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Volumn 8, Issue FEB, 2017, Pages

Predominance of viable spore-forming piezophilic bacteria in high-pressure enrichment cultures from ~1.5 to 2.4 km-deep coal-bearing sediments below the ocean floor

Author keywords

Coal beds; Deep biosphere; Endospore; High pressure; Marine sediment; Piezophiles

Indexed keywords

RNA 16S;

EID: 85014482712     PISSN: None     EISSN: 1664302X     Source Type: Journal    
DOI: 10.3389/fmicb.2017.00137     Document Type: Article
Times cited : (28)

References (54)
  • 2
    • 0032914127 scopus 로고    scopus 로고
    • Monounsaturated but not polyunsaturated fatty acids are required for growth of the deep-sea bacterium Photobacterium profundum SS9 at high pressure and low temperature
    • Allen, E. E., Facciotti, D., and Bartlett, D. H. (1999). Monounsaturated but not polyunsaturated fatty acids are required for growth of the deep-sea bacterium Photobacterium profundum SS9 at high pressure and low temperature. Appl. Environ. Microbiol. 65, 1710-1720.
    • (1999) Appl. Environ. Microbiol , vol.65 , pp. 1710-1720
    • Allen, E.E.1    Facciotti, D.2    Bartlett, D.H.3
  • 3
    • 84931266837 scopus 로고    scopus 로고
    • Dynamic transition of chemolithotrophic sulfur-oxidizing bacteria in response to amendment with nitrate in deposited marine sediments
    • Aoyagi, T., Kimura, M., Yamada, N., Navarro, R. R., Itoh, H., Ogata, A., et al. (2015). Dynamic transition of chemolithotrophic sulfur-oxidizing bacteria in response to amendment with nitrate in deposited marine sediments. Front. Microbiol. 6:426. doi: 10.3389/fmicb.2015.00426.
    • (2015) Front. Microbiol , vol.6 , pp. 426
    • Aoyagi, T.1    Kimura, M.2    Yamada, N.3    Navarro, R.R.4    Itoh, H.5    Ogata, A.6
  • 4
    • 0030899619 scopus 로고    scopus 로고
    • Desulfovibrio profundus sp. nov., a novel barophilic sulfate-reducing bacterium from deep sediment layers in the Japan Sea
    • Bale, S. J., Goodman, K., Rochelle, P. A., Marchesi, J. R., Fry, J. C., Weightman, A. J., et al. (1997). Desulfovibrio profundus sp. nov., a novel barophilic sulfate-reducing bacterium from deep sediment layers in the Japan Sea. Int. J. Syst. Bacteriol. 47, 515-521. doi: 10.1099/00207713-47-2-515.
    • (1997) Int. J. Syst. Bacteriol , vol.47 , pp. 515-521
    • Bale, S.J.1    Goodman, K.2    Rochelle, P.A.3    Marchesi, J.R.4    Fry, J.C.5    Weightman, A.J.6
  • 5
    • 0028895181 scopus 로고
    • High pressure influences on gene and protein expression
    • Bartlett, D. H., Kato, C., and Horikoshi, K. (1995). High pressure influences on gene and protein expression. Res. Microbiol. 146, 697-706. doi: 10.1016/0923-2508(96)81066-7.
    • (1995) Res. Microbiol , vol.146 , pp. 697-706
    • Bartlett, D.H.1    Kato, C.2    Horikoshi, K.3
  • 6
    • 34547513507 scopus 로고    scopus 로고
    • Phylogenetic and physiological diversity of cultured deep-biosphere bacteria from equatorial Pacific Ocean and Peru margin sediments
    • Batzke, A., Engelen, B., Sass, H., and Cypionka, H. (2007). Phylogenetic and physiological diversity of cultured deep-biosphere bacteria from equatorial Pacific Ocean and Peru margin sediments. Geomicrobiol. J. 24, 261-273. doi: 10.1080/01490450701456453.
