-
1
-
-
67849122320
-
MEME SUITE: Tools for motif discovery and searching
-
Bailey, T. L., Boden, M., Buske, F. A., Frith, M., Grant, C. E., Clementi, L., et al. (2009). MEME SUITE: tools for motif discovery and searching. Nucleic Acids Res. 37, W202-W208. doi: 10.1093/nar/gkp335
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. W202-W208
-
-
Bailey, T.L.1
Boden, M.2
Buske, F.A.3
Frith, M.4
Grant, C.E.5
Clementi, L.6
-
2
-
-
35348964707
-
How many genes are needed to make a pollen tube? Lessons from transcriptomics
-
Becker, J. D., and Feijo, J. A. (2007). How many genes are needed to make a pollen tube? lessons from transcriptomics. Ann. Bot. 100, 1117-1123. doi: 10.1093/aob/mcm208
-
(2007)
Ann. Bot.
, vol.100
, pp. 1117-1123
-
-
Becker, J.D.1
Feijo, J.A.2
-
3
-
-
84879482267
-
Deciphering the diploid ancestral genome of the Mesohexaploid Brassica rapa
-
Cheng, F., Mandakova, T., Wu, J., Xie, Q., Lysak, M. A., and Wang, X. (2013). Deciphering the diploid ancestral genome of the Mesohexaploid Brassica rapa. Plant Cell 25, 1541-1554. doi: 10.1105/tpc.113.110486
-
(2013)
Plant Cell
, vol.25
, pp. 1541-1554
-
-
Cheng, F.1
Mandakova, T.2
Wu, J.3
Xie, Q.4
Lysak, M.A.5
Wang, X.6
-
4
-
-
84888771799
-
Syntenic gene analysis between Brassica rapa and other Brassicaceae species
-
Cheng, F., Wu, J., Fang, L., and Wang, X. (2012). Syntenic gene analysis between Brassica rapa and other Brassicaceae species. Front. Plant Sci. 3: 198. doi: 10.3389/fpls.2012.00198
-
(2012)
Front. Plant Sci.
, vol.3
, pp. 198
-
-
Cheng, F.1
Wu, J.2
Fang, L.3
Wang, X.4
-
5
-
-
84964222367
-
Genome-wide analysis of the MADS-box gene family in Brassica rapa (Chinese cabbage)
-
Duan, W., Song, X., Liu, T., Huang, Z., Ren, J., Hou, X., et al. (2015). Genome-wide analysis of the MADS-box gene family in Brassica rapa (Chinese cabbage). Mol. Genet. Genomics 290, 239-255. doi: 10.1007/s00438-014-0912-7
-
(2015)
Mol. Genet. Genomics
, vol.290
, pp. 239-255
-
-
Duan, W.1
Song, X.2
Liu, T.3
Huang, Z.4
Ren, J.5
Hou, X.6
-
6
-
-
70349682921
-
Gene and genome duplications: The impact of dosage-sensitivity on the fate of nuclear genes
-
Edger, P. P., and Pires, J. C. (2009). Gene and genome duplications: the impact of dosage-sensitivity on the fate of nuclear genes. Chromosome Res. 17: 699. doi: 10.1007/s10577-009-9055-9
-
(2009)
Chromosome Res.
, vol.17
, pp. 699
-
-
Edger, P.P.1
Pires, J.C.2
-
7
-
-
34247571020
-
Posttranslational modifications and subcellular localization signals: Indicators of sequence regions without inherent 3D structure?
-
Eisenhaber, B., and Eisenhaber, F. (2007). Posttranslational modifications and subcellular localization signals: indicators of sequence regions without inherent 3D structure? Curr. Protein Pept. Sci. 8, 197-203. doi: 10.2174/138920307780363424
-
(2007)
Curr. Protein Pept. Sci.
, vol.8
, pp. 197-203
-
-
Eisenhaber, B.1
Eisenhaber, F.2
-
8
-
-
77953210908
-
Arabinogalactanproteins: Key regulators at the cell surface?
-
Ellis, M., Egelund, J., Schultz, C. J., and Bacic, A. (2010). Arabinogalactanproteins: key regulators at the cell surface? Plant Physiol. 153, 403-419. doi: 10.1104/pp.110.156000
-
(2010)
Plant Physiol.
