Rational design of high-yield and superior-quality rice

Nature Plants

Volumn 3, Issue , 2017, Pages

  Zeng, Dali ^a   Tian, Zhixi ^b   Rao, Yuchun ^a   Dong, Guojun ^a   Yang, Yaolong ^a   Huang, Lichao ^a   Leng, Yujia ^a   Xu, Jie ^a   Sun, Chuan ^a   Zhang, Guangheng ^a   Hu, Jiang ^a   Zhu, Li ^a   Gao, Zhenyu ^a   Hu, Xingming ^a   Guo, Longbiao ^a   Xiong, Guosheng ^a   Wang, Yonghong ^b   Li, Jiayang ^b   Qian, Qian ^a  

^a INSTITUTE OF PLANT PROTECTION   (China)

^b INSTITUTE OF GENETICS AND DEVELOPMENTAL BIOLOGY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

FOOD GRAIN; GENETICS; ORYZA; PHYSIOLOGY; PLANT BREEDING; PLANT GENE;

EDIBLE GRAIN; GENES, PLANT; ORYZA; PLANT BREEDING;

EID: 85016061318     PISSN: None     EISSN: 20550278     Source Type: Journal    
DOI: 10.1038/nplants.2017.31     Document Type: Article

References (44)

1. Foley, J. A. et al. Solutions for a cultivated planet. Nature 478, 337-342 (2011).
2. Cheng, S. H. et al. Super hybrid rice breeding in China: achievements and prospects. J. Integ. Plant Biol. 49, 805-810 (2007).
3. Tilman, D., Balzer, C., Hill, J. & Befort, B. L. Global food demand and the sustainable intensification of agriculture. Proc. Natl Acad. Sci. USA 108, 20260-20264 (2011).
4. Xie, H. A. in Rice Genetics, Breeding, and Varieties Genealogy in China Vol. 1 (ed. Wan, J. M.) Ch. 742, 85 (China Agricultural Press, 2010).
5. Suwannaporn, P. & Linnemann, A. Rice-eating quality among consumers in different rice grain preference countries. J. Sens. Stud. 23, 1-13 (2008).
6. Liao, F. M., Zhou, K. L., Yang, H. H. & Xu, Q. S. Comparison of grain quality between F1 hybrids and their parents in indica hybrid rice. Chinese J. Rice Sci. 17, 134-140 (2003).
7. Liu, Q. et al. Stable inheritance of the antisense waxy gene in transgenic rice with reduced amylose level and improved quality. Transgenic Res. 12, 71-82 (2003).
8. Zhang, Q. Strategies for developing Green super rice. Proc. Natl Acad. Sci. USA 104, 16402-16409 (2007).
9. Min, J. et al. Analysis on grain quality of indica hybrid rice combinations bred during recent twenty-five years in China. Chin. J. Rice Sci. 25, 201-205 (2011).
10. Xu, Y. & Crouch, J. H. Marker-assisted selection in plant breeding: from publications to practice. Crop Sci. 48, 391-407 (2008).
11. Septiningsih, E. M. et al. Development of submergence-tolerant rice cultivars: the Sub1 locus and beyond. Ann. Bot. 103, 151-160 (2009).
12. Singh, S. et al. Pyramiding three bacterial blight resistance genes (xa5, xa13 and Xa21) using marker-assisted selection into indica rice cultivar PR106. Theor. Appl. Genet. 102, 1011-1015 (2001).
13. Suh, J. P. et al. Development of resistant gene-pyramided japonica rice for multiple biotic stresses using molecular marker-assisted selection. Plant Breed. 3, 333-345 (2015).
14. Tan, M. K. et al. A SNP marker for the selection of HfrDrd, a Hessian flyresponse gene in wheat. Mol. Breeding. 35, 230 (2015).
15. Li, Z. K. & Zhang, F. Rice breeding in the post-genomics era: from concept to practice. Curr. Opin. Plant Biol. 16, 261-269 (2013).
16. Peleman, J. D. & van der Voort, J. R. Breeding by design. Trends Plant Sci. 8, 330-334 (2003).
17. Wang, Y., Xue, Y. & Li, J. Towards molecular breeding and improvement of rice in China. Trends Plant Sci. 10, 610-614 (2005).
18. Jiang, Y. et al. Rice functional genomics research: progress and implications for crop genetic improvement. Biotechnol. Adv. 30, 1059-1070 (2012).
19. Ikeda, M., Miura, K., Aya, K., Kitano, H. & Matsuoka, M. Genes offering the potential for designing yield-related traits in rice. Curr. Opin. Plant Biol. 16, 213-220 (2013).
20. Qian, Q. et al. Breeding high-yield superior-quality hybrid super-rice by rational design. Natl Sci. Rev. 3 (2016).