    • (2007) Geomicrobiol. J , vol.24 , pp. 261-273
    • Batzke, A.1    Engelen, B.2    Sass, H.3    Cypionka, H.4
  • 8
    • 84863981120 scopus 로고    scopus 로고
    • Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms
    • Caporaso, J. G., Lauber, C. L., Walters, W. A., Berg-Lyons, D., Huntley, J., Fierer, N., et al. (2012). Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms. ISME J. 6, 1621-1624. doi: 10.1038/ismej.2012.8.
    • (2012) ISME J , vol.6 , pp. 1621-1624
    • Caporaso, J.G.1    Lauber, C.L.2    Walters, W.A.3    Berg-Lyons, D.4    Huntley, J.5    Fierer, N.6
  • 9
    • 84903384512 scopus 로고    scopus 로고
    • Microorganisms persist at record depths in the subseafloor of the Canterbury Basin
    • Ciobanu, M.-C., Burgaud, G., Dufresne, A., Breuker, A., Rédou, V., Maamar, S. B., et al. (2014). Microorganisms persist at record depths in the subseafloor of the Canterbury Basin. ISME J. 8, 1370-1380. doi: 10.1038/ismej.2013.250.
    • (2014) ISME J , vol.8 , pp. 1370-1380
    • Ciobanu, M.-C.1    Burgaud, G.2    Dufresne, A.3    Breuker, A.4    Rédou, V.5    Maamar, S.B.6
  • 10
    • 0026755238 scopus 로고
    • Archaea in coastal marine environments
    • DeLong, E. F. (1992). Archaea in coastal marine environments. Proc. Natl. Acad. Sci. U.S.A. 89, 5685-5689. doi: 10.1073/pnas.89.12.5685.
    • (1992) Proc. Natl. Acad. Sci. U.S.A , vol.89 , pp. 5685-5689
    • DeLong, E.F.1
  • 11
    • 0024358339 scopus 로고
    • Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains
    • Ezaki, T., Hashimoto, Y., and Yabuuchi, E. (1989). Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int. J. Syst. Bacteriol. 39, 224-229. doi: 10.1099/00207713-39-3-224.
    • (1989) Int. J. Syst. Bacteriol , vol.39 , pp. 224-229
    • Ezaki, T.1    Hashimoto, Y.2    Yabuuchi, E.3
  • 12
    • 0030250855 scopus 로고    scopus 로고
    • The use of a classic lipid extraction method for simultaneous recovery of organic pollutants and phospholipids
    • Fang, J., and Findlay, R. H. (1996). The use of a classic lipid extraction method for simultaneous recovery of organic pollutants and phospholipids. J. Microbiol. Methods 27, 63-71. doi: 10.1016/0167-7012(96)00929-3.
    • (1996) J. Microbiol. Methods , vol.27 , pp. 63-71
    • Fang, J.1    Findlay, R.H.2
  • 13
    • 34447564121 scopus 로고    scopus 로고
    • Microbial community structure of a stromatolite from an acid mine drainage system, implications for the role of microeukaryotes in the formation of ancient Fe-rich stromatolites
    • Fang, J., Gupta, S. D., Hasiotis, S. T., Brake, S. S., and Bazylinski, D. A. (2007). Microbial community structure of a stromatolite from an acid mine drainage system, implications for the role of microeukaryotes in the formation of ancient Fe-rich stromatolites. Chem. Geol. 243, 191-204. doi: 10.1016/j.chemgeo.2007.06.001.
    • (2007) Chem. Geol , vol.243 , pp. 191-204
    • Fang, J.1    Gupta, S.D.2    Hasiotis, S.T.3    Brake, S.S.4    Bazylinski, D.A.5
  • 14
    • 1842664387 scopus 로고    scopus 로고
    • Polyunsaturated fatty acids in piezophilic bacteria: biosynthesis or dietary uptake?
    • Fang, J., Kato, C., Sato, T., Chan, O., Agarkar, N., and McKay, D. S. (2004). Polyunsaturated fatty acids in piezophilic bacteria: biosynthesis or dietary uptake? Comp. Biochem. Physiol. B 137, 455-461. doi: 10.1016/j.cbpc.2004.01.009.
