-
1
-
-
36649021589
-
Mucosa-associated bacterial diversity in relation to human terminal ileum and colonic biopsy samples
-
Ahmed, S., Macfarlane, G.T., Fite, A., McBain, A.J., Gilbert, P., Macfarlane, S., Mucosa-associated bacterial diversity in relation to human terminal ileum and colonic biopsy samples. Appl. Environ. Microbiol. 73 (2007), 7435–7442.
-
(2007)
Appl. Environ. Microbiol.
, vol.73
, pp. 7435-7442
-
-
Ahmed, S.1
Macfarlane, G.T.2
Fite, A.3
McBain, A.J.4
Gilbert, P.5
Macfarlane, S.6
-
2
-
-
80053393387
-
Physiology of consumption of human milk oligosaccharides by infant gut-associated bifidobacteria
-
Asakuma, S., Hatakeyama, E., Urashima, T., Yoshida, E., Katayama, T., Yamamoto, K., Kumagai, H., Ashida, H., Hirose, J., Kitaoka, M., Physiology of consumption of human milk oligosaccharides by infant gut-associated bifidobacteria. J. Biol. Chem. 286 (2011), 34583–34592.
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 34583-34592
-
-
Asakuma, S.1
Hatakeyama, E.2
Urashima, T.3
Yoshida, E.4
Katayama, T.5
Yamamoto, K.6
Kumagai, H.7
Ashida, H.8
Hirose, J.9
Kitaoka, M.10
-
3
-
-
79955116598
-
Structural insights into a unique cellulase fold and mechanism of cellulose hydrolysis
-
Bras, J.L., Cartmell, A., Carvalho, A.L., Verze, G., Bayer, E.A., Vazana, Y., Correia, M.A., Prates, J.A., Ratnaparkhe, S., Boraston, A.B., et al. Structural insights into a unique cellulase fold and mechanism of cellulose hydrolysis. Proc. Natl. Acad. Sci. USA 108 (2011), 5237–5242.
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 5237-5242
-
-
Bras, J.L.1
Cartmell, A.2
Carvalho, A.L.3
Verze, G.4
Bayer, E.A.5
Vazana, Y.6
Correia, M.A.7
Prates, J.A.8
Ratnaparkhe, S.9
Boraston, A.B.10
-
4
-
-
84875833187
-
Detection of bacterial 16S rRNA and identification of four clinically important bacteria by real-time PCR
-
Clifford, R.J., Milillo, M., Prestwood, J., Quintero, R., Zurawski, D.V., Kwak, Y.I., Waterman, P.E., Lesho, E.P., Mc Gann, P., Detection of bacterial 16S rRNA and identification of four clinically important bacteria by real-time PCR. PLoS One, 7, 2012, e48558.
-
(2012)
PLoS One
, vol.7
, pp. e48558
-
-
Clifford, R.J.1
Milillo, M.2
Prestwood, J.3
Quintero, R.4
Zurawski, D.V.5
Kwak, Y.I.6
Waterman, P.E.7
Lesho, E.P.8
Mc Gann, P.9
-
5
-
-
84892828465
-
Diet rapidly and reproducibly alters the human gut microbiome
-
David, L.A., Maurice, C.F., Carmody, R.N., Gootenberg, D.B., Button, J.E., Wolfe, B.E., Ling, A.V., Devlin, A.S., Varma, Y., Fischbach, M.A., et al. Diet rapidly and reproducibly alters the human gut microbiome. Nature 505 (2014), 559–563.
-
(2014)
Nature
, vol.505
, pp. 559-563
-
-
David, L.A.1
Maurice, C.F.2
Carmody, R.N.3
Gootenberg, D.B.4
Button, J.E.5
Wolfe, B.E.6
Ling, A.V.7
Devlin, A.S.8
Varma, Y.9
Fischbach, M.A.10
-
6
-
-
0037865396
-
Mapping the conformational itinerary of beta-glycosidases by X-ray crystallography
-
Davies, G.J., Ducros, V.M., Varrot, A., Zechel, D.L., Mapping the conformational itinerary of beta-glycosidases by X-ray crystallography. Biochem. Soc. Trans. 31 (2003), 523–527.
