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Volumn 99, Issue , 2012, Pages 87-99

Endospore abundance and d: L-amino acid modeling of bacterial turnover in holocene marine sediment (Aarhus Bay)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA (MICROORGANISMS);

EID: 84867746594     PISSN: 00167037     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.gca.2012.09.023     Document Type: Article
Times cited : (62)

References (46)
  • 1
    • 84974989159 scopus 로고
    • Racemization of amino acids in nature
    • Bada J.L. Racemization of amino acids in nature. Interdiscip. Sci. Rev. 1982, 7:30-46.
    • (1982) Interdiscip. Sci. Rev. , vol.7 , pp. 30-46
    • Bada, J.L.1
  • 2
    • 0037252823 scopus 로고    scopus 로고
    • Abundance of amino sugars and peptidoglycan in marine particulate and dissolved organic matter
    • Benner R., Kaiser K. Abundance of amino sugars and peptidoglycan in marine particulate and dissolved organic matter. Limnol. Oceanogr. 2003, 48:118-128.
    • (2003) Limnol. Oceanogr. , vol.48 , pp. 118-128
    • Benner, R.1    Kaiser, K.2
  • 6
    • 0027060363 scopus 로고
    • Sources and reactivities of amino acids in a coastal marine environment
    • Cowie G.L., Hedges J.I. Sources and reactivities of amino acids in a coastal marine environment. Limnol. Oceanogr. 1992, 37:703-724.
    • (1992) Limnol. Oceanogr. , vol.37 , pp. 703-724
    • Cowie, G.L.1    Hedges, J.I.2
  • 7
    • 48749084517 scopus 로고    scopus 로고
    • Seasonal dynamics of the depth and rate of anaerobic oxidation of methane in Aarhus Bay (Denmark) sediments
    • Dale A.W., Aguilera D.R., Regnier P., Fossing H., Knab N.J., Jørgensen B.B. Seasonal dynamics of the depth and rate of anaerobic oxidation of methane in Aarhus Bay (Denmark) sediments. J. Mar. Res. 2008, 66:127-155.
    • (2008) J. Mar. Res. , vol.66 , pp. 127-155
    • Dale, A.W.1    Aguilera, D.R.2    Regnier, P.3    Fossing, H.4    Knab, N.J.5    Jørgensen, B.B.6
  • 8
    • 0031715432 scopus 로고    scopus 로고
    • Amino acids and hexosamines as indicators of organic matter degradation state in North Sea sediments
    • Dauwe B., Middelburg J.J. Amino acids and hexosamines as indicators of organic matter degradation state in North Sea sediments. Limnol. Oceanogr. 1998, 43:782-798.
    • (1998) Limnol. Oceanogr. , vol.43 , pp. 782-798
    • Dauwe, B.1    Middelburg, J.J.2
  • 9
    • 34547840260 scopus 로고    scopus 로고
    • Spore dipicolinic acid contents used for estimating the number of endospores in sediments
    • Fichtel J., Koster J., Rullkotter J., Sass H. Spore dipicolinic acid contents used for estimating the number of endospores in sediments. FEMS Microbiol. Ecol. 2007, 61:522-532.
    • (2007) FEMS Microbiol. Ecol. , vol.61 , pp. 522-532
    • Fichtel, J.1    Koster, J.2    Rullkotter, J.3    Sass, H.4
  • 10
    • 54049126122 scopus 로고    scopus 로고
    • High variations in endospore numbers within tidal flat sediments revealed by quantification of dipicolinic acid
    • Fichtel J., Koster J., Rullkotter J., Sass H. High variations in endospore numbers within tidal flat sediments revealed by quantification of dipicolinic acid. Geomicrobiol. J. 2008, 25:371-380.