    • (2004) Comp. Biochem. Physiol. B , vol.137 , pp. 455-461
    • Fang, J.1    Kato, C.2    Sato, T.3    Chan, O.4    Agarkar, N.5    McKay, D.S.6
  • 15
    • 77956187864 scopus 로고    scopus 로고
    • The deep-sea piezosphere and piezophiles: geomicrobiology and biogeochemistry
    • Fang, J., Zhang, L., and Bazylinski, D. A. (2010). The deep-sea piezosphere and piezophiles: geomicrobiology and biogeochemistry. Trends Microbiol. 18, 413-422. doi: 10.1016/j.tim.2010.06.006.
    • (2010) Trends Microbiol , vol.18 , pp. 413-422
    • Fang, J.1    Zhang, L.2    Bazylinski, D.A.3
  • 16
    • 54049126122 scopus 로고    scopus 로고
    • High variations in endospore numbers within tidal flat sediments revealed by quantification of dipicolinic acid
    • Fichtel, J., Koster, J., Rullkotter, J., and Sass, H. (2008). High variations in endospore numbers within tidal flat sediments revealed by quantification of dipicolinic acid. Geomicrobiol. J. 25, 371-380. doi: 10.1080/01490450802402877.
    • (2008) Geomicrobiol. J , vol.25 , pp. 371-380
    • Fichtel, J.1    Koster, J.2    Rullkotter, J.3    Sass, H.4
  • 17
    • 84946831990 scopus 로고    scopus 로고
    • Temperature and pressure adaptation of a sulfate reducer from the deep subsurface
    • Fichtel, J., Logemann, J., Fichtel, J., Rullkötter, J., Cypionka, H., and Engelen, B. (2015). Temperature and pressure adaptation of a sulfate reducer from the deep subsurface. Front. Microbiol. 6:1078. doi: 10.3389/fmicb.2015.01078.
    • (2015) Front. Microbiol , vol.6 , pp. 1078
    • Fichtel, J.1    Logemann, J.2    Fichtel, J.3    Rullkötter, J.4    Cypionka, H.5    Engelen, B.6
  • 18
    • 85006827364 scopus 로고    scopus 로고
    • A combination of extreme environmental conditions favor the prevalence of endospore-forming firmicutes
    • Filippidou, S., Wunderlin, T., Junier, T., Jeanneret, N., Dorador, C., Molina, V., et al. (2016). A combination of extreme environmental conditions favor the prevalence of endospore-forming firmicutes. Front. Microbiol. 7:1707. doi: 10.3389/fmicb.2016.01707.
    • (2016) Front. Microbiol , vol.7 , pp. 1707
    • Filippidou, S.1    Wunderlin, T.2    Junier, T.3    Jeanneret, N.4    Dorador, C.5    Molina, V.6
  • 19
    • 33746256589 scopus 로고    scopus 로고
    • Bacillus tequilensis s. nov., isolated from a 2000-year-old Mexican shaft-tomb, is closely related to Bacillus subtilis
    • Gatson, J. W., Benz, B. F., Chandrasekaran, C., Satomi, M., Venkateswaran, K., and Hart, M. E. (2006). Bacillus tequilensis sp. nov., isolated from a 2000-year-old Mexican shaft-tomb, is closely related to Bacillus subtilis. Int. J. Syst. Evol. Microbiol. 56, 1475-1484. doi: 10.1099/ijs.0.63946-0.
    • (2006) Int. J. Syst. Evol. Microbiol , vol.56 , pp. 1475-1484
    • Gatson, J.W.1    Benz, B.F.2    Chandrasekaran, C.3    Satomi, M.4    Venkateswaran, K.5    Hart, M.E.6
  • 20
    • 0023124519 scopus 로고
    • Longevity of microorganisms in natural environments
    • Gest, H., and Mandelstam, J. (1987). Longevity of microorganisms in natural environments. Microbiol. Sci. 4, 69-71.
