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Volumn 8, Issue 1, 2017, Pages

A mobile element in mutS drives hypermutation in a marine vibrio

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BACTERIAL GENE; BACTERIAL GENOME; BETAPROTEOBACTERIA; CONTROLLED STUDY; EVOLUTION; EXCISION REPAIR; FRAMESHIFT MUTATION; GAMMAPROTEOBACTERIA; GENE DELETION; GENE PRODUCT; GENE SEQUENCE; HYPERMUTATION; MUTATION; MUTATION RATE; MUTS GENE; NONHUMAN; PHENOTYPE; PROMOTER REGION; RNA TRANSLATION; TRANSLATION START SEQUENCE; VIBRIO; VIBRIO SPLENDIDUS 12B01; WHOLE GENOME SEQUENCING; AQUATIC SPECIES; GENE EXPRESSION REGULATION; GENETIC RECOMBINATION; GENETICS; INTERSPERSED REPEAT;

EID: 85014794698     PISSN: 21612129     EISSN: 21507511     Source Type: Journal    
DOI: 10.1128/mBio.02045-16     Document Type: Article
Times cited : (17)

References (54)
  • 1
    • 0034049514 scopus 로고    scopus 로고
    • The consequences of growth of a mutator strain of Escherichia colias measured by loss of function among multiple gene targets and loss of fitness
    • Funchain P, Yeung A, Stewart JL, Lin R, Slupska MM, Miller JH. 2000. The consequences of growth of a mutator strain of Escherichia coli as measured by loss of function among multiple gene targets and loss of fitness. Genetics 154:959-970.
    • (2000) Genetics , vol.154 , pp. 959-970
    • Funchain, P.1    Yeung, A.2    Stewart, J.L.3    Lin, R.4    Slupska, M.M.5    Miller, J.H.6
  • 3
    • 57349088170 scopus 로고    scopus 로고
    • Genetic adaptation of Pseudomonas aeruginosa to the airways of cystic fibrosis patients is catalyzed by hypermutation
    • Mena A, Smith EE, Burns JL, Speert DP, Moskowitz SM, Perez JL, Oliver A. 2008. Genetic adaptation of Pseudomonas aeruginosa to the airways of cystic fibrosis patients is catalyzed by hypermutation. J Bacteriol 190: 7910-7917. https://doi.org/10.1128/JB.01147-08.
    • (2008) J Bacteriol , vol.190 , pp. 7910-7917
    • Mena, A.1    Smith, E.E.2    Burns, J.L.3    Speert, D.P.4    Moskowitz, S.M.5    Perez, J.L.6    Oliver, A.7
  • 4
    • 0034685940 scopus 로고    scopus 로고
    • High frequency of hypermutable Pseudomonas aeruginosa in cystic fibrosis lung infection
    • Oliver A, Canton R, Campo P, Baquero F, Blazquez J. 2000. High frequency of hypermutable Pseudomonas aeruginosa in cystic fibrosis lung infection. Science 288:1251-1254. https://doi.org/10.1126/science.288.5469.1251.
    • (2000) Science , vol.288 , pp. 1251-1254
    • Oliver, A.1    Canton, R.2    Campo, P.3    Baquero, F.4    Blazquez, J.5
  • 5
    • 0035970874 scopus 로고    scopus 로고
    • Costs and benefits of high mutation rates: Adaptive evolution ofbacteria in the mouse gut
    • Giraud A, Matic I, Tenaillon O, Clara A, Radman M, Fons M, Taddei F. 2001. Costs and benefits of high mutation rates: adaptive evolution ofbacteria in the mouse gut. Science 291:2606-2608. https://doi.org/10.1126/science.1056421.
    • (2001) Science , vol.291 , pp. 2606-2608
    • Giraud, A.1    Matic, I.2    Tenaillon, O.3    Clara, A.4    Radman, M.5    Fons, M.6    Taddei, F.7
  • 6
    • 0035807822 scopus 로고    scopus 로고
    • Mutation frequency and biological cost of antibiotic resistance in Helicobacter pylori
    • Bjorkholm B, Sjolund M, Falk PG, Berg OG, Engstrand L, Andersson DI. 2001. Mutation frequency and biological cost of antibiotic resistance in Helicobacter pylori. Proc Natl Acad Sci U S A 98:14607-14612. https://doi.org/10.1073/pnas.241517298.
