-
1
-
-
0035845511
-
Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications
-
Sørlie T, Perou CM, Tibshirani R, et al. Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications. Proc Natl Acad Sci USA 2001; 98: 10869–10874.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 10869-10874
-
-
Sørlie, T.1
Perou, C.M.2
Tibshirani, R.3
-
2
-
-
33750966349
-
Gene expression profiling reveals reproducible human lung adenocarcinoma subtypes in multiple independent patient cohorts
-
Hayes DN, Monti S, Parmigiani G, et al. Gene expression profiling reveals reproducible human lung adenocarcinoma subtypes in multiple independent patient cohorts. J Clin Oncol 2006; 24: 5079–5090.
-
(2006)
J Clin Oncol
, vol.24
, pp. 5079-5090
-
-
Hayes, D.N.1
Monti, S.2
Parmigiani, G.3
-
3
-
-
84878302099
-
Gene expression classification of colon cancer into molecular subtypes: characterization, validation, and prognostic value
-
Marisa L, de Reyniès A, Duval A, et al. Gene expression classification of colon cancer into molecular subtypes: characterization, validation, and prognostic value. PLoS Med 2013; 10: e1001453.
-
(2013)
PLoS Med
, vol.10
-
-
Marisa, L.1
de Reyniès, A.2
Duval, A.3
-
4
-
-
84990825826
-
Bladder cancer molecular taxonomy: summary from a consensus meeting
-
Lerner SP, McConkey DJ, Hoadley KA, et al. Bladder cancer molecular taxonomy: summary from a consensus meeting. Bladder Cancer 2016; 2: 37–47.
-
(2016)
Bladder Cancer
, vol.2
, pp. 37-47
-
-
Lerner, S.P.1
McConkey, D.J.2
Hoadley, K.A.3
-
5
-
-
84862027456
-
Integrated genomic and gene expression profiling identifies two major genomic circuits in urothelial carcinoma
-
Lindgren D, Sjödahl G, Lauss M, et al. Integrated genomic and gene expression profiling identifies two major genomic circuits in urothelial carcinoma. PLoS One 2012; 7: e38863.
-
(2012)
PLoS One
, vol.7
-
-
Lindgren, D.1
Sjödahl, G.2
Lauss, M.3
-
6
-
-
84942984987
-
A molecular pathologic framework for risk stratification of stage T1 urothelial carcinoma
-
discussion 835-836
-
Patschan O, Sjödahl G, Chebil G, et al. A molecular pathologic framework for risk stratification of stage T1 urothelial carcinoma. Eur Urol 2015; 68: 824–832; discussion 835-836.
-
(2015)
Eur Urol
, vol.68
, pp. 824-832
-
-
Patschan, O.1
Sjödahl, G.2
Chebil, G.3
-
7
-
-
84862576866
-
A molecular taxonomy for urothelial carcinoma
-
Sjödahl G, Lauss M, Lövgren K, et al. A molecular taxonomy for urothelial carcinoma. Clin Cancer Res 2012; 18: 3377–3386.
-
(2012)
Clin Cancer Res
, vol.18
, pp. 3377-3386
-
-
Sjödahl, G.1
Lauss, M.2
Lövgren, K.3
-
8
-
-
84883162217
-
Toward a molecular pathologic classification of urothelial carcinoma
-
Sjödahl G, Lövgren K, Lauss M, et al. Toward a molecular pathologic classification of urothelial carcinoma. Am J Pathol 2013; 183: 681–691.
-
(2013)
Am J Pathol
, vol.183
, pp. 681-691
-
-
Sjödahl, G.1
Lövgren, K.2
Lauss, M.3
-
9
-
-
84893520397
-
Identification of distinct basal and luminal subtypes of muscle-invasive bladder cancer with different sensitivities to frontline chemotherapy
-
Choi W, Porten S, Kim S, et al. Identification of distinct basal and luminal subtypes of muscle-invasive bladder cancer with different sensitivities to frontline chemotherapy. Cancer Cell 2014; 25: 152–165.
-
(2014)
Cancer Cell
, vol.25
, pp. 152-165
-
-
Choi, W.1
Porten, S.2
Kim, S.3
-
10
-
-
84896844735
-
Intrinsic subtypes of high-grade bladder cancer reflect the hallmarks of breast cancer biology
-
Damrauer JS, Hoadley KA, Chism DD, et al. Intrinsic subtypes of high-grade bladder cancer reflect the hallmarks of breast cancer biology. Proc Natl Acad Sci USA 2014; 111: 3110–3115.