    • (1987) Microbiol. Sci , vol.4 , pp. 69-71
    • Gest, H.1    Mandelstam, J.2
  • 21
    • 84996814604 scopus 로고    scopus 로고
    • Microbial sulfate reduction potential in coal-bearing sediments down to ~2.5 km below the seafloor offShimokita Peninsula, Japan
    • Glombitza, C., Adhikari, R. R., Riedinger, N., Gilhooly, W. P. III, Hinrichs, K.-U., and Inagaki, F. (2016). Microbial sulfate reduction potential in coal-bearing sediments down to ~2.5 km below the seafloor offShimokita Peninsula, Japan. Front. Microbiol. 7:1576. doi: 10.3389/fmicb.2016.05176.
    • (2016) Front. Microbiol , vol.7 , pp. 1576
    • Glombitza, C.1    Adhikari, R.R.2    Riedinger, N.3    Gilhooly, W.P.4    Hinrichs, K.-U.5    Inagaki, F.6
  • 22
    • 34249744449 scopus 로고    scopus 로고
    • Phylogenetic diversity of gram-positive bacteria cultured from marine sediments
    • Gontang, E. A., Fenical, W., and Jensen, P. R. (2007). Phylogenetic diversity of gram-positive bacteria cultured from marine sediments. Appl. Environ. Microbiol. 73, 3272-3282. doi: 10.1128/AEM.02811-06.
    • (2007) Appl. Environ. Microbiol , vol.73 , pp. 3272-3282
    • Gontang, E.A.1    Fenical, W.2    Jensen, P.R.3
  • 23
    • 84947207357 scopus 로고    scopus 로고
    • Variability in coal facies as reflected by organic petrological and geochemical data in Cenozoic coal beds offshore Shimokita (Japan)-IODP Exp
    • Gross, D., Bachtel, A., and Harrington, G. J. (2015). Variability in coal facies as reflected by organic petrological and geochemical data in Cenozoic coal beds offshore Shimokita (Japan)-IODP Exp. 337. Int. J. Coal Geol. 152, 63-79. doi: 10.1016/j.coal.2015.10.007.
    • (2015) 337. Int. J. Coal Geol , vol.152 , pp. 63-79
    • Gross, D.1    Bachtel, A.2    Harrington, G.J.3
  • 24
    • 0031893769 scopus 로고    scopus 로고
    • Virgibacillus: a new genus to accommodate Bacillus pantothenticus (Proom and Knight 1950). Emended description of Virgibacillus pantothenticus
    • Heyndrickx, M., Lebbe, L., Kersters, K., De Vos, P., Forsyth, G., and Logan, N. A. (1998). Virgibacillus: a new genus to accommodate Bacillus pantothenticus (Proom and Knight 1950). Emended description of Virgibacillus pantothenticus. Int. J. Syst. Bacteriol. 48, 99-106. doi: 10.1099/00207713-48-1-99.
    • (1998) Int. J. Syst. Bacteriol , vol.48 , pp. 99-106
    • Heyndrickx, M.1    Lebbe, L.2    Kersters, K.3    De Vos, P.4    Forsyth, G.5    Logan, N.A.6
  • 25
    • 77954627676 scopus 로고    scopus 로고
    • Thermophilic anaerobes in Arctic marine sediments induced to mineralize complex organic matter at high temperature
    • Hubert, C., Arnosti, C., Brüchert, V., Loy, A., Vandieken, V., and Jørgensen, B. B. (2010). Thermophilic anaerobes in Arctic marine sediments induced to mineralize complex organic matter at high temperature. Environ. Microbiol. 12, 1089-1104. doi: 10.1111/j.1462-2920.2010.02161.x.
    • (2010) Environ. Microbiol , vol.12 , pp. 1089-1104
    • Hubert, C.1    Arnosti, C.2    Brüchert, V.3    Loy, A.4    Vandieken, V.5    Jørgensen, B.B.6
  • 26
    • 84938087437 scopus 로고    scopus 로고
    • Exploring deep microbial life in coal-bearing sediment down to ~2.5 km below the ocean floor
    • Inagaki, F., Hinrichs, K.-U., Kubo, Y., Bowles, M. W., Heuer, V. B., Hong, W.-L., et al. (2015). Exploring deep microbial life in coal-bearing sediment down to ~2.5 km below the ocean floor. Science 349, 420-424. doi: 10.1126/science.aaa6882.
