-
1
-
-
84855867638
-
GenomeView: A next-generation genome browser
-
Abeel, T., Van Parys, T., Saeys, Y., Galagan, J. and Van de Peer, Y. (2012). GenomeView: a next-generation genome browser. Nucleic Acids Res. 40, e12.
-
(2012)
Nucleic Acids Res
, vol.40
-
-
Abeel, T.1
Van Parys, T.2
Saeys, Y.3
Galagan, J.4
Van de Peer, Y.5
-
2
-
-
77958471357
-
Differential expression analysis for sequence count data
-
Anders, S. and Huber, W. (2010). Differential expression analysis for sequence count data. Genome Biol. 11, R106.
-
(2010)
Genome Biol
, vol.11
, pp. 106
-
-
Anders, S.1
Huber, W.2
-
3
-
-
84907143655
-
HTSeq—A Python framework to work with high-throughput sequencing data
-
Anders, S., Pyl, P. T. and Huber, W. (2014). HTSeq—A Python framework to work with high-throughput sequencing data. BioRxiv doi:10.1101/002824.
-
(2014)
Biorxiv
-
-
Anders, S.1
Pyl, P.T.2
Huber, W.3
-
4
-
-
84864805609
-
AP2-type transcription factors determine stem cell identity in the moss Physcomitrella patens
-
Aoyama, T., Hiwatashi, Y., Shigyo, M., Kofuji, R., Kubo, M., Ito, M. and Hasebe, M. (2012). AP2-type transcription factors determine stem cell identity in the moss Physcomitrella patens. Development 139, 3120-3129.
-
(2012)
Development
, vol.139
, pp. 3120-3129
-
-
Aoyama, T.1
Hiwatashi, Y.2
Shigyo, M.3
Kofuji, R.4
Kubo, M.5
Ito, M.6
Hasebe, M.7
-
5
-
-
6044252163
-
The genome of the diatom Thalassiosira pseudonana: Ecology, evolution, and metabolism
-
Armbrust, E. V., Berges, J. A., Bowler, C., Green, B. R., Martinez, D., Putnam, N. H., Zhou, S., Allen, A. E., Apt, K. E., Bechner, M. et al. (2004). The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Science 306, 79-86.
-
(2004)
Science
, vol.306
, pp. 79-86
-
-
Armbrust, E.V.1
Berges, J.A.2
Bowler, C.3
Green, B.R.4
Martinez, D.5
Putnam, N.H.6
Zhou, S.7
Allen, A.E.8
Apt, K.E.9
Bechner, M.10
-
6
-
-
78049477633
-
The Chlorella variabilis NC64A genome reveals adaptation to photosymbiosis, coevolution with viruses, and cryptic sex
-
Blanc, G., Duncan, G., Agarkova, I., Borodovsky, M., Gurnon, J., Kuo, A., Lindquist, E., Lucas, S., Pangilinan, J., Polle, J. et al. (2010). The Chlorella variabilis NC64A genome reveals adaptation to photosymbiosis, coevolution with viruses, and cryptic sex. Plant Cell 22, 2943-2955.
-
(2010)
Plant Cell
, vol.22
, pp. 2943-2955
-
-
Blanc, G.1
Duncan, G.2
Agarkova, I.3
Borodovsky, M.4
Gurnon, J.5
Kuo, A.6
Lindquist, E.7
Lucas, S.8
Pangilinan, J.9
Polle, J.10
-
7
-
-
84890968181
-
Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel production
-
Bogen, C., Al-Dilaimi, A., Albersmeier, A., Wichmann, J., Grundmann, M., Rupp, O., Lauersen, K. J., Blifernez-Klassen, O., Kalinowski, J., Goesmann, A. et al. (2013). Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel production. BMC Genomics 14, 926.