-
(2003)
Biochem. Soc. Trans.
, vol.31
, pp. 523-527
-
-
Davies, G.J.1
Ducros, V.M.2
Varrot, A.3
Zechel, D.L.4
-
7
-
-
77949535720
-
Features and development of Coot
-
Emsley, P., Lohkamp, B., Scott, W.G., Cowtan, K., Features and development of Coot. Acta Crystallogr. D Biol. Crystallogr. 66 (2010), 486–501.
-
(2010)
Acta Crystallogr. D Biol. Crystallogr.
, vol.66
, pp. 486-501
-
-
Emsley, P.1
Lohkamp, B.2
Scott, W.G.3
Cowtan, K.4
-
8
-
-
79251584066
-
Bifidobacteria can protect from enteropathogenic infection through production of acetate
-
Fukuda, S., Toh, H., Hase, K., Oshima, K., Nakanishi, Y., Yoshimura, K., Tobe, T., Clarke, J.M., Topping, D.L., Suzuki, T., et al. Bifidobacteria can protect from enteropathogenic infection through production of acetate. Nature 469 (2011), 543–547.
-
(2011)
Nature
, vol.469
, pp. 543-547
-
-
Fukuda, S.1
Toh, H.2
Hase, K.3
Oshima, K.4
Nakanishi, Y.5
Yoshimura, K.6
Tobe, T.7
Clarke, J.M.8
Topping, D.L.9
Suzuki, T.10
-
9
-
-
84992021815
-
A novel gene cluster allows preferential utilization of fucosylated milk oligosaccharides in Bifidobacterium longum subsp. longum SC596
-
Garrido, D., Ruiz-Moyano, S., Kirmiz, N., Davis, J.C., Totten, S.M., Lemay, D.G., Ugalde, J.A., German, J.B., Lebrilla, C.B., Mills, D.A., A novel gene cluster allows preferential utilization of fucosylated milk oligosaccharides in Bifidobacterium longum subsp. longum SC596. Sci. Rep., 6, 2016, 35045.
-
(2016)
Sci. Rep.
, vol.6
, pp. 35045
-
-
Garrido, D.1
Ruiz-Moyano, S.2
Kirmiz, N.3
Davis, J.C.4
Totten, S.M.5
Lemay, D.G.6
Ugalde, J.A.7
German, J.B.8
Lebrilla, C.B.9
Mills, D.A.10
-
10
-
-
84963940962
-
Novel substrate specificities of two lacto-N-biosidases towards beta-linked galacto-N-biose-containing oligosaccharides of globo H, Gb5, and GA1
-
Gotoh, A., Katoh, T., Sugiyama, Y., Kurihara, S., Honda, Y., Sakurama, H., Kambe, T., Ashida, H., Kitaoka, M., Yamamoto, K., et al. Novel substrate specificities of two lacto-N-biosidases towards beta-linked galacto-N-biose-containing oligosaccharides of globo H, Gb5, and GA1. Carbohydr. Res. 408 (2015), 18–24.
-
(2015)
Carbohydr. Res.
, vol.408
, pp. 18-24
-
-
Gotoh, A.1
Katoh, T.2
Sugiyama, Y.3
Kurihara, S.4
Honda, Y.5
Sakurama, H.6
Kambe, T.7
Ashida, H.8
Kitaoka, M.9
Yamamoto, K.10
-
11
-
-
84944399006
-
Structural analysis of a family 101 glycoside hydrolase in complex with carbohydrates reveals insights into its mechanism
-
Gregg, K.J., Suits, M.D., Deng, L., Vocadlo, D.J., Boraston, A.B., Structural analysis of a family 101 glycoside hydrolase in complex with carbohydrates reveals insights into its mechanism. J. Biol. Chem. 290 (2015), 25657–25669.