    • (2015) Science , vol.349 , pp. 420-424
    • Inagaki, F.1    Hinrichs, K.-U.2    Kubo, Y.3    Bowles, M.W.4    Heuer, V.B.5    Hong, W.-L.6
  • 27
    • 84898751796 scopus 로고    scopus 로고
    • Deep coalbed biosphere offShimokita: microbial processes and hydrocarbon system associated with deeply buried coalbed in the ocean
    • Inagaki, F., Hinrichs, K.-U., Kubo, Y., and the Expedition 337 Scientists. (2012). Deep coalbed biosphere offShimokita: microbial processes and hydrocarbon system associated with deeply buried coalbed in the ocean. IODP Prel. Rept. 337. doi: 10.2204/iodp.pr.337.2012.
    • (2012) IODP Prel. Rept , vol.337
    • Inagaki, F.1    Hinrichs, K.-U.2    Kubo, Y.3
  • 28
    • 18144401354 scopus 로고    scopus 로고
    • Microbial survival: the Paleome: a sedimentary genetic record of past microbial communities
    • Inagaki, F., Okada, H., Tsapin, A. I., and Nealson, K. H. (2005). Microbial survival: the Paleome: a sedimentary genetic record of past microbial communities. Astrobiology 5, 141-153. doi: 10.1089/ast.2005.5.141.
    • (2005) Astrobiology , vol.5 , pp. 141-153
    • Inagaki, F.1    Okada, H.2    Tsapin, A.I.3    Nealson, K.H.4
  • 29
    • 0037978875 scopus 로고    scopus 로고
    • Marinilactibacillus psychrotolerans gen. nov., sp. nov., a halophilic and alkaliphilic marine lactic acid bacterium isolated from marine organisms in temperate and subtropical areas of Japan
    • Ishikawa, M., Nakajima, K., Yanagi, M., Yamamoto, Y., and Yamasato, K. (2003). Marinilactibacillus psychrotolerans gen. nov., sp. nov., a halophilic and alkaliphilic marine lactic acid bacterium isolated from marine organisms in temperate and subtropical areas of Japan. Int. J. Syst. Evol. Microbiol. 53, 711-720. doi: 10.1099/ijs.0.02446-0.
    • (2003) Int. J. Syst. Evol. Microbiol , vol.53 , pp. 711-720
    • Ishikawa, M.1    Nakajima, K.2    Yanagi, M.3    Yamamoto, Y.4    Yamasato, K.5
  • 30
    • 84907027066 scopus 로고    scopus 로고
    • Evidence of environmental and vertical transmission of Burkholderia symbionts in the oriental chinch bug Cavelerius saccharivorus (Heteroptera: Blissidae)
    • Itoh, H., Aita, M., Nagayama, A., Meng, X. Y., Kamagata, Y., Navarro, R., et al. (2014). Evidence of environmental and vertical transmission of Burkholderia symbionts in the oriental chinch bug Cavelerius saccharivorus (Heteroptera: Blissidae). Appl. Environ. Microbiol. 80, 5974-5983. doi: 10.1128/AEM.01087-14.
    • (2014) Appl. Environ. Microbiol , vol.80 , pp. 5974-5983
    • Itoh, H.1    Aita, M.2    Nagayama, A.3    Meng, X.Y.4    Kamagata, Y.5    Navarro, R.6
  • 31
    • 84924701956 scopus 로고    scopus 로고
    • 'Cultivation methods for piezophiles,'
    • eds K. Horikoshi, G. Antranikian, A. Bull, F. Robb, and K. Stetter (Tokyo: Springer-Verlag)
    • Kato, C. (2011). "Cultivation methods for piezophiles," in Extremophiles Handbook, eds K. Horikoshi, G. Antranikian, A. Bull, F. Robb, and K. Stetter (Tokyo: Springer-Verlag), 719-726.