-
(2013)
BMC Genomics
, vol.14
, pp. 926
-
-
Bogen, C.1
Al-Dilaimi, A.2
Albersmeier, A.3
Wichmann, J.4
Grundmann, M.5
Rupp, O.6
Lauersen, K.J.7
Blifernez-Klassen, O.8
Kalinowski, J.9
Goesmann, A.10
-
8
-
-
33646290385
-
On antithetic as distinct from homologous alternation of generations in plants
-
Bower, F. O. (1890). On antithetic as distinct from homologous alternation of generations in plants. Ann. Bot. 4, 347-370.
-
(1890)
Ann. Bot
, vol.4
, pp. 347-370
-
-
Bower, F.O.1
-
9
-
-
56249098614
-
The Phaeodactylum genome reveals the evolutionary history of diatom genomes
-
Bowler, C., Allen, A. E., Badger, J. H., Grimwood, J., Jabbari, K., Kuo, A., Maheswari, U., Martens, C., Maumus, F., Otillar, R. P. et al. (2008). The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Nature 456, 239-244.
-
(2008)
Nature
, vol.456
, pp. 239-244
-
-
Bowler, C.1
Allen, A.E.2
Badger, J.H.3
Grimwood, J.4
Jabbari, K.5
Kuo, A.6
Maheswari, U.7
Martens, C.8
Maumus, F.9
Otillar, R.P.10
-
10
-
-
0035859929
-
Specific inhibition of gene expression by small double-stranded RNAs in invertebrate and vertebrate systems
-
Caplen, N. J., Parrish, S., Imani, F., Fire, A. and Morgan, R. A. (2001). Specific inhibition of gene expression by small double-stranded RNAs in invertebrate and vertebrate systems. Proc. Natl. Acad. Sci. USA 98, 9742-9747.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 9742-9747
-
-
Caplen, N.J.1
Parrish, S.2
Imani, F.3
Fire, A.4
Morgan, R.A.5
-
11
-
-
51349150475
-
Ueber die verschiedenen Formen und die Bedeutung des Generationwechsels der Pflanzen
-
Celakovsky, L. (1874). Ueber die verschiedenen Formen und die Bedeutung des Generationwechsels der Pflanzen. Sitzungsber. K. Boehmischen Ges. Wiss. Prague 2, 21-61.
-
(1874)
Sitzungsber. K. Boehmischen Ges. Wiss. Prague
, vol.2
, pp. 21-61
-
-
Celakovsky, L.1
-
12
-
-
77953001382
-
The Ectocarpus genome and the independent evolution of multicellularity in brown algae
-
Cock, J. M., Sterck, L., Rouzé, P., Scornet, D., Allen, A. E., Amoutzias, G., Anthouard, V., Artiguenave, F., Aury, J.-M., Badger, J. H. et al. (2010). The Ectocarpus genome and the independent evolution of multicellularity in brown algae. Nature 465, 617-621.
-
(2010)
Nature
, vol.465
, pp. 617-621
-
-
Cock, J.M.1
Sterck, L.2
Rouzé, P.3
Scornet, D.4
Allen, A.E.5
Amoutzias, G.6
Anthouard, V.7
Artiguenave, F.8
Aury, J.-M.9
Badger, J.H.10
-
13
-
-
84893485584
-
Evolution and regulation of complex life cycles: A brown algal perspective
-
Cock, J. M., Godfroy, O., Macaisne, N., Peters, A. F. and Coelho, S. M. (2014). Evolution and regulation of complex life cycles: a brown algal perspective. Curr. Opin. Plant Biol. 17, 1-6.
-
(2014)
Curr. Opin. Plant Biol
, vol.17
, pp. 1-6
-
-
Cock, J.M.1
Godfroy, O.2
Macaisne, N.3
Peters, A.F.4
Coelho, S.M.5
-
14
-
-
84990935512
-
Emergence of Ectocarpus as a model system to study the evolution of complex multicellularity in the brown algae
-
I. Ruiz-Trillo and A. M. Nedelcu), Dordrecht: Springer
-
Cock, J. M., Godfroy, O., Strittmatter, M., Scornet, D., Uji, T., Farnham, G., Peters, A. F. and Coelho, S. M. (2015). Emergence of Ectocarpus as a model system to study the evolution of complex multicellularity in the brown algae. In Evolutionary Transitions to Multicellular Life (ed. I. Ruiz-Trillo and A. M. Nedelcu), pp. 153-162. Dordrecht: Springer.