, vol.153
, pp. 403-419
-
-
Ellis, M.1
Egelund, J.2
Schultz, C.J.3
Bacic, A.4
-
9
-
-
0034863410
-
The complex structures of arabinogalactan-proteins and the journey towards understanding function
-
Gaspar, Y., Johnson, K. L., McKenna, J. A., Bacic, A., and Schultz, C. J. (2001). The complex structures of arabinogalactan-proteins and the journey towards understanding function. Plant Mol. Biol. 47, 161-176. doi: 10.1023/A: 1010683432529
-
(2001)
Plant Mol. Biol.
, vol.47
, pp. 161-176
-
-
Gaspar, Y.1
Johnson, K.L.2
McKenna, J.A.3
Bacic, A.4
Schultz, C.J.5
-
11
-
-
84907310651
-
Arabinogalactan protein 31 (AGP31), a putative network-forming protein in Arabidopsis thaliana cell walls?
-
Hijazi, M., Roujol, D., Nguyen-Kim, H., Del Rocio Cisneros Castillo, L., Saland, E., Jamet, E., et al. (2014). Arabinogalactan protein 31 (AGP31), a putative network-forming protein in Arabidopsis thaliana cell walls? Ann. Bot. 114, 1087-1097. doi: 10.1093/aob/mcu038
-
(2014)
Ann. Bot.
, vol.114
, pp. 1087-1097
-
-
Hijazi, M.1
Roujol, D.2
Nguyen-Kim, H.3
Del Rocio Cisneros Castillo, L.4
Saland, E.5
Jamet, E.6
-
12
-
-
57349146908
-
Characterization of a putative pollen-specific arabinogalactan protein gene, BcMF8, from Brassica campestris ssp chinensis
-
Huang, L., Cao, J. S., Zhang, A. H., and Ye, Y. Q. (2008b). Characterization of a putative pollen-specific arabinogalactan protein gene, BcMF8, from Brassica campestris ssp chinensis. Mol. Biol. Rep. 35, 631-639. doi: 10.1007/s11033-007-9133-z
-
(2008)
Mol. Biol. Rep.
, vol.35
, pp. 631-639
-
-
Huang, L.1
Cao, J.S.2
Zhang, A.H.3
Ye, Y.Q.4
-
13
-
-
42449086405
-
Transcriptional differences between the male-sterile mutant bcms and wild-type Brassica campestris ssp. chinensis reveal genes related to pollen development
-
Huang, L., Cao, J., Ye, W., Liu, T., Jiang, L., and Ye, Y. (2008a). Transcriptional differences between the male-sterile mutant bcms and wild-type Brassica campestris ssp. chinensis reveal genes related to pollen development. Plant Biol. 10, 342-355. doi: 10.1111/j.1438-8677.2008.00039.x
-
(2008)
Plant Biol.
, vol.10
, pp. 342-355
-
-
Huang, L.1
Cao, J.2
Ye, W.3
Liu, T.4
Jiang, L.5
Ye, Y.6
-
14
-
-
77949550960
-
Characterization of the malesterile line Bcajh97-01A/B and identification of candidate genes for genic male sterility in Chinese cabbage-pak-choi
-
Huang, L., Ye, W. Z., Liu, T. T., and Cao, J. S. (2009). Characterization of the malesterile line Bcajh97-01A/B and identification of candidate genes for genic male sterility in Chinese cabbage-pak-choi. J. Am. Soc. Hortic. Sci. 134, 632-640.
-
(2009)
J. Am. Soc. Hortic. Sci.
, vol.134
, pp. 632-640
-
-
Huang, L.1
Ye, W.Z.2
Liu, T.T.3
Cao, J.S.4
-
15
-
-
84873358815
-
Identification of gene expression profile during fertilization in Brassica campestris subsp. chinensis
-
Jiang, J., Jiang, J., Qiu, L., Miao, Y., Yao, L., and Cao, J. (2013). Identification of gene expression profile during fertilization in Brassica campestris subsp. chinensis. Genome 56, 39-48. doi: 10.1139/gen-2012-0088
-
(2013)
Genome
, vol.56
, pp. 39-48
-
-
Jiang, J.1
Jiang, J.2
Qiu, L.3
Miao, Y.4
Yao, L.5
Cao, J.6
-
16
-
-
85027941250
-
Genome-wide identification, classification and expression analysis of genes encoding putative fasciclin-like arabinogalactan proteins in Chinese cabbage (Brassica rapa L.)
-
Jun, L., and Xiaoming, W. (2012). Genome-wide identification, classification and expression analysis of genes encoding putative fasciclin-like arabinogalactan proteins in Chinese cabbage (Brassica rapa L.). Mol. Biol. Rep. 39, 10541-10555. doi: 10.1007/s11033-012-1940-1
-
(2012)
Mol. Biol. Rep.