-
(2014)
Proc Natl Acad Sci USA
, vol.111
, pp. 3110-3115
-
-
Damrauer, J.S.1
Hoadley, K.A.2
Chism, D.D.3
-
11
-
-
84897022815
-
Comprehensive molecular characterization of urothelial bladder carcinoma
-
Cancer Genome Atlas Research Network. Comprehensive molecular characterization of urothelial bladder carcinoma. Nature 2014; 507: 315–322.
-
(2014)
Nature
, vol.507
, pp. 315-322
-
-
-
12
-
-
84904479838
-
EGFR as a potential therapeutic target for a subset of muscle-invasive bladder cancers presenting a basal-like phenotype
-
Rebouissou S, Bernard-Pierrot I, de Reyniès A, et al. EGFR as a potential therapeutic target for a subset of muscle-invasive bladder cancers presenting a basal-like phenotype. Sci Transl Med 2014; 6: 244ra291.
-
(2014)
Sci Transl Med
, vol.6
, pp. 244ra291
-
-
Rebouissou, S.1
Bernard-Pierrot, I.2
de Reyniès, A.3
-
13
-
-
84979732333
-
Comprehensive transcriptional analysis of early-stage urothelial carcinoma
-
Hedegaard J, Lamy P, Nordentoft I, et al. Comprehensive transcriptional analysis of early-stage urothelial carcinoma. Cancer Cell 2016; 30: 27–42.
-
(2016)
Cancer Cell
, vol.30
, pp. 27-42
-
-
Hedegaard, J.1
Lamy, P.2
Nordentoft, I.3
-
14
-
-
84930959056
-
Biological determinants of bladder cancer gene expression subtypes
-
Aine M, Eriksson P, Liedberg F, et al. Biological determinants of bladder cancer gene expression subtypes. Sci Rep 2015; 5: 10957.
-
(2015)
Sci Rep
, vol.5
, pp. 10957
-
-
Aine, M.1
Eriksson, P.2
Liedberg, F.3
-
15
-
-
33845432928
-
Adjusting batch effects in microarray expression data using empirical Bayes methods
-
Johnson WE, Li C, Rabinovic A. Adjusting batch effects in microarray expression data using empirical Bayes methods. Biostatistics 2007; 8: 118–127.
-
(2007)
Biostatistics
, vol.8
, pp. 118-127
-
-
Johnson, W.E.1
Li, C.2
Rabinovic, A.3
-
16
-
-
80052765911
-
Immunohistochemical profile of urothelial and small cell carcinomas of the bladder
-
Fernández-Acenero MJ, Cordova S, Manzarbeitia F, et al. Immunohistochemical profile of urothelial and small cell carcinomas of the bladder. Pathol Oncol Res 2011; 17: 519–523.
-
(2011)
Pathol Oncol Res
, vol.17
, pp. 519-523
-
-
Fernández-Acenero, M.J.1
Cordova, S.2
Manzarbeitia, F.3
-
17
-
-
1942437006
-
Activation of peroxisome proliferator-activated receptor-gamma reverses squamous metaplasia and induces transitional differentiation in normal human urothelial cells
-
Varley CL, Stahlschmidt J, Smith B, et al. Activation of peroxisome proliferator-activated receptor-gamma reverses squamous metaplasia and induces transitional differentiation in normal human urothelial cells. Am J Pathol 2004; 164: 1789–1798.
-
(2004)
Am J Pathol
, vol.164
, pp. 1789-1798
-
-
Varley, C.L.1
Stahlschmidt, J.2
Smith, B.3
-
18
-
-
57649215886
-
FOXA1 and IRF-1 intermediary transcriptional regulators of PPARgamma-induced urothelial cytodifferentiation
-
Varley CL, Bacon EJ, Holder JC, et al. FOXA1 and IRF-1 intermediary transcriptional regulators of PPARgamma-induced urothelial cytodifferentiation. Cell Death Differ 2009; 16: 103–114.
-
(2009)
Cell Death Differ
, vol.16
, pp. 103-114
-
-
Varley, C.L.1
Bacon, E.J.2
Holder, J.C.3
-
19
-
-
77955368268
-
All-trans retinoic acid directs urothelial specification of murine embryonic stem cells via GATA4/6 signaling mechanisms
-
Mauney JR, Ramachandran A, Yu RN, et al. All-trans retinoic acid directs urothelial specification of murine embryonic stem cells via GATA4/6 signaling mechanisms. PLoS One 2010; 5: e11513.