    • (2011) Extremophiles Handbook , pp. 719-726
    • Kato, C.1
  • 32
    • 0035060886 scopus 로고    scopus 로고
    • Correlation between phylogenetic structure and function: examples from deep-sea Shewanella
    • Kato, C., and Nogi, Y. (2001). Correlation between phylogenetic structure and function: examples from deep-sea Shewanella. FEMS Microbiol. Ecol. 35, 223-230. doi: 10.1111/j.1574-6941.2001.tb00807.x.
    • (2001) FEMS Microbiol. Ecol , vol.35 , pp. 223-230
    • Kato, C.1    Nogi, Y.2
  • 33
    • 0028976429 scopus 로고
    • Isolation and properties of barophilic and barotolerant bacteria from deep-sea mud samples
    • Kato, C., Sato, T., and Horikoshi, K. (1995). Isolation and properties of barophilic and barotolerant bacteria from deep-sea mud samples. Biodivers. Conserv. 4, 1-9. doi: 10.1007/BF00115311.
    • (1995) Biodivers. Conserv , vol.4 , pp. 1-9
    • Kato, C.1    Sato, T.2    Horikoshi, K.3
  • 34
    • 84924815366 scopus 로고    scopus 로고
    • Low frequency of endospore-specific genes in subseafloor sedimentary metagenomes
    • Kawai, M., Uchiyama, I., Takami, H., and Inagaki1, F. (2015). Low frequency of endospore-specific genes in subseafloor sedimentary metagenomes. Environ. Microbiol. Rep. 7, 1-10. doi: 10.1111/1758-2229.12254.
    • (2015) Environ. Microbiol. Rep , vol.7 , pp. 1-10
    • Kawai, M.1    Uchiyama, I.2    Takami, H.3    Inagaki, F.4
  • 35
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16, 111-120. doi: 10.1007/BF01731581.
    • (1980) J. Mol. Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 36
    • 84867746594 scopus 로고    scopus 로고
    • Endospore abundance and D: L-amino acid modeling of bacterial turnover in holocene marine sediment (Aarhus Bay)
    • Langerhuus, A. T., Røy, H., Lever, M. A., Morono, Y., Inagaki, F., Jørgensen, B. B., et al. (2012). Endospore abundance and D: L-amino acid modeling of bacterial turnover in holocene marine sediment (Aarhus Bay). Geochim. Cosmochim. Acta 99, 87-99. doi: 10.1016/j.gca.2012.09.023.
    • (2012) Geochim. Cosmochim. Acta , vol.99 , pp. 87-99
    • Langerhuus, A.T.1    Røy, H.2    Lever, M.A.3    Morono, Y.4    Inagaki, F.5    Jørgensen, B.B.6
  • 38
    • 84859468966 scopus 로고    scopus 로고
    • Endospore abundance, microbial growth and necromass turnover in deep sub-seafloor sediment
    • Lomstein, B. A., Langerhuus, A. T., D'Hondt, S., Jørgensen, B. B., and Spivack, A. J. (2012). Endospore abundance, microbial growth and necromass turnover in deep sub-seafloor sediment. Nature 484, 101-104. doi: 10.1038/nature10905.
    • (2012) Nature , vol.484 , pp. 101-104
    • Lomstein, B.A.1    Langerhuus, A.T.2    D'Hondt, S.3    Jørgensen, B.B.4    Spivack, A.J.5
  • 39
    • 84901288372 scopus 로고    scopus 로고
    • Endospores of thermophilic bacteria as tracers of microbial dispersal by ocean currents
    • Müller, A. L., de Rezende, J. R., Hubert, C. R. J., Kjeldsen, K. U., Lagkouvardos, I., Berry, D., et al. (2014). Endospores of thermophilic bacteria as tracers of microbial dispersal by ocean currents. ISME J. 8, 1153-1165. doi: 10.1038/ismej.2013.225.