, vol.39
, pp. 10541-10555
-
-
Jun, L.1
Xiaoming, W.2
-
17
-
-
0028371792
-
Extensin: Repetitive motifs, functional sites, post-translational codes, and phylogeny
-
Kieliszewski, M. J., and Lamport, D. T. (1994). Extensin: repetitive motifs, functional sites, post-translational codes, and phylogeny. Plant J. 5, 157-172. doi: 10.1046/j.1365-313X.1994.05020157.x
-
(1994)
Plant J.
, vol.5
, pp. 157-172
-
-
Kieliszewski, M.J.1
Lamport, D.T.2
-
18
-
-
84904275104
-
Functional innovations of three chronological mesohexaploid Brassica rapa genomes
-
Kim, J., Lee, J., Choi, J. P., Park, I., Yang, K., Kim, M. K., et al. (2014). Functional innovations of three chronological mesohexaploid Brassica rapa genomes. BMC Genomics 15: 606. doi: 10.1186/1471-2164-15-606
-
(2014)
BMC Genomics
, vol.15
, pp. 606
-
-
Kim, J.1
Lee, J.2
Choi, J.P.3
Park, I.4
Yang, K.5
Kim, M.K.6
-
19
-
-
84888003828
-
Taxonomy and systematics are key to biological information: Arabidopsis, Eutrema (Thellungiella), Noccaea and Schrenkiella (Brassicaceae) as examples
-
Koch, M. A., and German, D. A. (2013). Taxonomy and systematics are key to biological information: Arabidopsis, Eutrema (Thellungiella), Noccaea and Schrenkiella (Brassicaceae) as examples. Front. Plant Sci. 4: 267. doi: 10.3389/fpls.2013.00267
-
(2013)
Front. Plant Sci.
, vol.4
, pp. 267
-
-
Koch, M.A.1
German, D.A.2
-
20
-
-
84875734874
-
The phytohormone crosstalk paradigm takes center stage in understanding how plants respond to abiotic stresses
-
Kohli, A., Sreenivasulu, N., Lakshmanan, P., and Kumar, P. P. (2013). The phytohormone crosstalk paradigm takes center stage in understanding how plants respond to abiotic stresses. Plant Cell Rep. 32, 945-957. doi: 10.1007/s00299-013-1461-y
-
(2013)
Plant Cell Rep.
, vol.32
, pp. 945-957
-
-
Kohli, A.1
Sreenivasulu, N.2
Lakshmanan, P.3
Kumar, P.P.4
-
21
-
-
69649109364
-
Circos: An information aesthetic for comparative genomics
-
Krzywinski, M., Schein, J., Birol, I., Connors, J., Gascoyne, R., Horsman, D., et al. (2009). Circos: an information aesthetic for comparative genomics. Genome Res. 19, 1639-1645. doi: 10.1101/gr.092759.109
-
(2009)
Genome Res.
, vol.19
, pp. 1639-1645
-
-
Krzywinski, M.1
Schein, J.2
Birol, I.3
Connors, J.4
Gascoyne, R.5
Horsman, D.6
-
22
-
-
0033832077
-
The Arabidopsis sugarinsensitive mutants sis4 and sis5 are defective in abscisic acid synthesis and response
-
Laby, R. J., Kincaid, M. S., Kim, D., and Gibson, S. I. (2000). The Arabidopsis sugarinsensitive mutants sis4 and sis5 are defective in abscisic acid synthesis and response. Plant J. 23, 587-596. doi: 10.1046/j.1365-313x.2000.00833.x
-
(2000)
Plant J.
, vol.23
, pp. 587-596
-
-
Laby, R.J.1
Kincaid, M.S.2
Kim, D.3
Gibson, S.I.4
-
23
-
-
60249083825
-
A pollen protein, NaPCCP, that binds pistil arabinogalactan proteins also binds phosphatidylinositol 3-phosphate and associates with the pollen tube endomembrane system
-
Lee, C. B., Kim, S., and McClure, B. (2009). A pollen protein, NaPCCP, that binds pistil arabinogalactan proteins also binds phosphatidylinositol 3-phosphate and associates with the pollen tube endomembrane system. Plant Physiol. 149, 791-802. doi: 10.1104/pp.108.127936
-
(2009)
Plant Physiol.