-
(2010)
PLoS One
, vol.5
-
-
Mauney, J.R.1
Ramachandran, A.2
Yu, R.N.3
-
20
-
-
84880696798
-
When urothelial differentiation pathways go wrong: implications for bladder cancer development and progression
-
DeGraff DJ, Cates JM, Mauney JR, et al. When urothelial differentiation pathways go wrong: implications for bladder cancer development and progression. Urol Oncol 2013; 31: 802–811.
-
(2013)
Urol Oncol
, vol.31
, pp. 802-811
-
-
DeGraff, D.J.1
Cates, J.M.2
Mauney, J.R.3
-
21
-
-
84892878110
-
Identification of ELF3 as an early transcriptional regulator of human urothelium
-
Böck M, Hinley J, Schmitt C, et al. Identification of ELF3 as an early transcriptional regulator of human urothelium. Dev Biol 2014; 386: 321–330.
-
(2014)
Dev Biol
, vol.386
, pp. 321-330
-
-
Böck, M.1
Hinley, J.2
Schmitt, C.3
-
22
-
-
0033933214
-
Grading the invasive component of urothelial carcinoma of the bladder and its relationship with progression-free survival
-
Jimenez RE, Gheiler E, Oskanian P, et al. Grading the invasive component of urothelial carcinoma of the bladder and its relationship with progression-free survival. Am J Surg Pathol 2000; 24: 980–987.
-
(2000)
Am J Surg Pathol
, vol.24
, pp. 980-987
-
-
Jimenez, R.E.1
Gheiler, E.2
Oskanian, P.3
-
23
-
-
84930208685
-
Molecular subtypes of urothelial carcinoma are defined by specific gene regulatory systems
-
Eriksson P, Aine M, Veerla S, et al. Molecular subtypes of urothelial carcinoma are defined by specific gene regulatory systems. BMC Med Genomics 2015; 8: 25.
-
(2015)
BMC Med Genomics
, vol.8
, pp. 25
-
-
Eriksson, P.1
Aine, M.2
Veerla, S.3
-
24
-
-
0029093135
-
Cytokeratin 20 expression by non-invasive transitional cell carcinomas: potential for distinguishing recurrent from non-recurrent disease
-
Harnden P, Allam A, Joyce AD, et al. Cytokeratin 20 expression by non-invasive transitional cell carcinomas: potential for distinguishing recurrent from non-recurrent disease. Histopathology 1995; 27: 169–174.
-
(1995)
Histopathology
, vol.27
, pp. 169-174
-
-
Harnden, P.1
Allam, A.2
Joyce, A.D.3
-
25
-
-
0032520891
-
Uroplakin II gene is expressed in transitional cell carcinoma but not in bilharzial bladder squamous cell carcinoma: alternative pathways of bladder epithelial differentiation and tumor formation
-
Wu RL, Osman I, Wu XR, et al. Uroplakin II gene is expressed in transitional cell carcinoma but not in bilharzial bladder squamous cell carcinoma: alternative pathways of bladder epithelial differentiation and tumor formation. Cancer Res 1998; 58: 1291–1297.
-
(1998)
Cancer Res
, vol.58
, pp. 1291-1297
-
-
Wu, R.L.1
Osman, I.2
Wu, X.R.3
-
26
-
-
76749089153
-
Predictive value of progression-related gene classifier in primary non-muscle invasive bladder cancer
-
Kim WJ, Kim EJ, Kim SK, et al. Predictive value of progression-related gene classifier in primary non-muscle invasive bladder cancer. Mol Cancer 2010; 9: 3.
-
(2010)
Mol Cancer
, vol.9
, pp. 3
-
-
Kim, W.J.1
Kim, E.J.2
Kim, S.K.3
-
27
-
-
20344375744
-
Bladder cancer outcome and subtype classification by gene expression
-
Blaveri E, Simko JP, Korkola JE, et al. Bladder cancer outcome and subtype classification by gene expression. Clin Cancer Res 2005; 11: 4044–4055.
-
(2005)
Clin Cancer Res
, vol.11
, pp. 4044-4055
-
-
Blaveri, E.1
Simko, J.P.2
Korkola, J.E.3
-
28
-
-
84929001104
-
Human genomics. The Genotype-Tissue Expression (GTEx) pilot analysis: multitissue gene regulation in humans
-
GTEx Consortium. Human genomics. The Genotype-Tissue Expression (GTEx) pilot analysis: multitissue gene regulation in humans. Science 2015; 348: 648–660.
-
(2015)
Science
, vol.348
, pp. 648-660
-
-
|