    • (2001) Proc Natl Acad Sci U S A , vol.98 , pp. 14607-14612
    • Bjorkholm, B.1    Sjolund, M.2    Falk, P.G.3    Berg, O.G.4    Engstrand, L.5    Ersson, D.I.6
  • 7
    • 0029860724 scopus 로고    scopus 로고
    • High mutation frequencies among Escherichia coli and Salmonella pathogens
    • LeClerc JE, Li B, Payne WL, Cebula TA. 1996. High mutation frequencies among Escherichia coli and Salmonella pathogens. Science 274: 1208-1211. https://doi.org/10.1126/science.274.5290.1208.
    • (1996) Science , vol.274 , pp. 1208-1211
    • Leclerc, J.E.1    Li, B.2    Payne, W.L.3    Cebula, T.A.4
  • 8
    • 0030777211 scopus 로고    scopus 로고
    • Highly variable mutation rates in commensal and pathogenic Escherichia coli
    • Matic I, Radman M, Taddei F, Picard B, Doit C, Bingen E, Denamur E, Elion J. 1997. Highly variable mutation rates in commensal and pathogenic Escherichia coli. Science 277:1833-1834. https://doi.org/10.1126/science.277.5333.1833.
    • (1997) Science , vol.277 , pp. 1833-1834
    • Matic, I.1    Radman, M.2    Taddei, F.3    Picard, B.4    Doit, C.5    Bingen, E.6    Denamur, E.7    Elion, J.8
  • 10
    • 33845321413 scopus 로고    scopus 로고
    • The emergence of antibiotic resistanceby mutation
    • Woodford N, Ellington MJ. 2007. The emergence of antibiotic resistanceby mutation. Clin Microbiol Infect 13:5-18. https://doi.org/10.1111/j.1469-0691.2006.01492.x.
    • (2007) Clin Microbiol Infect , vol.13 , pp. 5-18
    • Woodford, N.1    Ellington, M.J.2
  • 12
    • 0042242609 scopus 로고    scopus 로고
    • The evolution of mutator genes in bacterial populations: The roles of environmental change and timing
    • Tanaka MM, Bergstrom CT, Levin BR. 2003. The evolution of mutator genes in bacterial populations: the roles of environmental change and timing. Genetics 164:843-854.
    • (2003) Genetics , vol.164 , pp. 843-854
    • Tanaka, M.M.1    Bergstrom, C.T.2    Levin, B.R.3
  • 13
    • 0032979190 scopus 로고    scopus 로고
    • Mutators, population size, adaptive landscape and the adaptation of asexual populations of bacteria
    • Tenaillon O, Toupance B, Le Nagard HL, Taddei F, Godelle B. 1999. Mutators, population size, adaptive landscape and the adaptation of asexual populations of bacteria. Genetics 152:485-493.
    • (1999) Genetics , vol.152 , pp. 485-493
    • Tenaillon, O.1    Toupance, B.2    Le Nagard, H.L.3    Taddei, F.4    Godelle, B.5
  • 15
    • 0001224667 scopus 로고
    • Some genetic aspects of sex
    • Muller HJ. 1932. Some genetic aspects of sex. Am Nat 66:118-138. https://doi.org/10.1086/280418.
    • (1932) Am Nat , vol.66 , pp. 118-138
    • Muller, H.J.1
  • 16
    • 0029038378 scopus 로고
    • Adaptive mutation: Who’s really in the garden?
    • Shapiro JA. 1995. Adaptive mutation: who’s really in the garden? Science 268:373-374. https://doi.org/10.1126/science.7716540.
    • (1995) Science , vol.268 , pp. 373-374
    • Shapiro, J.A.1
  • 17
    • 84874193830 scopus 로고    scopus 로고
    • Evaluating evolutionary models of stress-induced mutagenesis in bacteria
    • MacLean RC, Torres-Barcelo C, Moxon R. 2013. Evaluating evolutionary models of stress-induced mutagenesis in bacteria. Nat Rev Genet 14: 221-227. https://doi.org/10.1038/nrg3415.
    • (2013) Nat Rev Genet , vol.14 , pp. 221-227
    • Maclean, R.C.1    Torres-Barcelo, C.2    Moxon, R.3
  • 19
    • 67849086820 scopus 로고    scopus 로고
    • DinB upregulation is the sole role of the SOS response in stress-induced mutagenesis in Escherichia coli
    • Galhardo RS, Do R, Yamada M, Friedberg EC, Hastings PJ, Nohmi T, Rosenberg SM. 2009. DinB upregulation is the sole role of the SOS response in stress-induced mutagenesis in Escherichia coli. Genetics 182:55-68. https://doi.org/10.1534/genetics.109.100735.