-
(2015)
J. Biol. Chem.
, vol.290
, pp. 25657-25669
-
-
Gregg, K.J.1
Suits, M.D.2
Deng, L.3
Vocadlo, D.J.4
Boraston, A.B.5
-
12
-
-
84861417998
-
Development of tools to study lacto-N-biosidase: an important enzyme involved in the breakdown of human milk oligosaccharides
-
Hattie, M., Debowski, A.W., Stubbs, K.A., Development of tools to study lacto-N-biosidase: an important enzyme involved in the breakdown of human milk oligosaccharides. ChemBioChem 13 (2012), 1128–1131.
-
(2012)
ChemBioChem
, vol.13
, pp. 1128-1131
-
-
Hattie, M.1
Debowski, A.W.2
Stubbs, K.A.3
-
13
-
-
84942903534
-
Gaining insight into the catalysis by GH20 lacto-N-biosidase using small molecule inhibitors and structural analysis
-
Hattie, M., Ito, T., Debowski, A.W., Arakawa, T., Katayama, T., Yamamoto, K., Fushinobu, S., Stubbs, K.A., Gaining insight into the catalysis by GH20 lacto-N-biosidase using small molecule inhibitors and structural analysis. Chem. Commun. 51 (2015), 15008–15011.
-
(2015)
Chem. Commun.
, vol.51
, pp. 15008-15011
-
-
Hattie, M.1
Ito, T.2
Debowski, A.W.3
Arakawa, T.4
Katayama, T.5
Yamamoto, K.6
Fushinobu, S.7
Stubbs, K.A.8
-
14
-
-
84863734797
-
Development of a double-crossover markerless gene deletion system in Bifidobacterium longum: functional analysis of the α-galactosidase gene for raffinose assimilation
-
Hirayama, Y., Sakanaka, M., Fukuma, H., Murayama, H., Kano, Y., Fukiya, S., Yokota, A., Development of a double-crossover markerless gene deletion system in Bifidobacterium longum: functional analysis of the α-galactosidase gene for raffinose assimilation. Appl. Environ. Microbiol. 78 (2012), 4984–4994.
-
(2012)
Appl. Environ. Microbiol.
, vol.78
, pp. 4984-4994
-
-
Hirayama, Y.1
Sakanaka, M.2
Fukuma, H.3
Murayama, H.4
Kano, Y.5
Fukiya, S.6
Yokota, A.7
-
15
-
-
0025366497
-
Data bank of three-dimensional structures of disaccharides, a tool to build 3-D structures of oligosaccharides
-
Imberty, A., Gerber, S., Tran, V., Pérez, S., Data bank of three-dimensional structures of disaccharides, a tool to build 3-D structures of oligosaccharides. Glycoconj. J. 7 (1990), 27–54.
-
(1990)
Glycoconj. J.
, vol.7
, pp. 27-54
-
-
Imberty, A.1
Gerber, S.2
Tran, V.3
Pérez, S.4
-
16
-
-
84876951604
-
Crystal structures of a glycoside hydrolase family 20 lacto-N-biosidase from Bifidobacterium bifidum
-
Ito, T., Katayama, T., Hattie, M., Sakurama, H., Wada, J., Suzuki, R., Ashida, H., Wakagi, T., Yamamoto, K., Stubbs, K.A., et al. Crystal structures of a glycoside hydrolase family 20 lacto-N-biosidase from Bifidobacterium bifidum. J. Biol. Chem. 288 (2013), 11795–11806.