, vol.149
, pp. 791-802
-
-
Lee, C.B.1
Kim, S.2
McClure, B.3
-
24
-
-
55249116526
-
Pollen proteins bind to the C-terminal domain of Nicotiana alata pistil arabinogalactan proteins
-
Lee, C. B., Swatek, K. N., and McClure, B. (2008). Pollen proteins bind to the C-terminal domain of Nicotiana alata pistil arabinogalactan proteins. J. Biol. Chem. 283, 26965-26973. doi: 10.1074/jbc.M804410200
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 26965-26973
-
-
Lee, C.B.1
Swatek, K.N.2
McClure, B.3
-
25
-
-
54349099978
-
Arabinogalactan proteins 6 and 11 are required for stamen and pollen function in Arabidopsis
-
Levitin, B., Richter, D., Markovich, I., and Zik, M. (2008). Arabinogalactan proteins 6 and 11 are required for stamen and pollen function in Arabidopsis. Plant J. 56, 351-363. doi: 10.1111/j.1365-313X.2008.03607.x
-
(2008)
Plant J.
, vol.56
, pp. 351-363
-
-
Levitin, B.1
Richter, D.2
Markovich, I.3
Zik, M.4
-
26
-
-
84873412378
-
The putative phytocyanin genes in Chinese cabbage (Brassica rapa L.): Genome-wide identification, classification and expression analysis
-
Li, J., Gao, G., Zhang, T., and Wu, X. (2013). The putative phytocyanin genes in Chinese cabbage (Brassica rapa L.): genome-wide identification, classification and expression analysis. Mol. Genet. Genomics 288, 1-20. doi: 10.1007/s00438-012-0726-4
-
(2013)
Mol. Genet. Genomics
, vol.288
, pp. 1-20
-
-
Li, J.1
Gao, G.2
Zhang, T.3
Wu, X.4
-
27
-
-
84896978879
-
BcMF8, a putative arabinogalactan protein-encoding gene, contributes to pollen wall development, aperture formation and pollen tube growth in Brassica campestris
-
Lin, S., Dong, H., Zhang, F., Qiu, L., Wang, F., Cao, J., et al. (2014). BcMF8, a putative arabinogalactan protein-encoding gene, contributes to pollen wall development, aperture formation and pollen tube growth in Brassica campestris. Ann. Bot. 113, 777-788. doi: 10.1093/aob/mct315
-
(2014)
Ann. Bot.
, vol.113
, pp. 777-788
-
-
Lin, S.1
Dong, H.2
Zhang, F.3
Qiu, L.4
Wang, F.5
Cao, J.6
-
28
-
-
36248965776
-
A nonclassical arabinogalactan protein gene highly expressed in vascular tissues, AGP31, is transcriptionally repressed by methyl jasmonic acid in Arabidopsis
-
Liu, C., and Mehdy, M. C. (2007). A nonclassical arabinogalactan protein gene highly expressed in vascular tissues, AGP31, is transcriptionally repressed by methyl jasmonic acid in Arabidopsis. Plant Physiol. 145, 863-874. doi: 10.1104/pp.107.102657
-
(2007)
Plant Physiol.
, vol.145
, pp. 863-874
-
-
Liu, C.1
Mehdy, M.C.2
-
29
-
-
84906990712
-
Genomewide identification, phylogeny, duplication, and expression analyses of twocomponent system genes in Chinese cabbage (Brassica rapa ssp. pekinensis)
-
Liu, Z., Zhang, M., Kong, L., Lv, Y., Zou, M., Lu, G., et al. (2014). Genomewide identification, phylogeny, duplication, and expression analyses of twocomponent system genes in Chinese cabbage (Brassica rapa ssp. pekinensis). DNA Res. 21, 379-396. doi: 10.1093/dnares/dsu004
-
(2014)
DNA Res.
, vol.21
, pp. 379-396
-
-
Liu, Z.1
Zhang, M.2
Kong, L.3
Lv, Y.4
Zou, M.5
Lu, G.6
-
30
-
-
0035710746
-
Analysis of relative gene expression data using real-time quantitative PCR and the 2-11CT Method
-
Livak, K. J., and Schmittgen, T. D. (2001). Analysis of relative gene expression data using real-time quantitative PCR and the 2-11CT Method. Methods 25, 402-408. doi: 10.1006/meth.2001.1262
-
(2001)
Methods
, vol.25
, pp. 402-408
-
-
Livak, K.J.1
Schmittgen, T.D.2
-
31
-
-
77954744704
-
Genome-wide identification, classification, and expression analysis of the arabinogalactan protein gene family in rice (Oryza sativa L.)