    • (2009) Genetics , vol.182 , pp. 55-68
    • Galhardo, R.S.1    Do, R.2    Yamada, M.3    Friedberg, E.C.4    Hastings, P.J.5    Nohmi, T.6    Rosenberg, S.M.7
  • 20
    • 0029843192 scopus 로고    scopus 로고
    • Spontaneous mutators in bacteria: Insights into pathways of mutagenesis and repair
    • Miller JH. 1996. Spontaneous mutators in bacteria: insights into pathways of mutagenesis and repair. Annu Rev Microbiol 50:625-643. https://doi.org/10.1146/annurev.micro.50.1.625.
    • (1996) Annu Rev Microbiol , vol.50 , pp. 625-643
    • Miller, J.H.1
  • 21
    • 0032565566 scopus 로고    scopus 로고
    • Detection of mutator subpopulations in Salmonella typhimurium LT2 by reversion of his alleles
    • LeClerc JE, Payne WL, Kupchella E, Cebula TA. 1998. Detection of mutator subpopulations in Salmonella typhimurium LT2 by reversion of his alleles. Mutat Res 400:89-97.
    • (1998) Mutat Res , vol.400 , pp. 89-97
    • Leclerc, J.E.1    Payne, W.L.2    Kupchella, E.3    Cebula, T.A.4
  • 22
    • 0037515830 scopus 로고    scopus 로고
    • Molecular analysis of mutS expression and mutation in natural isolates of pathogenic Escherichia coli
    • Li B, Tsui HC, LeClerc JE, Dey M, Winkler ME, Cebula TA. 2003. Molecular analysis of mutS expression and mutation in natural isolates of pathogenic Escherichia coli. Microbiology 149:1323-1331.
    • (2003) Microbiology , vol.149 , pp. 1323-1331
    • Li, B.1    Tsui, H.C.2    Leclerc, J.E.3    Dey, M.4    Winkler, M.E.5    Cebula, T.A.6
  • 23
    • 0036274037 scopus 로고    scopus 로고
    • The mismatch repair system (MutS, mutL and uvrD genes) in Pseudomonas aeruginosa: Molecular characterization of naturally occurring mutants
    • Oliver A, Baquero F, Blazquez J. 2002. The mismatch repair system (mutS, mutL and uvrD genes) in Pseudomonas aeruginosa: molecular characterization of naturally occurring mutants. Mol Microbiol 43:1641-1650. https://doi.org/10.1046/j.1365-2958.2002.02855.x.
    • (2002) Mol Microbiol , vol.43 , pp. 1641-1650
    • Oliver, A.1    Baquero, F.2    Blazquez, J.3
  • 24
    • 0037197858 scopus 로고    scopus 로고
    • Mutator clones of Neisseria meningitidis in epidemic serogroup A disease
    • Richardson AR, Yu Z, Popovic T, Stojiljkovic I. 2002. Mutator clones of Neisseria meningitidis in epidemic serogroup A disease. Proc Natl Acad Sci USA 99:6103-6107. https://doi.org/10.1073/pnas.092568699.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 6103-6107
    • Richardson, A.R.1    Yu, Z.2    Popovic, T.3    Stojiljkovic, I.4
  • 25
    • 0141817853 scopus 로고    scopus 로고
    • What is driving the acquisition of mutS and rpoS polymorphisms in Escherichia coli?
    • Ferenci T. 2003. What is driving the acquisition of mutS and rpoS polymorphisms in Escherichia coli? Trends Microbiol 11:457-461. https://doi.org/10.1016/j.tim.2003.08.003.
    • (2003) Trends Microbiol , vol.11 , pp. 457-461
    • Ferenci, T.1
  • 26
    • 0037235274 scopus 로고    scopus 로고
    • Genomic variability among enteric pathogens: The case of the mutS-rpoS intergenic region
    • Kotewicz ML, Brown EW, Eugene LeClerc J, Cebula TA. 2003. Genomic variability among enteric pathogens: the case of the mutS-rpoS intergenic region. Trends Microbiol 11:2-6. https://doi.org/10.1016/S0966-842X(02)00005-7.
    • (2003) Trends Microbiol , vol.11 , pp. 2-6
    • Kotewicz, M.L.1    Brown, E.W.2    Eugene Leclerc, J.3    Cebula, T.A.4
  • 27
    • 0028065674 scopus 로고
    • Adaptive evolution of highly mutable loci in pathogenic bacteria
    • Moxon ER, Rainey PB, Nowak MA, Lenski RE. 1994. Adaptive evolution of highly mutable loci in pathogenic bacteria. Curr Biol 4:24-33. https://doi.org/10.1016/S0960-9822(00)00005-1.
