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Volumn 44, Issue W1, 2016, Pages W105-W109

PathwAX: a web server for network crosstalk based pathway annotation

Author keywords

[No Author keywords available]

Indexed keywords

ACCURACY; ACOT7 GENE; ARTICLE; BINOX ALGORITHM; C20ORF20 GENE; CCND1 GENE; CDC25C GENE; CDC42EP3 GENE; CONTROLLED STUDY; DATA BASE; DDAH1 GENE; DLGAP4 GENE; FLJ20674 GENE; FLNB GENE; GENE; GENE EXPRESSION; GENE ONTOLOGY; GENE SET ANALYSIS; GENE SET ENRICHMENT ANALYSIS; GENOME-WIDE ASSOCIATION STUDY; HN1 GENE; HUMAN; KEGG; LOX GENE; MONTE CARLO METHOD; MOUSE; NETWORK CROSSTALK; NONHUMAN; PLXNA3 GENE; PSRC1 GENE; RAT; STATISTICAL SIGNIFICANCE; TGFB1I1 GENE; ALGORITHM; ANIMAL; ARABIDOPSIS; CIONA INTESTINALIS; COMPUTER INTERFACE; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENE REGULATORY NETWORK; GENETICS; INTERNET; METABOLISM; SACCHAROMYCES CEREVISIAE;

EID: 85016008675     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkw356     Document Type: Article
Times cited : (31)

References (18)
  • 3
    • 84946735654 scopus 로고    scopus 로고
    • Gene Ontology Consortium: going forward
    • Gene Ontology Consortium. (2015) Gene Ontology Consortium: going forward. Nucleic Acids Res., 43, D1049–D1056.
    • (2015) Nucleic Acids Res , vol.43 , pp. D1049-D1056
  • 4
    • 84861123691 scopus 로고    scopus 로고
    • Ten years of pathway analysis: current approaches and outstanding challenges
    • Khatri,P., Sirota,M. and Butte,A.J. (2012) Ten years of pathway analysis: current approaches and outstanding challenges. PLoS Comput. Biol., 8, e1002375.
    • (2012) PLoS Comput. Biol , vol.8 , pp. e1002375
    • Khatri, P.1    Sirota, M.2    Butte, A.J.3
  • 5
    • 77957889565 scopus 로고    scopus 로고
    • Heading down the wrong pathway: on the influence of correlation within gene sets
    • Gatti,D.M., Barry,W.T., Nobel,A.B., Rusyn,I. and Wright,F.A. (2010) Heading down the wrong pathway: on the influence of correlation within gene sets. BMC Genomics, 11, 574.
    • (2010) BMC Genomics , vol.11 , pp. 574
    • Gatti, D.M.1    Barry, W.T.2    Nobel, A.B.3    Rusyn, I.4    Wright, F.A.5
  • 9
    • 84872806763 scopus 로고    scopus 로고
    • Statistical assessment of crosstalk enrichment between gene groups in biological networks
    • McCormack,T., Frings,O., Alexeyenko,A. and Sonnhammer,E.L.L. (2013) Statistical assessment of crosstalk enrichment between gene groups in biological networks. PLoS One, 8, e54945.
    • (2013) PLoS One , vol.8 , pp. e54945
    • McCormack, T.1    Frings, O.2    Alexeyenko, A.3    Sonnhammer, E.L.L.4
  • 11
    • 84891781481 scopus 로고    scopus 로고
    • FunCoup 3.0: database of genome-wide functional coupling networks
    • Schmitt,T., Ogris,C. and Sonnhammer,E.L.L. (2014) FunCoup 3.0: database of genome-wide functional coupling networks. Nucleic Acids Res., 42, D380–D388.
    • (2014) Nucleic Acids Res , vol.42 , pp. D380-D388
    • Schmitt, T.1    Ogris, C.2    Sonnhammer, E.L.L.3
  • 13
    • 33645515866 scopus 로고    scopus 로고
    • Global gene expression profiling of pleural mesotheliomas: overexpression of aurora kinases and P16/CDKN2A deletion as prognostic factors and critical evaluation of microarray-based prognostic prediction
    • López-Ríos,F., Chuai,S., Flores,R., Shimizu,S., Ohno,T., Wakahara,K., Illei,P.B., Hussain,S., Krug,L., Zakowski,M.F. et al. (2006) Global gene expression profiling of pleural mesotheliomas: overexpression of aurora kinases and P16/CDKN2A deletion as prognostic factors and critical evaluation of microarray-based prognostic prediction. Cancer Res., 66, 2970–2979.
    • (2006) Cancer Res , vol.66 , pp. 2970-2979
    • López-Ríos, F.1    Chuai, S.2    Flores, R.3    Shimizu, S.4    Ohno, T.5    Wakahara, K.6    Illei, P.B.7    Hussain, S.8    Krug, L.9    Zakowski, M.F.10
  • 15
    • 61449172037 scopus 로고    scopus 로고
    • Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
    • Huang,D.W., Sherman,B.T. and Lempicki,R.A. (2008) Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat. Protoc., 4, 44–57.
    • (2008) Nat. Protoc , vol.4 , pp. 44-57
    • Huang, D.W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 16
    • 79955398591 scopus 로고    scopus 로고
    • Otto Warburg’s contributions to current concepts of cancer metabolism
    • Koppenol,W.H., Bounds,P.L. and Dang,C.V. (2011) Otto Warburg’s contributions to current concepts of cancer metabolism. Nat. Rev. Cancer, 11, 325–337.
    • (2011) Nat. Rev. Cancer , vol.11 , pp. 325-337
    • Koppenol, W.H.1    Bounds, P.L.2    Dang, C.V.3
  • 17
    • 84954121945 scopus 로고    scopus 로고
    • LEGO: a novel method for gene set over-representation analysis by incorporating network-based gene weights
    • Dong,X., Xinran,D., Yun,H., Xiao,W. and Weidong,T. (2016) LEGO: a novel method for gene set over-representation analysis by incorporating network-based gene weights. Sci. Rep., 6, 18871.
    • (2016) Sci. Rep , vol.6 , pp. 18871
    • Dong, X.1    Xinran, D.2    Yun, H.3    Xiao, W.4    Weidong, T.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.