-
Ma, H., and Zhao, J. (2010). Genome-wide identification, classification, and expression analysis of the arabinogalactan protein gene family in rice (Oryza sativa L.). J. Exp. Bot. 61, 2647-2668. doi: 10.1093/jxb/erq104
-
(2010)
J. Exp. Bot.
, vol.61
, pp. 2647-2668
-
-
Ma, H.1
Zhao, J.2
-
32
-
-
38949214365
-
Defense-related signaling by interaction of arabinogalactan proteins and beta-glucosyl Yariv reagent inhibits gibberellin signaling in barley aleurone cells
-
Mashiguchi, K., Urakami, E., Hasegawa, M., Sanmiya, K., Matsumoto, I., Yamaguchi, I., et al. (2008). Defense-related signaling by interaction of arabinogalactan proteins and beta-glucosyl Yariv reagent inhibits gibberellin signaling in barley aleurone cells. Plant Cell Physiol. 49, 178-190. doi: 10.1093/pcp/pcm175
-
(2008)
Plant Cell Physiol.
, vol.49
, pp. 178-190
-
-
Mashiguchi, K.1
Urakami, E.2
Hasegawa, M.3
Sanmiya, K.4
Matsumoto, I.5
Yamaguchi, I.6
-
33
-
-
0032972509
-
PSORT: A program for detecting sorting signals in proteins and predicting their subcellular localization
-
Nakai, K., and Horton, P. (1999). PSORT: a program for detecting sorting signals in proteins and predicting their subcellular localization. Trends Biochem. Sci. 24, 34-36. doi: 10.1016/S0968-0004(98)01336-X
-
(1999)
Trends Biochem. Sci.
, vol.24
, pp. 34-36
-
-
Nakai, K.1
Horton, P.2
-
34
-
-
0030614959
-
Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites
-
Nielsen, H., Engelbrecht, J., Brunak, S., and von Heijne, G. (1997). Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites. Protein Eng. 10, 1-6. doi: 10.1093/protein/10.1.1
-
(1997)
Protein Eng.
, vol.10
, pp. 1-6
-
-
Nielsen, H.1
Engelbrecht, J.2
Brunak, S.3
Von Heijne, G.4
-
35
-
-
34249848751
-
CEGMA: A pipeline to accurately annotate core genes in eukaryotic genomes
-
Parra, G., Bradnam, K., and Korf, I. (2007). CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes. Bioinformatics 23, 1061-1067. doi: 10.1093/bioinformatics/btm071
-
(2007)
Bioinformatics
, vol.23
, pp. 1061-1067
-
-
Parra, G.1
Bradnam, K.2
Korf, I.3
-
36
-
-
0001365103
-
Developmental regulation of a plasma membrane arabinogalactan protein epitope in oilseed rape flowers
-
Pennell, R. I., Janniche, L., Kjellbom, P., Scofield, G. N., Peart, J. M., and Roberts, K. (1991). Developmental regulation of a plasma membrane arabinogalactan protein epitope in oilseed rape flowers. Plant Cell 3, 1317-1326. doi: 10.1105/tpc.3.12.1317
-
(1991)
Plant Cell
, vol.3
, pp. 1317-1326
-
-
Pennell, R.I.1
Janniche, L.2
Kjellbom, P.3
Scofield, G.N.4
Peart, J.M.5
Roberts, K.6
-
37
-
-
84962345478
-
Love is strong, and you’re so sweet": JAGGER is essential for persistent synergid degeneration and polytubey block in Arabidopsis thaliana
-
Pereira, A.M., Nobre, M. S., Pinto, S. C., Lopes, A. L., Costa, M. L., Masiero, S., et al. (2016). "Love is strong, and you’re so sweet": JAGGER is essential for persistent synergid degeneration and polytubey block in Arabidopsis thaliana. Mol. Plant 9, 601-614. doi: 10.1016/j.molp.2016.01.002
-
(2016)
Mol. Plant
, vol.9
, pp. 601-614
-
-
Pereira, A.M.1
Nobre, M.S.2
Pinto, S.C.3
Lopes, A.L.4
Costa, M.L.5
Masiero, S.6
-
38
-
-
29444444903
-
Expression of arabinogalactan protein genes in pollen tubes of Arabidopsis thaliana
-
Pereira, L. G., Coimbra, S., Oliveira, H., Monteiro, L., and Sottomayor, M. (2006). Expression of arabinogalactan protein genes in pollen tubes of Arabidopsis thaliana. Planta 223, 374-380. doi: 10.1007/s00425-005-0137-4
-
(2006)
Planta
, vol.223
, pp. 374-380
-
-
Pereira, L.G.1
Coimbra, S.2
Oliveira, H.3
Monteiro, L.4
Sottomayor, M.5
-
39
-
-
80053345905
-
SignalP 4.0: Discriminating signal peptides from transmembrane regions
-
Petersen, T. N., Brunak, S., von Heijne, G., and Nielsen, H. (2011). SignalP 4.0: discriminating signal peptides from transmembrane regions. Nat. Methods 8, 785-786. doi: 10.1038/nmeth.1701
-
(2011)
Nat. Methods
, vol.8
, pp. 785-786
-
-
Petersen, T.N.1
Brunak, S.2
Von Heijne, G.3
Nielsen, H.4
-
40
-
-
26944493068
-
Gene family analysis of the Arabidopsis pollen transcriptome reveals biological implications for cell growth, division control, and gene expression regulation
-
Pina, C., Pinto, F., Feijo, J. A., and Becker, J. D. (2005). Gene family analysis of the Arabidopsis pollen transcriptome reveals biological implications for cell growth, division control, and gene expression regulation. Plant Physiol. 138, 744-756. doi: 10.1104/pp.104.057935
-
(2005)
Plant Physiol.