-
(2013)
J. Biol. Chem.
, vol.288
, pp. 11795-11806
-
-
Ito, T.1
Katayama, T.2
Hattie, M.3
Sakurama, H.4
Wada, J.5
Suzuki, R.6
Ashida, H.7
Wakagi, T.8
Yamamoto, K.9
Stubbs, K.A.10
-
17
-
-
85005939400
-
Complete genome sequence of Bifidobacterium longum 105–a, a strain with high transformation efficiency
-
Kanesaki, Y., Masutani, H., Sakanaka, M., Shiwa, Y., Fujisawa, T., Nakamura, Y., Yokota, A., Fukiya, S., Suzuki, T., Yoshikawa, H., Complete genome sequence of Bifidobacterium longum 105–a, a strain with high transformation efficiency. Genome Announc., 2, 2014, 10.1128/genomeA.01311-14.
-
(2014)
Genome Announc.
, vol.2
-
-
Kanesaki, Y.1
Masutani, H.2
Sakanaka, M.3
Shiwa, Y.4
Fujisawa, T.5
Nakamura, Y.6
Yokota, A.7
Fukiya, S.8
Suzuki, T.9
Yoshikawa, H.10
-
18
-
-
84962193070
-
Host-derived glycans serve as selected nutrients for the gut microbe: human milk oligosaccharides and bifidobacteria
-
Katayama, T., Host-derived glycans serve as selected nutrients for the gut microbe: human milk oligosaccharides and bifidobacteria. Biosci. Biotechnol. Biochem. 80 (2016), 621–632.
-
(2016)
Biosci. Biotechnol. Biochem.
, vol.80
, pp. 621-632
-
-
Katayama, T.1
-
19
-
-
20444393045
-
Novel putative galactose operon involving lacto-N-biose phosphorylase in Bifidobacterium longum
-
Kitaoka, M., Tian, J., Nishimoto, M., Novel putative galactose operon involving lacto-N-biose phosphorylase in Bifidobacterium longum. Appl. Environ. Microbiol. 71 (2005), 3158–3162.
-
(2005)
Appl. Environ. Microbiol.
, vol.71
, pp. 3158-3162
-
-
Kitaoka, M.1
Tian, J.2
Nishimoto, M.3
-
20
-
-
77957868691
-
Structures and application of oligosaccharides in human milk
-
Kobata, A., Structures and application of oligosaccharides in human milk. Proc. Jpn. Acad. Ser. B Phys. Biol. Sci. 86 (2010), 731–747.
-
(2010)
Proc. Jpn. Acad. Ser. B Phys. Biol. Sci.
, vol.86
, pp. 731-747
-
-
Kobata, A.1
-
21
-
-
0037189899
-
The active site of cellobiohydrolase Cel6A from Trichoderma reesei: the roles of aspartic acids D221 and D175
-
Koivula, A., Ruohonen, L., Wohlfahrt, G., Reinikainen, T., Teeri, T.T., Piens, K., Claeyssens, M., Weber, M., Vasella, A., Becker, D., et al. The active site of cellobiohydrolase Cel6A from Trichoderma reesei: the roles of aspartic acids D221 and D175. J. Am. Chem. Soc. 124 (2002), 10015–10024.
-
(2002)
J. Am. Chem. Soc.
, vol.124
, pp. 10015-10024
-
-
Koivula, A.1
Ruohonen, L.2
Wohlfahrt, G.3
Reinikainen, T.4
Teeri, T.T.5
Piens, K.6
Claeyssens, M.7
Weber, M.8
Vasella, A.9
Becker, D.10
-
22
-
-
0033826695
-
Oligosaccharides in human milk: structural, functional, and metabolic aspects
-
Kunz, C., Rudloff, S., Baier, W., Klein, N., Strobel, S., Oligosaccharides in human milk: structural, functional, and metabolic aspects. Annu. Rev. Nutr. 20 (2000), 699–722.
-
(2000)
Annu. Rev. Nutr.