-
(2015)
In Evolutionary Transitions to Multicellular Life
, pp. 153-162
-
-
Cock, J.M.1
Godfroy, O.2
Strittmatter, M.3
Scornet, D.4
Uji, T.5
Farnham, G.6
Peters, A.F.7
Coelho, S.M.8
-
15
-
-
36849024982
-
Complex life cycles of multicellular eukaryotes: New approaches based on the use of model organisms
-
Coelho, S. M., Peters, A. F., Charrier, B., Roze, D., Destombe, C., Valero, M. and Cock, J. M. (2007). Complex life cycles of multicellular eukaryotes: new approaches based on the use of model organisms. Gene 406, 152-170.
-
(2007)
Gene
, vol.406
, pp. 152-170
-
-
Coelho, S.M.1
Peters, A.F.2
Charrier, B.3
Roze, D.4
Destombe, C.5
Valero, M.6
Cock, J.M.7
-
16
-
-
79960972542
-
OUROBOROS is a master regulator of the gametophyte to sporophyte life cycle transition in the brown alga Ectocarpus
-
Coelho, S. M., Godfroy, O., Arun, A., Le Corguillé, G., Peters, A. F. and Cock, J. M. (2011). OUROBOROS is a master regulator of the gametophyte to sporophyte life cycle transition in the brown alga Ectocarpus. Proc. Natl. Acad. Sci. USA 108, 11518-11523.
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 11518-11523
-
-
Coelho, S.M.1
Godfroy, O.2
Arun, A.3
Le Corguillé, G.4
Peters, A.F.5
Cock, J.M.6
-
17
-
-
84856412462
-
Ectocarpus: A model organism for the brown algae. Cold Spring Harb
-
Coelho, S. M., Scornet, D., Rousvoal, S., Peters, N., Dartevelle, L., Peters, A. F. and Cock, J. M. (2012a). Ectocarpus: a model organism for the brown algae. Cold Spring Harb. Protoc. 2012, 193-198.
-
(2012)
Protoc
, vol.2012
, pp. 193-198
-
-
Coelho, S.M.1
Scornet, D.2
Rousvoal, S.3
Peters, N.4
Dartevelle, L.5
Peters, A.F.6
Cock, J.M.7
-
18
-
-
84856427807
-
How to cultivate Ectocarpus
-
Coelho, S. M., Scornet, D., Rousvoal, S., Peters, N. T., Dartevelle, L., Peters, A. F. and Cock, J. M. (2012b). How to cultivate Ectocarpus. Cold Spring Harb. Protoc. 2012, 258-261.
-
(2012)
Cold Spring Harb. Protoc
, vol.2012
, pp. 258-261
-
-
Coelho, S.M.1
Scornet, D.2
Rousvoal, S.3
Peters, N.T.4
Dartevelle, L.5
Peters, A.F.6
Cock, J.M.7
-
19
-
-
84937678519
-
Evolution and maintenance of haploid-diploid life cycles in natural populations: The case of the marine brown alga Ectocarpus
-
Couceiro, L., Le Gac, M., Hunsperger, H. M., Mauger, S., Destombe, C., Cock, J. M., Ahmed, S., Coelho, S. M., Valero, M. and Peters, A. F. (2015). Evolution and maintenance of haploid-diploid life cycles in natural populations: the case of the marine brown alga Ectocarpus. Evol. Int. J. Org. Evol. 69, 1808-1822.
-
(2015)
Evol. Int. J. Org. Evol
, vol.69
, pp. 1808-1822
-
-
Couceiro, L.1
Le Gac, M.2
Hunsperger, H.M.3
Mauger, S.4
Destombe, C.5
Cock, J.M.6
Ahmed, S.7
Coelho, S.M.8
Valero, M.9
Peters, A.F.10
-
20
-
-
3142756502
-
Open source clustering software
-
de Hoon, M. J. L., Imoto, S., Nolan, J. and Miyano, S. (2004). Open source clustering software. Bioinformatics 20, 1453-1454.