    • (1994) Curr Biol , vol.4 , pp. 24-33
    • Moxon, E.R.1    Rainey, P.B.2    Nowak, M.A.3    Lenski, R.E.4
  • 28
    • 34547770887 scopus 로고    scopus 로고
    • Causes and consequences of DNA repair activity modulation during stationary phase in Escherichia coli
    • Saint-Ruf C, Pesut J, Sopta M, Matic I. 2007. Causes and consequences of DNA repair activity modulation during stationary phase in Escherichia coli. Crit Rev Biochem Mol Biol 42:259-270. https://doi.org/10.1080/10409230701495599.
    • (2007) Crit Rev Biochem Mol Biol , vol.42 , pp. 259-270
    • Saint-Ruf, C.1    Pesut, J.2    Sopta, M.3    Matic, I.4
  • 30
    • 52649114804 scopus 로고    scopus 로고
    • Phage-associated mutator phenotype in group A Streptococcus
    • Scott J, Thompson-Mayberry P, Lahmamsi S, King CJ, McShan WM. 2008. Phage-associated mutator phenotype in group A Streptococcus. J Bacteriol 190:6290-6301. https://doi.org/10.1128/JB.01569-07.
    • (2008) J Bacteriol , vol.190 , pp. 6290-6301
    • Scott, J.1    Thompson-Mayberry, P.2    Lahmamsi, S.3    King, C.J.4    McShan, W.M.5
  • 31
    • 0001641514 scopus 로고
    • Mutations of bacteria from virus sensitivity to virus resistance
    • Luria SE, Delbruck M. 1943. Mutations of bacteria from virus sensitivity to virus resistance. Genetics 28:491-511.
    • (1943) Genetics , vol.28 , pp. 491-511
    • Luria, S.E.1    Delbruck, M.2
  • 32
    • 0023778011 scopus 로고
    • The origin of mutants
    • Cairns J, Overbaugh J, Miller S. 1988. The origin of mutants. Nature 335:142-145. https://doi.org/10.1038/335142a0.
    • (1988) Nature , vol.335 , pp. 142-145
    • Cairns, J.1    Overbaugh, J.2    Miller, S.3
  • 33
    • 0001313535 scopus 로고
    • The distribution of the numbers of mutants inbacterial populations
    • Lea DE, Coulson CA. 1949. The distribution of the numbers of mutants inbacterial populations. J Genet 49:264-285. https://doi.org/10.1007/BF02986080.
    • (1949) J Genet , vol.49 , pp. 264-285
    • Lea, D.E.1    Coulson, C.A.2
  • 34
    • 84867339877 scopus 로고    scopus 로고
    • Rate and molecular spectrum of spontaneous mutations in the bacterium Escherichia coli as determined by whole-genome sequencing
    • Lee H, Popodi E, Tang H, Foster PL. 2012. Rate and molecular spectrum of spontaneous mutations in the bacterium Escherichia coli as determined by whole-genome sequencing. Proc Natl Acad Sci U S A 109: E2774-E2783. https://doi.org/10.1073/pnas.1210309109.
    • (2012) Proc Natl Acad Sci U S A , vol.109 , pp. E2774-E2783
    • Lee, H.1    Popodi, E.2    Tang, H.3    Foster, P.L.4
  • 36
    • 0022520188 scopus 로고
    • Analysis of spontaneous base substitutions generated in mismatch-repair-deficient strains of Escherichia coli
    • Leong PM, Hsia HC, Miller JH. 1986. Analysis of spontaneous base substitutions generated in mismatch-repair-deficient strains of Escherichia coli. J Bacteriol 168:412-416. https://doi.org/10.1128/jb.168.1.412-416.1986.
    • (1986) J Bacteriol , vol.168 , pp. 412-416
    • Leong, P.M.1    Hsia, H.C.2    Miller, J.H.3
  • 37
    • 0023410420 scopus 로고
    • Spectra of spontaneous mutations in Escherichia coli strains defective in mismatch correction: The nature of in vivo DNA replication errors
    • Schaaper RM, Dunn RL. 1987. Spectra of spontaneous mutations in Escherichia coli strains defective in mismatch correction: the nature of in vivo DNA replication errors. Proc Natl Acad Sci U S A 84:6220-6224. https://doi.org/10.1073/pnas.84.17.6220.