    • (2014) ISME J , vol.8 , pp. 1153-1165
    • Müller, A.L.1    de Rezende, J.R.2    Hubert, C.R.J.3    Kjeldsen, K.U.4    Lagkouvardos, I.5    Berry, D.6
  • 40
    • 84936970720 scopus 로고    scopus 로고
    • High-resolution dynamics of microbial communities during dissimilatory selenate reduction in Anoxic Soil
    • Navarro, R. R., Aoyagi, T., Kimura, M., Itoh, H., Sato, Y., Kikuchi, Y., et al. (2015). High-resolution dynamics of microbial communities during dissimilatory selenate reduction in Anoxic Soil. Environ. Sci. Technol. 49, 7684-7691. doi: 10.1021/es505210p.
    • (2015) Environ. Sci. Technol , vol.49 , pp. 7684-7691
    • Navarro, R.R.1    Aoyagi, T.2    Kimura, M.3    Itoh, H.4    Sato, Y.5    Kikuchi, Y.6
  • 41
    • 0031670034 scopus 로고    scopus 로고
    • Taxonomic studies of deep-sea barophilic Shewanella strains and description of Shewanella violacea sp. nov
    • Nogi, Y., Kato, C., and Horikoshi, K. (1998). Taxonomic studies of deep-sea barophilic Shewanella strains and description of Shewanella violacea sp. nov. Arch. Microbiol. 170, 331-338. doi: 10.1007/s002030050650.
    • (1998) Arch. Microbiol , vol.170 , pp. 331-338
    • Nogi, Y.1    Kato, C.2    Horikoshi, K.3
  • 43
    • 84973519346 scopus 로고    scopus 로고
    • Deep subsurface life from North Pond: enrichment, isolation, characterization and genomes of heterotrophic bacteria
    • Russell, J. A., León-Zayas, R., Wrighton, K., and Biddle, J. (2016). Deep subsurface life from North Pond: enrichment, isolation, characterization and genomes of heterotrophic bacteria. Front. Microbiol. 7:678. doi: 10.3389/fmicb.2016.00678.
    • (2016) Front. Microbiol , vol.7 , pp. 678
    • Russell, J.A.1    León-Zayas, R.2    Wrighton, K.3    Biddle, J.4
  • 44
    • 50549178319 scopus 로고
    • Preparation of transforming deoxyribonucleic acid by phenol treatment
    • Saito, H., and Miura, K. (1963). Preparation of transforming deoxyribonucleic acid by phenol treatment. Biochim. Biophys. Acta 72, 612-629. doi: 10.1016/0926-6550(63)90386-4.
    • (1963) Biochim. Biophys. Acta , vol.72 , pp. 612-629
    • Saito, H.1    Miura, K.2
  • 45
    • 0023375195 scopus 로고
    • The neighbor-joining method: a new method for reconstructing phylogenetic trees
    • Saitou, N., and Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4, 406-425.
    • (1987) Mol. Biol. Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 46
    • 84903377831 scopus 로고    scopus 로고
    • 'Sub-seafloor sediments: an extreme but globally significant prokaryotic habitat (taxonomy, diversity, ecology),'
    • eds K. Horikoshi, G. Antranikian, A. T. Bull, F. T. Robb, and K. O. Stetter (Tokyo: Springer)
    • Sass, H., and Parkes, R. J. (2011). "Sub-seafloor sediments: an extreme but globally significant prokaryotic habitat (taxonomy, diversity, ecology)," in Extremophiles Handbook, eds K. Horikoshi, G. Antranikian, A. T. Bull, F. T. Robb, and K. O. Stetter (Tokyo: Springer), 1016-1036.
    • (2011) Extremophiles Handbook , pp. 1016-1036
    • Sass, H.1    Parkes, R.J.2
  • 47
    • 33747073504 scopus 로고    scopus 로고
    • Microbial diversity in the deep sea and the underexplored "rare biosphere"
    • Sogin, M. L., Morrison, H. G., Huber, J. A., Welch, D. M., Huse, S. M., Neal, P. R., et al. (2006). Microbial diversity in the deep sea and the underexplored "rare biosphere". Proc. Natl. Acad. Sci. U.S.A. 103, 12115-12120. doi: 10.1002/9781118010549.ch24.