, vol.20
, pp. 699-722
-
-
Kunz, C.1
Rudloff, S.2
Baier, W.3
Klein, N.4
Strobel, S.5
-
23
-
-
84860290638
-
JLigand: a graphical tool for the CCP4 template-restraint library
-
Lebedev, A.A., Young, P., Isupov, M.N., Moroz, O.V., Vagin, A.A., Murshudov, G.N., JLigand: a graphical tool for the CCP4 template-restraint library. Acta Crystallogr. D Biol. Crystallogr. 68 (2012), 431–440.
-
(2012)
Acta Crystallogr. D Biol. Crystallogr.
, vol.68
, pp. 431-440
-
-
Lebedev, A.A.1
Young, P.2
Isupov, M.N.3
Moroz, O.V.4
Vagin, A.A.5
Murshudov, G.N.6
-
24
-
-
67649884743
-
Fast and accurate short read alignment with Burrows-Wheeler transform
-
Li, H., Durbin, R., Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25 (2009), 1754–1760.
-
(2009)
Bioinformatics
, vol.25
, pp. 1754-1760
-
-
Li, H.1
Durbin, R.2
-
25
-
-
84891763855
-
The carbohydrate-active enzymes database (CAZy) in 2013
-
Lombard, V., Golaconda Ramulu, H., Drula, E., Coutinho, P.M., Henrissat, B., The carbohydrate-active enzymes database (CAZy) in 2013. Nucleic Acids Res. 42 (2014), D490–D495.
-
(2014)
Nucleic Acids Res.
, vol.42
, pp. D490-D495
-
-
Lombard, V.1
Golaconda Ramulu, H.2
Drula, E.3
Coutinho, P.M.4
Henrissat, B.5
-
26
-
-
0035971079
-
Crystallographic evidence for substrate-assisted catalysis in a bacterial beta-hexosaminidase
-
Mark, B.L., Vocadlo, D.J., Knapp, S., Triggs-Raine, B.L., Withers, S.G., James, M.N., Crystallographic evidence for substrate-assisted catalysis in a bacterial beta-hexosaminidase. J. Biol. Chem. 276 (2001), 10330–10337.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 10330-10337
-
-
Mark, B.L.1
Vocadlo, D.J.2
Knapp, S.3
Triggs-Raine, B.L.4
Withers, S.G.5
James, M.N.6
-
27
-
-
84976385531
-
A key genetic factor for fucosyllactose utilization affects infant gut microbiota development
-
Matsuki, T., Yahagi, K., Mori, H., Matsumoto, H., Hara, T., Tajima, S., Ogawa, E., Kodama, H., Yamamoto, K., Yamada, T., et al. A key genetic factor for fucosyllactose utilization affects infant gut microbiota development. Nat. Commun., 7, 2016, 11939.
-
(2016)
Nat. Commun.
, vol.7
, pp. 11939
-
-
Matsuki, T.1
Yahagi, K.2
Mori, H.3
Matsumoto, H.4
Hara, T.5
Tajima, S.6
Ogawa, E.7
Kodama, H.8
Yamamoto, K.9
Yamada, T.10
-
28
-
-
0001690120
-
Carbohydrates in milk
-
R.G. Jensen Academic Press
-
Newburg, D.S., Neubauer, S.H., Carbohydrates in milk. Jensen, R.G., (eds.) Handbook of Milk Composition, 1995, Academic Press, 273–349.
-
(1995)
Handbook of Milk Composition
, pp. 273-349
-
-
Newburg, D.S.1
Neubauer, S.H.2
-
29
-
-
35548975958
-
Practical preparation of lacto-N-biose I, a candidate for the bifidus factor in human milk
-
Nishimoto, M., Kitaoka, M., Practical preparation of lacto-N-biose I, a candidate for the bifidus factor in human milk. Biosci. Biotechnol. Biochem. 71 (2007), 2101–2104.
-
(2007)
Biosci. Biotechnol. Biochem.