    • (2008) Geomicrobiol. J. , vol.25 , pp. 371-380
    • Fichtel, J.1    Koster, J.2    Rullkotter, J.3    Sass, H.4
  • 12
    • 0036866087 scopus 로고    scopus 로고
    • Utilization of marine sedimentary dissolved organic nitrogen by native anaerobic bacteria
    • Guldberg L.B., Finster K., Jørgensen N.O.G., Middelboe M., Lomstein B.Aa. Utilization of marine sedimentary dissolved organic nitrogen by native anaerobic bacteria. Limnol. Oceanogr. 2002, 47:1712-1722.
    • (2002) Limnol. Oceanogr. , vol.47 , pp. 1712-1722
    • Guldberg, L.B.1    Finster, K.2    Jørgensen, N.O.G.3    Middelboe, M.4    Lomstein, B.5
  • 14
    • 0027112229 scopus 로고
    • In search of a thermodynamic description of biomass yields for the chemotrophic growth of microorganisms
    • Heijnen J.J., van Dijken J.P. In search of a thermodynamic description of biomass yields for the chemotrophic growth of microorganisms. Biotechnol. Bioeng. 1992, 39:833-858.
    • (1992) Biotechnol. Bioeng. , vol.39 , pp. 833-858
    • Heijnen, J.J.1    van Dijken, J.P.2
  • 15
    • 0032723232 scopus 로고    scopus 로고
    • Dipicolinic acid (DPA) assay revisited and appraised for spore detection
    • Hindle A.A., Hall E.A.H. Dipicolinic acid (DPA) assay revisited and appraised for spore detection. Analyst 1999, 124:1599-1604.
    • (1999) Analyst , vol.124 , pp. 1599-1604
    • Hindle, A.A.1    Hall, E.A.H.2
  • 16
    • 79955432780 scopus 로고    scopus 로고
    • A cryptic sulfur cycle driven by iron in the methane zone of marine sediment (Aarhus Bay, Denmark)
    • Holmkvist L., Ferdelman T.G., Jørgensen B.B. A cryptic sulfur cycle driven by iron in the methane zone of marine sediment (Aarhus Bay, Denmark). Geochim. Cosmochim. Acta 2011, 75:3581-3599.
    • (2011) Geochim. Cosmochim. Acta , vol.75 , pp. 3581-3599
    • Holmkvist, L.1    Ferdelman, T.G.2    Jørgensen, B.B.3
  • 17
    • 0037229612 scopus 로고    scopus 로고
    • The role of biominerals in the sinking flux and preservation of amino acids in the Southern Ocean along 170 degrees W
    • Ingalls A.E., Lee C., Wakeham S.G., Hedges J.I. The role of biominerals in the sinking flux and preservation of amino acids in the Southern Ocean along 170 degrees W. Deep-Sea Res. Part II 2003, 50:713-738.
    • (2003) Deep-Sea Res. Part II , vol.50 , pp. 713-738
    • Ingalls, A.E.1    Lee, C.2    Wakeham, S.G.3    Hedges, J.I.4
  • 18
    • 0028164086 scopus 로고
    • Thermophilic sulfate-reducing bacteria in cold marine sediment
    • Isaksen M.F., Bak F., Jørgensen B.B. Thermophilic sulfate-reducing bacteria in cold marine sediment. FEMS Microbiol. Ecol. 1994, 14:1-8.
    • (1994) FEMS Microbiol. Ecol. , vol.14 , pp. 1-8
    • Isaksen, M.F.1    Bak, F.2    Jørgensen, B.B.3
  • 19
    • 81055130204 scopus 로고    scopus 로고
    • Deep subseafloor microbial cells on physiological standby
    • Jørgensen B.B. Deep subseafloor microbial cells on physiological standby. Proc. Natl. Acad. Sci. U.S.A. 2011, 108:18193-18194.
    • (2011) Proc. Natl. Acad. Sci. U.S.A. , vol.108 , pp. 18193-18194
    • Jørgensen, B.B.1
  • 20
    • 33750985359 scopus 로고    scopus 로고
    • A starving majority deep beneath the seafloor
    • Jørgensen B.B., D'Hondt S. A starving majority deep beneath the seafloor. Science 2006, 314:932-934.