    • (2006) Proc. Natl. Acad. Sci. U.S.A , vol.103 , pp. 12115-12120
    • Sogin, M.L.1    Morrison, H.G.2    Huber, J.A.3    Welch, D.M.4    Huse, S.M.5    Neal, P.R.6
  • 48
    • 0021715576 scopus 로고
    • Determination of DNA base composition by reverse-phase high-performance liquid chromatography
    • Tamaoka, J., and Komagata, K. (1984). Determination of DNA base composition by reverse-phase high-performance liquid chromatography. FEMS Microbiol. Lett. 25, 125-128. doi: 10.1111/j.1574-6968.1984.tb01388.x.
    • (1984) FEMS Microbiol. Lett , vol.25 , pp. 125-128
    • Tamaoka, J.1    Komagata, K.2
  • 49
    • 84961644477 scopus 로고    scopus 로고
    • Thermal properties and thermal structure in the deep-water coalbed basin offthe Shimokita Peninsula, Japan
    • Tanikawa, W., Tadai, O., Morita, S., Lin, W., Yamada, Y., Sanada, Y., et al. (2016). Thermal properties and thermal structure in the deep-water coalbed basin offthe Shimokita Peninsula, Japan. Mar. Petroleum Geol. 73, 445-461. doi: 10.1016/j.marpetgeo.2016.03.006.
    • (2016) Mar. Petroleum Geol , vol.73 , pp. 445-461
    • Tanikawa, W.1    Tadai, O.2    Morita, S.3    Lin, W.4    Yamada, Y.5    Sanada, Y.6
  • 50
    • 13244296957 scopus 로고    scopus 로고
    • Marinilactibacillus piezotolerans sp. nov., a novel marine lactic acid bacterium isolated from deep sub-seafloor sediment of the Nankai Trough
    • Toffin, T., Zink, K., Kato, C., Pignet, P., Bidault, A., Nadège, B., et al. (2005). Marinilactibacillus piezotolerans sp. nov., a novel marine lactic acid bacterium isolated from deep sub-seafloor sediment of the Nankai Trough. Int. J. Syst. Evol. Microbiol. 55, 345-351. doi: 10.1099/ijs.0.63236-0.
    • (2005) Int. J. Syst. Evol. Microbiol , vol.55 , pp. 345-351
    • Toffin, T.1    Zink, K.2    Kato, C.3    Pignet, P.4    Bidault, A.5    Nadège, B.6
  • 52
    • 0034687374 scopus 로고    scopus 로고
    • Isolation of a 250 million year old halotolerant bacterium from a primary salt crystal
    • Vreeland, R. H., Resenzweig, W. D., and Powers, D. W. (2000). Isolation of a 250 million year old halotolerant bacterium from a primary salt crystal. Nature 407, 897-900. doi: 10.1038/35038060.
    • (2000) Nature , vol.407 , pp. 897-900
    • Vreeland, R.H.1    Resenzweig, W.D.2    Powers, D.W.3
  • 53
    • 0000305648 scopus 로고
    • Evolutional and ecological implications of the properties of deep-sea barophilic bacteria
    • Yayanos, A. A. (1986). Evolutional and ecological implications of the properties of deep-sea barophilic bacteria. Proc. Natl. Acad. Sci. U.S.A. 83, 9542-9546. doi: 10.1073/pnas.83.24.9542.
    • (1986) Proc. Natl. Acad. Sci. U.S.A , vol.83 , pp. 9542-9546
    • Yayanos, A.A.1
  • 54
    • 0028829187 scopus 로고
    • Microbiology to 10,500 meters in the deep-sea
    • Yayanos, A. A. (1995). Microbiology to 10,500 meters in the deep-sea. Annu. Rev. Microbiol. 49, 777-805. doi: 10.1146/annurev.micro.49.1.777.
    • (1995) Annu. Rev. Microbiol , vol.49 , pp. 777-805
    • Yayanos, A.A.1


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