-
(2004)
Bioinformatics
, vol.20
, pp. 1453-1454
-
-
de Hoon, M.J.L.1
Imoto, S.2
Nolan, J.3
Miyano, S.4
-
21
-
-
0035881839
-
The complete DNA sequence of the Ectocarpus siliculosus virus EsV-1 genome
-
Delaroque, N., Müller, D. G., Bothe, G., Pohl, T., Knippers, R. and Boland, W. (2001). The complete DNA sequence of the Ectocarpus siliculosus virus EsV-1 genome. Virology 287, 112-132.
-
(2001)
Virology
, vol.287
, pp. 112-132
-
-
Delaroque, N.1
Müller, D.G.2
Bothe, G.3
Pohl, T.4
Knippers, R.5
Boland, W.6
-
22
-
-
58149295496
-
Body building on land: Morphological evolution of land plants
-
Dolan, L. (2009). Body building on land: morphological evolution of land plants. Curr. Opin. Plant Biol. 12, 4-8.
-
(2009)
Curr. Opin. Plant Biol
, vol.12
, pp. 4-8
-
-
Dolan, L.1
-
23
-
-
84884988020
-
Gene silencing in Fucus embryos: Developmental consequences of RNAimediated cytoskeletal disruption
-
Farnham, G., Strittmatter, M., Coelho, S. M., Cock, J. M. and Brownlee, C. (2013). Gene silencing in Fucus embryos: developmental consequences of RNAimediated cytoskeletal disruption. J. Phycol. 49, 819-829.
-
(2013)
J. Phycol
, vol.49
, pp. 819-829
-
-
Farnham, G.1
Strittmatter, M.2
Coelho, S.M.3
Cock, J.M.4
Brownlee, C.5
-
25
-
-
79952725430
-
Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics
-
Gobler, C. J., Berry, D. L., Dyhrman, S. T., Wilhelm, S. W., Salamov, A., Lobanov, A. V., Zhang, Y., Collier, J. L., Wurch, L. L., Kustka, A. B. et al. (2011). Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics. Proc. Natl. Acad. Sci. USA 108, 4352-4357.
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 4352-4357
-
-
Gobler, C.J.1
Berry, D.L.2
Dyhrman, S.T.3
Wilhelm, S.W.4
Salamov, A.5
Lobanov, A.V.6
Zhang, Y.7
Collier, J.L.8
Wurch, L.L.9
Kustka, A.B.10
-
26
-
-
74549125386
-
SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building. Mol. Biol
-
Gouy, M., Guindon, S. and Gascuel, O. (2010). SeaView version 4: a multiplatform graphical user interface for sequence alignment and phylogenetic tree building. Mol. Biol. Evol. 27, 221-224.
-
(2010)
Evol
, vol.27
, pp. 221-224
-
-
Gouy, M.1
Guindon, S.2
Gascuel, O.3
-
27
-
-
33646554467
-
Sexual conflict and the alternation of haploid and diploid generations
-
Haig, D. and Wilczek, A. (2006). Sexual conflict and the alternation of haploid and diploid generations. Philos. Trans. R. Soc. Lond. B Biol. Sci. 361, 335-343.
-
(2006)
Philos. Trans. R. Soc. Lond. B Biol. Sci
, vol.361
, pp. 335-343
-
-
Haig, D.1
Wilczek, A.2
-
28
-
-
77956288770
-
A sequence-tagged genetic map for the brown alga Ectocarpus siliculosus provides large-scale assembly of the genome sequence
-
Heesch, S., Cho, G. Y., Peters, A. F., Le Corguillé, G., Falentin, C., Boutet, G., Coëdel, S., Jubin, C., Samson, G., Corre, E. et al. (2010). A sequence-tagged genetic map for the brown alga Ectocarpus siliculosus provides large-scale assembly of the genome sequence. New Phytol. 188, 42-51.