    • (2006) Science , vol.314 , pp. 932-934
    • Jørgensen, B.B.1    D'Hondt, S.2
  • 21
    • 77955586844 scopus 로고    scopus 로고
    • Role of sulfate reduction and methane production by organic carbon degradation in eutrophic fjord sediments (Limfjorden, Denmark)
    • Jørgensen B.B., Parkes R.J. Role of sulfate reduction and methane production by organic carbon degradation in eutrophic fjord sediments (Limfjorden, Denmark). Limnol. Oceanogr. 2010, 55:1338-1352.
    • (2010) Limnol. Oceanogr. , vol.55 , pp. 1338-1352
    • Jørgensen, B.B.1    Parkes, R.J.2
  • 22
    • 29444443033 scopus 로고    scopus 로고
    • Hydrolysis-induced racemization of amino acids
    • Kaiser K., Benner R. Hydrolysis-induced racemization of amino acids. Limnol. Oceanogr.-Methods 2005, 3:318-325.
    • (2005) Limnol. Oceanogr.-Methods , vol.3 , pp. 318-325
    • Kaiser, K.1    Benner, R.2
  • 23
    • 14644396355 scopus 로고    scopus 로고
    • A cold chromium distillation procedure for radiolabeled sulfide applied to sulfate reduction measurements
    • Kallmeyer J., Ferdelman T.G., Weber A., Fossing H., Jørgensen B.B. A cold chromium distillation procedure for radiolabeled sulfide applied to sulfate reduction measurements. Limnol. Oceanogr.-Methods 2004, 2:171-180.
    • (2004) Limnol. Oceanogr.-Methods , vol.2 , pp. 171-180
    • Kallmeyer, J.1    Ferdelman, T.G.2    Weber, A.3    Fossing, H.4    Jørgensen, B.B.5
  • 25
    • 0003146172 scopus 로고    scopus 로고
    • Early diagenesis of particulate amino acids in marine systems
    • Oxford University Press, G.A. Goodfriend, M.J. Collins, M.L. Fogel, S.A. Macko, J.F. Wehmiller (Eds.)
    • Keil R.G., Tsamakis E., Hedges J.I. Early diagenesis of particulate amino acids in marine systems. Perspectives in Amino Acid and Protein Geochemistry 2000, 69-82. Oxford University Press. G.A. Goodfriend, M.J. Collins, M.L. Fogel, S.A. Macko, J.F. Wehmiller (Eds.).
    • (2000) Perspectives in Amino Acid and Protein Geochemistry , pp. 69-82
    • Keil, R.G.1    Tsamakis, E.2    Hedges, J.I.3
  • 26
    • 0027043901 scopus 로고
    • Controls on organic carbon preservation: The use of stratified water bodies to compare intrinsic rates of decomposition in oxic and anoxic systems
    • Lee C. Controls on organic carbon preservation: The use of stratified water bodies to compare intrinsic rates of decomposition in oxic and anoxic systems. Geochimica et Cosmochimica Acta 1992, 56:3323-3335.
    • (1992) Geochimica et Cosmochimica Acta , vol.56 , pp. 3323-3335
    • Lee, C.1
  • 27
    • 24444436724 scopus 로고
    • High-performance liquid-chromatographic determination of subpicomole amounts of amino-acids by precolumn fluorescence derivatization with ortho-phthaldialdehyde
    • Lindroth P., Mopper K. High-performance liquid-chromatographic determination of subpicomole amounts of amino-acids by precolumn fluorescence derivatization with ortho-phthaldialdehyde. Anal. Chem. 1979, 51:1667-1674.