, vol.71
, pp. 2101-2104
-
-
Nishimoto, M.1
Kitaoka, M.2
-
30
-
-
71549147182
-
One-pot enzymatic production of beta-D-galactopyranosyl-(1–>3)-2-acetamido-2-deoxy-D-galactose (galacto-N-biose) from sucrose and 2-acetamido-2-deoxy-D-galactose (N-acetylgalactosamine)
-
Nishimoto, M., Kitaoka, M., One-pot enzymatic production of beta-D-galactopyranosyl-(1–>3)-2-acetamido-2-deoxy-D-galactose (galacto-N-biose) from sucrose and 2-acetamido-2-deoxy-D-galactose (N-acetylgalactosamine). Carbohydr. Res. 344 (2009), 2573–2576.
-
(2009)
Carbohydr. Res.
, vol.344
, pp. 2573-2576
-
-
Nishimoto, M.1
Kitaoka, M.2
-
31
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinowski, Z., Minor, W., Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol. 276 (1997), 307–326.
-
(1997)
Methods Enzymol.
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
32
-
-
33748415364
-
Factors influencing the composition of the intestinal microbiota in early infancy
-
Penders, J., Thijs, C., Vink, C., Stelma, F.F., Snijders, B., Kummeling, I., van den Brandt, P.A., Stobberingh, E.E., Factors influencing the composition of the intestinal microbiota in early infancy. Pediatrics 118 (2006), 511–521.
-
(2006)
Pediatrics
, vol.118
, pp. 511-521
-
-
Penders, J.1
Thijs, C.2
Vink, C.3
Stelma, F.F.4
Snijders, B.5
Kummeling, I.6
van den Brandt, P.A.7
Stobberingh, E.E.8
-
33
-
-
0034647424
-
Structures of chitobiase mutants complexed with the substrate Di-N-acetyl-D-glucosamine: the catalytic role of the conserved acidic pair, aspartate 539 and glutamate 540
-
Prag, G., Papanikolau, Y., Tavlas, G., Vorgias, C.E., Petratos, K., Oppenheim, A.B., Structures of chitobiase mutants complexed with the substrate Di-N-acetyl-D-glucosamine: the catalytic role of the conserved acidic pair, aspartate 539 and glutamate 540. J. Mol. Biol. 300 (2000), 611–617.
-
(2000)
J. Mol. Biol.
, vol.300
, pp. 611-617
-
-
Prag, G.1
Papanikolau, Y.2
Tavlas, G.3
Vorgias, C.E.4
Petratos, K.5
Oppenheim, A.B.6
-
34
-
-
0037163875
-
Beta-helical catalytic domains in glycoside hydrolase families 49, 55 and 87: domain architecture, modelling and assignment of catalytic residues
-
Rigden, D.J., Franco, O.L., Beta-helical catalytic domains in glycoside hydrolase families 49, 55 and 87: domain architecture, modelling and assignment of catalytic residues. FEBS Lett. 530 (2002), 225–232.
-
(2002)
FEBS Lett.
, vol.530
, pp. 225-232
-
-
Rigden, D.J.1
Franco, O.L.2
-
35
-
-
15944421775
-
Culture-independent analysis of fecal microbiota in infants, with special reference to Bifidobacterium species
-
Sakata, S., Tonooka, T., Ishizeki, S., Takada, M., Sakamoto, M., Fukuyama, M., Benno, Y., Culture-independent analysis of fecal microbiota in infants, with special reference to Bifidobacterium species. FEMS Microbiol. Lett. 243 (2005), 417–423.
-
(2005)
FEMS Microbiol. Lett.
, vol.243
, pp. 417-423
-
-
Sakata, S.1
Tonooka, T.2
Ishizeki, S.3
Takada, M.4
Sakamoto, M.5
Fukuyama, M.6
Benno, Y.7
-
36
-
-
84883435173
-
Lacto-N-biosidase encoded by a novel gene of Bifidobacterium longum subspecies longum shows unique substrate specificity and requires a designated chaperone for its active expression
-
Sakurama, H., Kiyohara, M., Wada, J., Honda, Y., Yamaguchi, M., Fukiya, S., Yokota, A., Ashida, H., Kumagai, H., Kitaoka, M., et al. Lacto-N-biosidase encoded by a novel gene of Bifidobacterium longum subspecies longum shows unique substrate specificity and requires a designated chaperone for its active expression. J. Biol. Chem. 288 (2013), 25194–25206.