-
(2010)
New Phytol
, vol.188
, pp. 42-51
-
-
Heesch, S.1
Cho, G.Y.2
Peters, A.F.3
Le Corguillé, G.4
Falentin, C.5
Boutet, G.6
Coëdel, S.7
Jubin, C.8
Samson, G.9
Corre, E.10
-
29
-
-
77954304698
-
E-RNAi: A web application for the multi-species design of RNAi reagents–2010 update
-
Horn, T. and Boutros, M. (2010). E-RNAi: a web application for the multi-species design of RNAi reagents–2010 update. Nucleic Acids Res. 38, W332-W339.
-
(2010)
Nucleic Acids Res
, vol.38
, pp. W332-W339
-
-
Horn, T.1
Boutros, M.2
-
30
-
-
0042428775
-
Schizocladia ischiensis: A new filamentous marine chromophyte belonging to a new class, Schizocladiophyceae
-
Kawai, H., Maeba, S., Sasaki, H., Okuda, K. and Henry, E. C. (2003). Schizocladia ischiensis: a new filamentous marine chromophyte belonging to a new class, Schizocladiophyceae. Protist 154, 211-228.
-
(2003)
Protist
, vol.154
, pp. 211-228
-
-
Kawai, H.1
Maeba, S.2
Sasaki, H.3
Okuda, K.4
Henry, E.C.5
-
31
-
-
84944736735
-
Molecular phylogeny of two unusual brown algae, Phaeostrophion irregulare and Platysiphon glacialis, proposal of the Stschapoviales ord. Nov. and Platysiphonaceae fam. nov., and a re-examination of divergence times for brown algal orders
-
Kawai, H., Hanyuda, T., Draisma, S. G. A., Wilce, R. T. and Andersen, R. A. (2015). Molecular phylogeny of two unusual brown algae, Phaeostrophion irregulare and Platysiphon glacialis, proposal of the Stschapoviales ord. nov. and Platysiphonaceae fam. nov., and a re-examination of divergence times for brown algal orders. J. Phycol. 51, 918-928.
-
(2015)
J. Phycol
, vol.51
, pp. 918-928
-
-
Kawai, H.1
Hanyuda, T.2
Draisma, S.G.A.3
Wilce, R.T.4
Andersen, R.A.5
-
32
-
-
84876996918
-
TopHat2: Accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
-
Kim, D., Pertea, G., Trapnell, C., Pimentel, H., Kelley, R. and Salzberg, S. L. (2013). TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions. Genome Biol. 14, R36.
-
(2013)
Genome Biol
, vol.14
, pp. 36
-
-
Kim, D.1
Pertea, G.2
Trapnell, C.3
Pimentel, H.4
Kelley, R.5
Salzberg, S.L.6
-
33
-
-
84899129604
-
Co-option of a photoperiodic growth-phase transition system during land plant evolution
-
Kubota, A., Kita, S., Ishizaki, K., Nishihama, R., Yamato, K. T. and Kohchi, T. (2014). Co-option of a photoperiodic growth-phase transition system during land plant evolution. Nat. Commun. 5, 3668.
-
(2014)
Nat. Commun
, vol.5
, pp. 3668
-
-
Kubota, A.1
Kita, S.2
Ishizaki, K.3
Nishihama, R.4
Yamato, K.T.5
Kohchi, T.6
-
34
-
-
84979851519
-
The EMBL-EBI bioinformatics web and programmatic tools framework
-
Li, W., Cowley, A., Uludag, M., Gur, T., McWilliam, H., Squizzato, S., Park, Y. M., Buso, N. and Lopez, R. (2015). The EMBL-EBI bioinformatics web and programmatic tools framework. Nucleic Acids Res. 43, W580-W584.