, vol.138
, pp. 744-756
-
-
Pina, C.1
Pinto, F.2
Feijo, J.A.3
Becker, J.D.4
-
41
-
-
33745908987
-
Sugar sensing and signaling in plants: Conserved and novel mechanisms
-
Rolland, F., Baena-Gonzalez, E., and Sheen, J. (2006). Sugar sensing and signaling in plants: conserved and novel mechanisms. Annu. Rev. Plant Biol. 57, 675-709. doi: 10.1146/annurev.arplant.57.032905.105441
-
(2006)
Annu. Rev. Plant Biol.
, vol.57
, pp. 675-709
-
-
Rolland, F.1
Baena-Gonzalez, E.2
Sheen, J.3
-
42
-
-
8544261174
-
Posttranslational modifications of arabinogalactan-peptides of Arabidopsis thaliana. endoplasmic reticulum and glycosylphosphatidylinositol-anchor signal cleavage sites and hydroxylation of proline
-
Schultz, C. J., Ferguson, K. L., Lahnstein, J., and Bacic, A. (2004). Posttranslational modifications of arabinogalactan-peptides of Arabidopsis thaliana. endoplasmic reticulum and glycosylphosphatidylinositol-anchor signal cleavage sites and hydroxylation of proline. J. Biol. Chem. 279, 45503-45511. doi: 10.1074/jbc.M407594200
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 45503-45511
-
-
Schultz, C.J.1
Ferguson, K.L.2
Lahnstein, J.3
Bacic, A.4
-
43
-
-
0037008178
-
Using genomic resources to guide research directions. the arabinogalactan protein gene family as a test case
-
Schultz, C. J., Rumsewicz, M. P., Johnson, K. L., Jones, B. J., Gaspar, Y. M., and Bacic, A. (2002). Using genomic resources to guide research directions. the arabinogalactan protein gene family as a test case. Plant Physiol. 129, 1448-1463. doi: 10.1104/pp.003459
-
(2002)
Plant Physiol.
, vol.129
, pp. 1448-1463
-
-
Schultz, C.J.1
Rumsewicz, M.P.2
Johnson, K.L.3
Jones, B.J.4
Gaspar, Y.M.5
Bacic, A.6
-
44
-
-
0028155874
-
Effects of Yariv phenylglycosides on Rosa cell suspensions: Evidence for the involvement of arabinogalactanproteins in cell proliferation
-
Serpe, M. D., and Nothnagel, E. A. (1994). Effects of Yariv phenylglycosides on Rosa cell suspensions: evidence for the involvement of arabinogalactanproteins in cell proliferation. Planta 193, 542-550. doi: 10.1007/BF02411560
-
(1994)
Planta
, vol.193
, pp. 542-550
-
-
Serpe, M.D.1
Nothnagel, E.A.2
-
45
-
-
0034788422
-
Arabinogalactan-proteins: Structure, expression and function
-
Showalter, A. M. (2001). Arabinogalactan-proteins: structure, expression and function. Cell. Mol. Life Sci. 58, 1399-1417. doi: 10.1007/PL00000784
-
(2001)
Cell. Mol. Life Sci.