    • (1987) Proc Natl Acad Sci U S A , vol.84 , pp. 6220-6224
    • Schaaper, R.M.1    Dunn, R.L.2
  • 38
    • 0034641947 scopus 로고    scopus 로고
    • The crystal structure of DNA mismatch repair protein MutS binding to a G T mismatch
    • Lamers MH, Perrakis A, Enzlin JH, Winterwerp HHK, de Wind N, Sixma TK. 2000. The crystal structure of DNA mismatch repair protein MutS binding to a G T mismatch. Nature 407:711-717. https://doi.org/10.1038/35037523.
    • (2000) Nature , vol.407 , pp. 711-717
    • Lamers, M.H.1    Perrakis, A.2    Enzlin, J.H.3    Winterwerp, H.4    De Wind, N.5    Sixma, T.K.6
  • 39
    • 84942035103 scopus 로고    scopus 로고
    • A new perspective on lysogeny: Prophages as active regulatory switches of bacteria
    • Feiner R, Argov T, Rabinovich L, Sigal N, Borovok I, Herskovits AA. 2015. A new perspective on lysogeny: prophages as active regulatory switches of bacteria. Nat Rev Microbiol 13:641-650. https://doi.org/10.1038/nrmicro3527.
    • (2015) Nat Rev Microbiol , vol.13 , pp. 641-650
    • Feiner, R.1    Argov, T.2    Rabinovich, L.3    Sigal, N.4    Borovok, I.5    Herskovits, A.A.6
  • 41
    • 50449084975 scopus 로고    scopus 로고
    • Endogenous oxidative stress produces diversity and adaptability in biofilm communities
    • Boles BR, Singh PK. 2008. Endogenous oxidative stress produces diversity and adaptability in biofilm communities. Proc Natl Acad Sci U S A 105:12503-12508. https://doi.org/10.1073/pnas.0801499105.
    • (2008) Proc Natl Acad Sci U S A , vol.105 , pp. 12503-12508
    • Boles, B.R.1    Singh, P.K.2
  • 43
    • 0032530155 scopus 로고    scopus 로고
    • A phylogenomic study of the MutS family of proteins
    • Eisen JA. 1998. A phylogenomic study of the MutS family of proteins. Nucleic Acids Res 26:4291-4300. https://doi.org/10.1093/nar/26.18.4291.
    • (1998) Nucleic Acids Res , vol.26 , pp. 4291-4300
    • Eisen, J.A.1
  • 47
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
    • Langmead B, Trapnell C, Pop M, Salzberg SL. 2009. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 10:R25. https://doi.org/10.1186/gb-2009-10-3-r25.
    • (2009) Genome Biol , vol.10 , pp. 25
    • Langmead, B.1    Trapnell, C.2    Pop, M.3    Salzberg, S.L.4
  • 48
    • 74349093158 scopus 로고    scopus 로고
    • Autonomous plasmid-like replication of a conjugative transposon
    • Lee CA, Babic A, Grossman AD. 2010. Autonomous plasmid-like replication of a conjugative transposon. Mol Microbiol 75:268-279. https://doi.org/10.1111/j.1365-2958.2009.06985.x.
    • (2010) Mol Microbiol , vol.75 , pp. 268-279
    • Lee, C.A.1    Babic, A.2    Grossman, A.D.3
  • 50
    • 67650757433 scopus 로고    scopus 로고
    • TrimAl: A tool for automated alignment trimming in large-scale phylogenetic analyses
    • Capella-Gutierrez S, Silla-Martinez JM, Gabaldon T. 2009. trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses. Bioinformatics 25:1972-1973. https://doi.org/10.1093/bioinformatics/btp348.
    • (2009) Bioinformatics , vol.25 , pp. 1972-1973
    • Capella-Gutierrez, S.1    Silla-Martinez, J.M.2    Gabaldon, T.3
  • 51
    • 85014768147 scopus 로고    scopus 로고
    • Interactive tree of life (ITOL) v3: An online tool for the display and annotation of phylogenetic and other trees
    • Letunic I, Bork P. 2016. Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees. Nucleic Acids Res 44:W242-W245. https://doi.org/10.1093/nar/gkw290.
    • (2016) Nucleic Acids Res , vol.44 , pp. W242-W245
    • Letunic, I.1    Bork, P.2
  • 54
    • 84899553363 scopus 로고    scopus 로고
    • RAxML version 8: A tool for phylogenetic analysis and post-analysis of large phylogenies
    • Stamatakis A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30:1312-1313. https://doi.org/10.1093/bioinformatics/btu033.
    • (2014) Bioinformatics , vol.30 , pp. 1312-1313
    • Stamatakis, A.1


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