    • (1979) Anal. Chem. , vol.51 , pp. 1667-1674
    • Lindroth, P.1    Mopper, K.2
  • 28
    • 50049107012 scopus 로고    scopus 로고
    • Significant contribution of Archaea to extant biomass in marine subsurface sediments
    • Lipp J.S., Morono Y., Inagaki F., Hinrichs K.U. Significant contribution of Archaea to extant biomass in marine subsurface sediments. Nature 2008, 454:991-994.
    • (2008) Nature , vol.454 , pp. 991-994
    • Lipp, J.S.1    Morono, Y.2    Inagaki, F.3    Hinrichs, K.U.4
  • 29
    • 84861815896 scopus 로고    scopus 로고
    • Pre-column liquid chromatographic determination of dipicolinic acid from bacterial endospores
    • Lomstein B.Aa., Jørgensen B.B. Pre-column liquid chromatographic determination of dipicolinic acid from bacterial endospores. Limnol. Oceanogr.-Methods 2012, 10:227-233.
    • (2012) Limnol. Oceanogr.-Methods , vol.10 , pp. 227-233
    • Lomstein, B.1    Jørgensen, B.B.2
  • 31
    • 84859468966 scopus 로고    scopus 로고
    • Endospore abundance, microbial growth and necromass turnover in deep subseafloor sediment
    • Lomstein B.Aa., Langerhuus A.T., D'Hondt S., Jørgensen B.B., Spivack A. Endospore abundance, microbial growth and necromass turnover in deep subseafloor sediment. Nature 2012, 484:101-104.
    • (2012) Nature , vol.484 , pp. 101-104
    • Lomstein, B.1    Langerhuus, A.T.2    D'Hondt, S.3    Jørgensen, B.B.4    Spivack, A.5
  • 32
    • 67650837948 scopus 로고    scopus 로고
    • Accumulation of prokaryotic remains during organic matter diagenesis in surface sediments off Peru
    • Lomstein B.Aa., Niggemann J., Jørgensen B.B., Langerhuus A.T. Accumulation of prokaryotic remains during organic matter diagenesis in surface sediments off Peru. Limnol. Oceanogr. 2009, 54:1139-1151.
    • (2009) Limnol. Oceanogr. , vol.54 , pp. 1139-1151
    • Lomstein, B.1    Niggemann, J.2    Jørgensen, B.B.3    Langerhuus, A.T.4
  • 33
    • 0024568505 scopus 로고
    • A simple rate model for organic matter decomposition in marine sediments
    • Middelburg J.J. A simple rate model for organic matter decomposition in marine sediments. Geochim. Cosmochim. Acta 1989, 53:1577-1581.
    • (1989) Geochim. Cosmochim. Acta , vol.53 , pp. 1577-1581
    • Middelburg, J.J.1
  • 34
    • 0000691871 scopus 로고
    • Extraction and analysis of polysaccharides, chiral amino-acids, and SFE-extractable lipids from marine POM
    • Mopper K., Furton K.G. Extraction and analysis of polysaccharides, chiral amino-acids, and SFE-extractable lipids from marine POM. Mar. Part.: Anal. Charact. 1991, 63:151-161.
    • (1991) Mar. Part.: Anal. Charact. , vol.63 , pp. 151-161
    • Mopper, K.1    Furton, K.G.2
  • 35
    • 78651588216 scopus 로고    scopus 로고
    • Automatic slide-loader fluorescence microscope for discriminative enumeration of subseafloor life
    • Morono Y., Inagaki F. Automatic slide-loader fluorescence microscope for discriminative enumeration of subseafloor life. Sci. Drill. 2009, 9:32-36.
    • (2009) Sci. Drill. , vol.9 , pp. 32-36
    • Morono, Y.1    Inagaki, F.2
  • 36
    • 67349284715 scopus 로고    scopus 로고
    • Discriminative detection and enumeration of microbial life in marine subsurface sediments
    • Morono Y., Terada T., Masui N., Inagaki F. Discriminative detection and enumeration of microbial life in marine subsurface sediments. ISME J. 2009, 3:503-511.
