheet-based fluorescence microscopy. Nat Protoc 10:1486-1507.
6. Maizel A, von Wangenheim D, Federici F, Haseloff J, Stelzer EHK (2011) Highresolution live imaging of plant growth in near physiological bright conditions using light sheet fluorescence microscopy. Plant J 68:377-385.
7. Pampaloni F, Ansari N, Stelzer EHK (2013) High-resolution deep imaging of live cellular spheroids with light-sheet-based fluorescence microscopy. Cell Tissue Res 352:161-177.
8. Cox IJ (1984) Scanning optical fluorescence microscopy. J Microsc 133:149-154.
9. Engelbrecht CJ, Stelzer EH (2006) Resolution enhancement in a light-sheet-based microscope (SPIM). Opt Lett 31:1477-1479.
10. Reynaud EG, Krzic U, Greger K, Stelzer EHK (2008) Light sheet-based fluorescence microscopy: More dimensions, more photons, and less photodamage. HFSP J 2:266-275.
11. Planchon TA, et al. (2011) Rapid three-dimensional isotropic imaging of living cells using Bessel beam plane illumination. Nat Methods 8:417-423.
12. Cella Zanacchi F, et al. (2011) Live-cell 3D super-resolution imaging in thick biological samples. Nat Methods 8:1047-1049.
13. Friedrich M, Gan Q, Ermolayev V, Harms GS (2011) STED-SPIM: Stimulated emission depletion improves sheet illumination microscopy resolution. Biophys J 100:L43-L45.
14. Gustafsson MGL, Agard DA, Sedat JW (2000) Doubling the lateral resolution of widefield fluorescence microscopy using structured illumination. BiOS 2000 The International Symposium on Biomedical Optics, eds Conchello J-A, Cogswell CJ, Tescher AG, Wilson T (International Society for Optics and Photonics, Bellingham, WA), pp 141-150.
15. Fedosseev R, Belyaev Y, Frohn J, Stemmer A (2005) Structured light illumination for extended resolution in fluorescence microscopy. Opt Lasers Eng 43:403-414.
16. Heintzmann R, Cremer CG (1999) Laterally modulated excitation microscopy: Improvement of resolution by using a diffraction grating. BiOS Europe'98, eds Bigio IJ, Schneckenburger H, Slavik J, Svanberg K, Viallet PM (International Society for Optics and Photonics, Bellingham, WA), pp 185-196.
17. Chang B-J, Chou L-J, Chang Y-C, Chiang S-Y (2009) Isotropic image in structured illumination microscopy patterned with a spatial light modulator. Opt Express 17:14710-14721.
18. Kner P, Chhun BB, Griffis ER, Winoto L, Gustafsson MGL (2009) Super-resolution video microscopy of live cells by structured illumination. Nat Methods 6:339-342.
19. Hirvonen LM, Wicker K, Mandula O, Heintzmann R (2009) Structured illumination microscopy of a living cell. Eur Biophys J 38:807-812.
20. Wohland T, Shi X, Sankaran J, Stelzer EHK (2010) Single plane illumination fluorescence correlation spectroscopy (SPIM-FCS) probes inhomogeneous three-dimensional environments. Opt Express 18:10627-10641.
21. Greger K, Neetz MJ, Reynaud EG, Stelzer EHK (2011) Three-dimensional fluorescence lifetime imaging with a single plane illumination microscope provides an improved signal to noise ratio. Opt Express 19:20743-20750.
22. Costa A, Candeo A, Fieramonti L, Valentini G, Bassi A (2013) Calcium dynamics in root cells of Arabidopsis thaliana visualized with selective plane illumination microscopy. PLoS One 8:e75646.
23. Oshima Y, et al. (2012) Light sheet-excited spontaneous Raman imaging of a living fish by optical sectioning in a wide field Raman microscope. Opt Express 20:16195.
24. Gao L, et al. (2012) Noninvasive imaging beyond the diffraction limit of 3D dynamics in thickly fluorescent specimens. Cell 151:1370-1385.
25. Chen B-C, et al. (2014) Lattice light-sheet microscopy: Imaging molecules to embryos at high spatiotemporal resolution. Science 346:1257998.
26. Beck M, Aschwanden M, Stemmer A (2008) Sub-100-nanometre resolution in total internal reflection fluorescence microscopy. J Microsc 232:99-105.
27. Fiolka R, Beck M, Stemmer A (2008) Structured illumination in total internal reflection fluorescence microscopy using a spatial light modulator. Opt Lett 33:1629-1631.
28. Greger K, Swoger J, Stelzer EHK (2007) Basic building units and properties of a fluorescence single plane illumination microscope. Rev Sci Instrum 78:023705.
29. Perez V, Chang BJ, Stelzer EH (2016) Optimal 2D-SIM reconstruction by two filtering steps with Richardson-Lucy deconvolution. Sci Rep 6:37149.
30. Lajoie P, Moir RD, Willis IM, Snapp EL (2012) Kar2p availability defines distinct forms of endoplasmic reticulum stress in living cells. Mol Biol Cell 23:955-964.
31. Neil MAA, Juškaitis R, Wilson T (1997) Method of obtaining optical sectioning by using structured light in a conventional microscope. Opt Lett 22:1905-1907.
32. Breuninger T, Greger K, Stelzer EHK (2007) Lateral modulation boosts image quality in single plane illumination fluorescence microscopy. Opt Lett 32:1938-1940.
33. Keller PJ, et al. (2010) Fast, high-contrast imaging of animal development with scanned light sheet-based structured-illumination microscopy. Nat Methods 7:637-642.
34. Mertz J, Kim J (2010) Scanning light-sheet microscopy in the whole mouse brain with HiLo background rejection. J Biomed Opt 15:016027.
35. Huang H-C, Chang B-J, Chou L-J, Chiang S-Y (2013) Three-beam interference with circular polarization for structured illumination microscopy. Opt Express 21:23963-23977.
36. Westrate LM, Lee JE, Prinz WA, Voeltz GK (2015) Form follows function: the importance of endoplasmic reticulum shape. Annu Rev Biochem 84:791-811.
37. Knuppertz L, Hamann A, Pampaloni F, Stelzer E, Osiewacz HD (2014) Identification of autophagy as a longevity-assurance mechanism in the aging model Podospora anserina. Autophagy. Available at www.tandfonline.com/doi/full/10.4161/auto.28148. Accessed October 12, 2015.
38. Endesfelder U, et al. (2013) Multiscale spatial organization of RNA polymerase in Escherichia coli. Biophys J 105:172-181.
39. Spahn C, Endesfelder U, Heilemann M (2014) Super-resolution imaging of Escherichia coli nucleoids reveals highly structured and asymmetric segregation during fast growth. J Struct Biol 185:243-249.
40. Shao L, et al. (2008) I5S: Wide-field light microscopy with 100-nm-scale resolution in three dimensions. Biophys J 94:4971-4983.
41. Verveer PJ, et al. (2007) High-resolution three-dimensional imaging of large specimens with light sheet-based microscopy. Nat Methods 4:311-313.
42. Swoger J, Verveer P, Greger K, Huisken J, Stelzer EHK (2007) Multi-view image fusion improves resolution in three-dimensional microscopy. Opt Express 15:8029-8042.