, vol.58
, pp. 1399-1417
-
-
Showalter, A.M.1
-
46
-
-
77953193626
-
A bioinformatics approach to the identification, classification, and analysis of hydroxyproline-rich glycoproteins
-
Showalter, A. M., Keppler, B., Lichtenberg, J., Gu, D., and Welch, L. R. (2010). A bioinformatics approach to the identification, classification, and analysis of hydroxyproline-rich glycoproteins. Plant Physiol. 153, 485-513. doi: 10.1104/pp.110.156554
-
(2010)
Plant Physiol.
, vol.153
, pp. 485-513
-
-
Showalter, A.M.1
Keppler, B.2
Lichtenberg, J.3
Gu, D.4
Welch, L.R.5
-
47
-
-
0034486632
-
Sugar-induced signal transduction in plants
-
Smeekens, S. (2000). Sugar-induced signal transduction in plants. Annu. Rev. Plant Physiol. Plant Mol. Biol. 51, 49-81. doi: 10.1146/annurev.arplant.51.1.49
-
(2000)
Annu. Rev. Plant Physiol. Plant Mol. Biol.
, vol.51
, pp. 49-81
-
-
Smeekens, S.1
-
48
-
-
33745477004
-
Overexpression of INFLORESCENCE DEFICIENT IN ABSCISSION activates cell separation in vestigial abscission zones in Arabidopsis
-
Stenvik, G. E., Butenko, M. A., Urbanowicz, B. R., Rose, J. K., and Aalen, R. B. (2006). Overexpression of INFLORESCENCE DEFICIENT IN ABSCISSION activates cell separation in vestigial abscission zones in Arabidopsis. Plant Cell 18, 1467-1476. doi: 10.1105/tpc.106.042036
-
(2006)
Plant Cell
, vol.18
, pp. 1467-1476
-
-
Stenvik, G.E.1
Butenko, M.A.2
Urbanowicz, B.R.3
Rose, J.K.4
Aalen, R.B.5
-
49
-
-
0035986767
-
A role for arabinogalactan proteins in gibberellin-induced a-amylase production in barley aleurone cells
-
Suzuki, Y., Kitagawa, M., Knox, J. P., and Yamaguchi, I. (2002). A role for arabinogalactan proteins in gibberellin-induced a-amylase production in barley aleurone cells. Plant J. 29, 733-741. doi: 10.1046/j.1365-313X.2002.01259.x
-
(2002)
Plant J.
, vol.29
, pp. 733-741
-
-
Suzuki, Y.1
Kitagawa, M.2
Knox, J.P.3
Yamaguchi, I.4
-
50
-
-
84890330527
-
MEGA6: Molecular evolutionary genetics analysis version 6.0
-
Tamura, K., Stecher, G., Peterson, D., Filipski, A., and Kumar, S. (2013). MEGA6: molecular evolutionary genetics analysis version 6.0. Mol. Biol. Evol. 30, 2725-2729. doi: 10.1093/molbev/mst197
-
(2013)
Mol. Biol. Evol.
, vol.30
, pp. 2725-2729
-
-
Tamura, K.1
Stecher, G.2
Peterson, D.3
Filipski, A.4
Kumar, S.5
-
51
-
-
0038038468
-
Glycosylation motifs that direct arabinogalactan addition to arabinogalactan-proteins
-
Tan, L., Leykam, J. F., and Kieliszewski, M. J. (2003). Glycosylation motifs that direct arabinogalactan addition to arabinogalactan-proteins. Plant Physiol. 132, 1362-1369. doi: 10.1104/pp.103.021766
-
(2003)
Plant Physiol.
, vol.132
, pp. 1362-1369
-
-
Tan, L.1
Leykam, J.F.2
Kieliszewski, M.J.3
-
52
-
-
33747890192
-
The role of arabinogalactan proteins binding to Yariv reagents in the initiation, cell developmental fate, and maintenance of microspore embryogenesis in Brassica napus L. cv. Topas
-
Tang, X. C., He, Y.Q., Wang, Y., and Sun, M. X. (2006). The role of arabinogalactan proteins binding to Yariv reagents in the initiation, cell developmental fate, and maintenance of microspore embryogenesis in Brassica napus L. cv. Topas. J. Exp. Bot. 57, 2639-2650. doi: 10.1093/jxb/erl027
-
(2006)
J. Exp. Bot.
, vol.57
, pp. 2639-2650
-
-
Tang, X.C.1
He, Y.Q.2
Wang, Y.3
Sun, M.X.4
-
53
-
-
3142647502
-
The expression patterns of arabinogalactan-protein AtAGP30 and GLABRA2 reveal a role for abscisic acid in the early stages of root epidermal patterning
-
van Hengel, A. J., Barber, C., and Roberts, K. (2004). The expression patterns of arabinogalactan-protein AtAGP30 and GLABRA2 reveal a role for abscisic acid in the early stages of root epidermal patterning. Plant J. 39, 70-83. doi: 10.1111/j.1365-313X.2004.02104.x
-
(2004)
Plant J.