-
(2013)
J. Biol. Chem.
, vol.288
, pp. 25194-25206
-
-
Sakurama, H.1
Kiyohara, M.2
Wada, J.3
Honda, Y.4
Yamaguchi, M.5
Fukiya, S.6
Yokota, A.7
Ashida, H.8
Kumagai, H.9
Kitaoka, M.10
-
37
-
-
0027164497
-
Purification and characterization of an enzyme releasing lacto-N-biose from oligosaccharides with type 1 chain
-
Sano, M., Hayakawa, K., Kato, I., Purification and characterization of an enzyme releasing lacto-N-biose from oligosaccharides with type 1 chain. J. Biol. Chem. 268 (1993), 18560–18566.
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 18560-18566
-
-
Sano, M.1
Hayakawa, K.2
Kato, I.3
-
38
-
-
84860450398
-
A metagenomic study of diet-dependent interaction between gut microbiota and host in infants reveals differences in immune response
-
Schwartz, S., Friedberg, I., Ivanov, I.V., Davidson, L.A., Goldsby, J.S., Dahl, D.B., Herman, D., Wang, M., Donovan, S.M., Chapkin, R.S., A metagenomic study of diet-dependent interaction between gut microbiota and host in infants reveals differences in immune response. Genome Biol., 13, 2012, r32.
-
(2012)
Genome Biol.
, vol.13
, pp. r32
-
-
Schwartz, S.1
Friedberg, I.2
Ivanov, I.V.3
Davidson, L.A.4
Goldsby, J.S.5
Dahl, D.B.6
Herman, D.7
Wang, M.8
Donovan, S.M.9
Chapkin, R.S.10
-
39
-
-
77954142215
-
Nursing our microbiota: molecular linkages between bifidobacteria and milk oligosaccharides
-
Sela, D.A., Mills, D.A., Nursing our microbiota: molecular linkages between bifidobacteria and milk oligosaccharides. Trends Microbiol. 18 (2010), 298–307.
-
(2010)
Trends Microbiol.
, vol.18
, pp. 298-307
-
-
Sela, D.A.1
Mills, D.A.2
-
40
-
-
45149087204
-
Structural and thermodynamic analyses of solute-binding Protein from Bifidobacterium longum specific for core 1 disaccharide and lacto-N-biose I
-
Suzuki, R., Wada, J., Katayama, T., Fushinobu, S., Wakagi, T., Shoun, H., Sugimoto, H., Tanaka, A., Kumagai, H., Ashida, H., et al. Structural and thermodynamic analyses of solute-binding Protein from Bifidobacterium longum specific for core 1 disaccharide and lacto-N-biose I. J. Biol. Chem. 283 (2008), 13165–13173.
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 13165-13173
-
-
Suzuki, R.1
Wada, J.2
Katayama, T.3
Fushinobu, S.4
Wakagi, T.5
Shoun, H.6
Sugimoto, H.7
Tanaka, A.8
Kumagai, H.9
Ashida, H.10
-
41
-
-
84876312229
-
Comparison of the compositions of the stool microbiotas of infants fed goat milk formula, cow milk-based formula, or breast milk
-
Tannock, G.W., Lawley, B., Munro, K., Gowri Pathmanathan, S., Zhou, S.J., Makrides, M., Gibson, R.A., Sullivan, T., Prosser, C.G., Lowry, D., et al. Comparison of the compositions of the stool microbiotas of infants fed goat milk formula, cow milk-based formula, or breast milk. Appl. Environ. Microbiol. 79 (2013), 3040–3048.