21. Xing, Y. & Zhang, Q. Genetic and molecular bases of rice yield. Annu. Rev. Plant Biol. 61, 421-442 (2010).
22. Tian, Z. et al. Allelic diversities in rice starch biosynthesis lead to a diverse array of rice eating and cooking qualities. Proc. Natl Acad. Sci. USA 106, 21760-21765 (2009).
23. Wu, M. L. & Xiong, Z. M. in Rice Varieties and their Genealogy in China (eds Lin, S. C. & Min, S. K.) 33 (Shanghai Science and Technology Press, 1991).
24. Liao, F. Peiliangyou Teqing, a new high-yielding, two-line hybrid rice. Int. Rice Res. News 19, 13-14 (1994).
25. Liu, Q., Cai, X. & Li, Q. Molecular marker-assisted selection for improving cooking and eating quality in Teqing and its hybrid rice. Acta Agronom. Sin. 32, 64-69 (2006).
26. Yang, P. et al. Proteomic analysis of the response of Liangyoupeijiu (super highyield hybrid rice) seedlings to cold stress. J. Integ. Plant Biol. 48, 945-951 (2006).
27. Ohdan, T. et al. Expression profiling of genes involved in starch synthesis in sink and source organs of rice. J. Exp. Bot. 56, 3229-3244 (2005).
28. Fan, C. et al. GS3, a major QTL for grain length and weight and minor QTL for grain width and thickness in rice, encodes a putative transmembrane protein. Theor. Appl. Genet. 112, 1164-1171 (2006).
29. Shomura, A. et al. Deletion in a gene associated with grain size increased yields during rice domestication. Nat. Genet. 40, 1023-1028 (2008).
30. Ashikari, M. et al. Cytokinin oxidase regulates rice grain production. Science 309, 741-745 (2005).
31. Ookawa, T. et al. New approach for rice improvement using a pleiotropic QTL gene for lodging resistance and yield. Nat. Commun. 1, 132 (2010).
32. Spielmeyer, W., Ellis, M. H. & Chandler, P. M. Semidwarf (sd-1), "Green revolution" rice, contains a defective gibberellin 20-oxidase gene. Proc. Natl Acad. Sci. USA 99, 9043-9048 (2002).
33. Yu, B. et al. Tac1, a major quantitative trait locus controlling tiller angle in rice. Plant J. 52, 891-898 (2007).
34. Yano, M. et al. Hd1, a major photoperiod sensitivity quantitative trait locus in rice, is closely related to the Arabidopsis flowering time gene CONSTANS. Plant Cell 12, 2473-2484 (2000).
35. Endo-Higashi, N. & Izawa, T. Flowering time genes Heading Date 1 and Early Heading Date 1 together control panicle development in rice. Plant Cell Physiol. 52, 1083-1094 (2011).
36. Xue, W. et al. Natural variation in Ghd7 is an important regulator of heading date and yield potential in rice. Nat. Genet. 40, 761-767 (2008).
37. Yan, W. H. et al. A major QTL, Ghd8, plays pleiotropic roles in regulating grain productivity, plant height, and heading date in rice. Mol. Plant 4, 319-330 (2011).
38. Wan, X. et al. QTL detection for eating quality of cooked rice in a population of chromosome segment substitution lines. Theor. Appl. Genet. 110, 71-79 (2004).
39. Lestari, P. et al. PCR marker-based evaluation of the eating quality of Japonica rice (Oryza sativa L.). J. Agric. Food Chem. 57, 2754-2762 (2009).
40. Gao, Z. Y. et al. Dissecting yield-associated loci in super hybrid rice by resequencing recombinant inbred lines and improving parental genome sequences. Proc. Natl Acad. Sci USA 110, 14492-14497 (2013).
41. Si, H. M. et al. Current situation and suggestions for development of two-line hybrid rice in China. Chin. J. Rice Sci. 25, 544-552 (2011).
42. Wang, D. et al. Optimizing hill seeding density for high-yielding hybrid rice in a single rice cropping system in South China. PLoS ONE 9, e109417 (2014).
43. Tang, R. et al. GB/T17891-1999 in National Standard of People's Republic of China (Standards Press of China, 1999).
44. Lai, S. et al. Cooking and eating quality of indica rice varieties from South China by using rice taste analyzer. Chin. J. Rice Sci. 25, 435-438 (2011).