    • (2009) ISME J. , vol.3 , pp. 503-511
    • Morono, Y.1    Terada, T.2    Masui, N.3    Inagaki, F.4
  • 38
    • 33645927962 scopus 로고    scopus 로고
    • Sources and fate of amino sugars in coastal Peruvian sediments
    • Niggemann J., Schubert C.J. Sources and fate of amino sugars in coastal Peruvian sediments. Geochim. Cosmochim. Acta 2006, 70:2229-2237.
    • (2006) Geochim. Cosmochim. Acta , vol.70 , pp. 2229-2237
    • Niggemann, J.1    Schubert, C.J.2
  • 39
    • 0043068300 scopus 로고    scopus 로고
    • Amino acid remineralization and organic matter lability in Chilean coastal sediments
    • Pantoja S., Lee C. Amino acid remineralization and organic matter lability in Chilean coastal sediments. Org. Geochem. 2003, 34:1047-1056.
    • (2003) Org. Geochem. , vol.34 , pp. 1047-1056
    • Pantoja, S.1    Lee, C.2
  • 40
    • 0027807972 scopus 로고
    • A quantitative study of microbial decomposition of biopolymers in Recent sediments from the Peru Margin
    • Parkes R.J., Cragg B.A., Getliff J.M., Harvey S.M., Fry J.C., Lewis C.A., Rowland S.J. A quantitative study of microbial decomposition of biopolymers in Recent sediments from the Peru Margin. Mar. Geol. 1993, 113:55-66.
    • (1993) Mar. Geol. , vol.113 , pp. 55-66
    • Parkes, R.J.1    Cragg, B.A.2    Getliff, J.M.3    Harvey, S.M.4    Fry, J.C.5    Lewis, C.A.6    Rowland, S.J.7
  • 41
    • 0347794946 scopus 로고    scopus 로고
    • Recent studies on bacterial populations and processes in subseafloor sediments: a review
    • Parkes R.J., Cragg B.A., Wellsbury P. Recent studies on bacterial populations and processes in subseafloor sediments: a review. Hydrogeol. J. 2000, 8:11-28.
    • (2000) Hydrogeol. J. , vol.8 , pp. 11-28
    • Parkes, R.J.1    Cragg, B.A.2    Wellsbury, P.3
  • 42
    • 0034835261 scopus 로고    scopus 로고
    • Bacterial influence on amino acid enantiomerization in a coastal marine sediment
    • Pedersen A.G.U., Thomsen T.R., Lomstein B.Aa., Jørgensen N.O.G. Bacterial influence on amino acid enantiomerization in a coastal marine sediment. Limnol. Oceanogr. 2001, 46:1358-1369.
    • (2001) Limnol. Oceanogr. , vol.46 , pp. 1358-1369
    • Pedersen, A.G.U.1    Thomsen, T.R.2    Lomstein, B.3    Jørgensen, N.O.G.4
  • 43
    • 0030613082 scopus 로고    scopus 로고
    • Survival and activity of bacteria in a deep, aged lake sediment (Lake Constance)
    • Rothfuss F., Bender M., Conrad R. Survival and activity of bacteria in a deep, aged lake sediment (Lake Constance). Microb. Ecol. 1997, 33:69-77.
    • (1997) Microb. Ecol. , vol.33 , pp. 69-77
    • Rothfuss, F.1    Bender, M.2    Conrad, R.3
  • 45
    • 0027804722 scopus 로고
    • Production, transport, and alteration of particulate organic matter in the marine water column
    • Plenum Press, M.H. Engel, S.A. Macko (Eds.)
    • Wakeham S.G., Lee C. Production, transport, and alteration of particulate organic matter in the marine water column. Organic Geochemistry: Principles and Applications 1993, Plenum Press. M.H. Engel, S.A. Macko (Eds.).
    • (1993) Organic Geochemistry: Principles and Applications
    • Wakeham, S.G.1    Lee, C.2


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