-
(2013)
Appl. Environ. Microbiol.
, vol.79
, pp. 3040-3048
-
-
Tannock, G.W.1
Lawley, B.2
Munro, K.3
Gowri Pathmanathan, S.4
Zhou, S.J.5
Makrides, M.6
Gibson, R.A.7
Sullivan, T.8
Prosser, C.G.9
Lowry, D.10
-
43
-
-
76149120388
-
AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading
-
Trott, O., Olson, A.J., AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading. J. Comput. Chem. 31 (2010), 455–461.
-
(2010)
J. Comput. Chem.
, vol.31
, pp. 455-461
-
-
Trott, O.1
Olson, A.J.2
-
44
-
-
84866787871
-
The predominance of type I oligosaccharides is a feature specific to human breast milk
-
Urashima, T., Asakuma, S., Leo, F., Fukuda, K., Messer, M., Oftedal, O.T., The predominance of type I oligosaccharides is a feature specific to human breast milk. Adv. Nutr. 3 (2012), 473S–482S.
-
(2012)
Adv. Nutr.
, vol.3
, pp. 473S-482S
-
-
Urashima, T.1
Asakuma, S.2
Leo, F.3
Fukuda, K.4
Messer, M.5
Oftedal, O.T.6
-
45
-
-
0004106191
-
Essentials of Glycobiology
-
Cold Spring Harbor Laboratory Press
-
Variki, A., Cummings, R., Esko, J., Freeze, H., Hart, G., Marth, J.D., Essentials of Glycobiology. 1999, Cold Spring Harbor Laboratory Press.
-
(1999)
-
-
Variki, A.1
Cummings, R.2
Esko, J.3
Freeze, H.4
Hart, G.5
Marth, J.D.6
-
46
-
-
46949088952
-
Bifidobacterium bifidum lacto-N-biosidase, a critical enzyme for the degradation of human milk oligosaccharides with a type 1 structure
-
Wada, J., Ando, T., Kiyohara, M., Ashida, H., Kitaoka, M., Yamaguchi, M., Kumagai, H., Katayama, T., Yamamoto, K., Bifidobacterium bifidum lacto-N-biosidase, a critical enzyme for the degradation of human milk oligosaccharides with a type 1 structure. Appl. Environ. Microbiol. 74 (2008), 3996–4004.
-
(2008)
Appl. Environ. Microbiol.
, vol.74
, pp. 3996-4004
-
-
Wada, J.1
Ando, T.2
Kiyohara, M.3
Ashida, H.4
Kitaoka, M.5
Yamaguchi, M.6
Kumagai, H.7
Katayama, T.8
Yamamoto, K.9
-
47
-
-
76149098836
-
Distribution of in vitro fermentation ability of lacto-N-biose I, a major building block of human milk oligosaccharides, in bifidobacterial strains
-
Xiao, J.Z., Takahashi, S., Nishimoto, M., Odamaki, T., Yaeshima, T., Iwatsuki, K., Kitaoka, M., Distribution of in vitro fermentation ability of lacto-N-biose I, a major building block of human milk oligosaccharides, in bifidobacterial strains. Appl. Environ. Microbiol. 76 (2010), 54–59.
-
(2010)
Appl. Environ. Microbiol.
, vol.76
, pp. 54-59
-
-
Xiao, J.Z.1
Takahashi, S.2
Nishimoto, M.3
Odamaki, T.4
Yaeshima, T.5
Iwatsuki, K.6
Kitaoka, M.7
-
48
-
-
0029257535
-
Protein motifs. 3. The parallel beta helix and other coiled folds
-
Yoder, M.D., Jurnak, F., Protein motifs. 3. The parallel beta helix and other coiled folds. FASEB J. 9 (1995), 335–342.
-
(1995)
FASEB J.
, vol.9
, pp. 335-342
-
-
Yoder, M.D.1
Jurnak, F.2
|