, vol.39
, pp. 70-83
-
-
van Hengel, A.J.1
Barber, C.2
Roberts, K.3
-
54
-
-
0142070917
-
AtAGP30, an arabinogalactan-protein in the cell walls of the primary root, plays a role in root regeneration and seed germination
-
van Hengel, A. J., and Roberts, K. (2003). AtAGP30, an arabinogalactan-protein in the cell walls of the primary root, plays a role in root regeneration and seed germination. Plant J. 36, 256-270. doi: 10.1046/j.1365-313X.2003.01874.x
-
(2003)
Plant J.
, vol.36
, pp. 256-270
-
-
van Hengel, A.J.1
Roberts, K.2
-
55
-
-
84862784141
-
Transcriptome analysis of rosette and folding leaves in Chinese cabbage using high-throughput RNA sequencing
-
Wang, F., Li, L., Li, H., Liu, L., Zhang, Y., Gao, J., et al. (2012). Transcriptome analysis of rosette and folding leaves in Chinese cabbage using high-throughput RNA sequencing. Genomics 99, 222-229. doi: 10.1016/j.ygeno.2012.02.005
-
(2012)
Genomics
, vol.99
, pp. 222-229
-
-
Wang, F.1
Li, L.2
Li, H.3
Liu, L.4
Zhang, Y.5
Gao, J.6
-
56
-
-
80053386792
-
The genome of the mesopolyploid crop species Brassica rapa
-
Wang, X., Wang, H., Wang, J., Sun, R., Wu, J., Liu, S., et al. (2011). The genome of the mesopolyploid crop species Brassica rapa. Nat. Genet. 43, 1035-1039. doi: 10.1038/ng.919
-
(2011)
Nat. Genet.
, vol.43
, pp. 1035-1039
-
-
Wang, X.1
Wang, H.2
Wang, J.3
Sun, R.4
Wu, J.5
Liu, S.6
-
57
-
-
57749119299
-
Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
-
Wang, Y., Zhang, W.-Z., Song, L.-F., Zou, J.-J., Su, Z., and Wu, W.-H. (2008). Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. Plant Physiol. 148, 1201-1211. doi: 10.1104/pp.108.126375
-
(2008)
Plant Physiol.
, vol.148
, pp. 1201-1211
-
-
Wang, Y.1
Zhang, W.-Z.2
Song, L.-F.3
Zou, J.-J.4
Su, Z.5
Wu, W.-H.6
-
58
-
-
85009141772
-
Phytohormones and their metabolic engineering for abiotic stress tolerance in crop plants
-
Wania, S. H., Kumarb, V., Shriramc, V., and Sah, S. K. (2016). Phytohormones and their metabolic engineering for abiotic stress tolerance in crop plants. Crop J. 4, 162-176. doi: 10.1007/978-94-017-7758-2_10
-
(2016)
Crop J.
, vol.4
, pp. 162-176
-
-
Wania, S.H.1
Kumarb, V.2
Shriramc, V.3
Sah, S.K.4
-
59
-
-
0030161749
-
A role for arabinogalactanproteins in plant cell expansion: Evidence from studies on the interaction of beta-glucosyl Yariv reagent with seedlings of Arabidopsis thaliana
-
Willats, W. G., and Knox, J. P. (1996). A role for arabinogalactanproteins in plant cell expansion: evidence from studies on the interaction of beta-glucosyl Yariv reagent with seedlings of Arabidopsis thaliana. Plant J. 9, 919-925. doi: 10.1046/j.1365-313X.1996.9060919.x
-
(1996)
Plant J.
, vol.9
, pp. 919-925
-
-
Willats, W.G.1
Knox, J.P.2
-
60
-
-
34547803197
-
PAML 4: Phylogenetic analysis by maximum likelihood
-
Yang, Z. (2007). PAML 4: phylogenetic analysis by maximum likelihood. Mol. Biol. Evol. 24, 1586-1591. doi: 10.1093/molbev/msm088
-
(2007)
Mol. Biol. Evol.
, vol.24
, pp. 1586-1591
-
-
Yang, Z.1
|