-
(2015)
Nucleic Acids Res
, vol.43
, pp. W580-W584
-
-
Li, W.1
Cowley, A.2
Uludag, M.3
Gur, T.4
McWilliam, H.5
Squizzato, S.6
Park, Y.M.7
Buso, N.8
Lopez, R.9
-
35
-
-
84930751179
-
Sexual dimorphism and the evolution of sex-biased gene expression in the brown alga Ectocarpus
-
Lipinska, A., Cormier, A., Luthringer, R., Peters, A. F., Corre, E., Gachon, C. M. M., Cock, J. M. and Coelho, S. M. (2015). Sexual dimorphism and the evolution of sex-biased gene expression in the brown alga Ectocarpus. Mol. Biol. Evol. 32, 1581-1597.
-
(2015)
Mol. Biol. Evol
, vol.32
, pp. 1581-1597
-
-
Lipinska, A.1
Cormier, A.2
Luthringer, R.3
Peters, A.F.4
Corre, E.5
Gachon, C.M.M.6
Cock, J.M.7
Coelho, S.M.8
-
36
-
-
84924629414
-
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
-
Love, M. I., Huber, W. and Anders, S. (2014). Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biol. 15, 550.
-
(2014)
Genome Biol
, vol.15
, pp. 550
-
-
Love, M.I.1
Huber, W.2
Anders, S.3
-
37
-
-
34250174230
-
An ancient mechanism controls the development of cells with a rooting function in land plants
-
Menand, B., Yi, K., Jouannic, S., Hoffmann, L., Ryan, E., Linstead, P., Schaefer, D. G. and Dolan, L. (2007). An ancient mechanism controls the development of cells with a rooting function in land plants. Science 316, 1477-1480.
-
(2007)
Science
, vol.316
, pp. 1477-1480
-
-
Menand, B.1
Yi, K.2
Jouannic, S.3
Hoffmann, L.4
Ryan, E.5
Linstead, P.6
Schaefer, D.G.7
Dolan, L.8
-
38
-
-
84865319982
-
Gene functionalities and genome structure in Bathycoccus prasinos reflect cellular specializations at the base of the green lineage
-
Moreau, H., Verhelst, B., Couloux, A., Derelle, E., Rombauts, S., Grimsley, N., Van Bel, M., Poulain, J., Katinka, M., Hohmann-Marriott, M. F. et al. (2012). Gene functionalities and genome structure in Bathycoccus prasinos reflect cellular specializations at the base of the green lineage. Genome Biol. 13, R74.
-
(2012)
Genome Biol
, vol.13
, pp. 74
-
-
Moreau, H.1
Verhelst, B.2
Couloux, A.3
Derelle, E.4
Rombauts, S.5
Grimsley, N.6
Van Bel, M.7
Poulain, J.8
Katinka, M.9
Hohmann-Marriott, M.F.10
-
39
-
-
71249116114
-
The evolution of the land plant life cycle
-
Niklas, K. J. and Kutschera, U. (2010). The evolution of the land plant life cycle. New Phytol. 185, 27-41.
-
(2010)
New Phytol
, vol.185
, pp. 27-41
-
-
Niklas, K.J.1
Kutschera, U.2
-
40
-
-
0038270852
-
Comparative genomics of Physcomitrella patens gametophytic transcriptome and Arabidopsis thaliana: Implication for land plant evolution
-
Nishiyama, T., Fujita, T., Shin-I. T., Seki, M., Nishide, H., Uchiyama, I., Kamiya, A., Carninci, P., Hayashizaki, Y., Shinozaki, K. et al. (2003). Comparative genomics of Physcomitrella patens gametophytic transcriptome and Arabidopsis thaliana: implication for land plant evolution. Proc. Natl. Acad. Sci. USA 100, 8007-8012.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 8007-8012
-
-
Nishiyama, T.1
Fujita, T.2
Shin, T.3
Seki, M.4
Nishide, H.5
Uchiyama, I.6
Kamiya, A.7
Carninci, P.8
Hayashizaki, Y.9
Shinozaki, K.10
-
41
-
-
44449150247
-
Life-cycle-generation-specific developmental processes are modified in the immediate upright mutant of the brown alga Ectocarpus siliculosus
-
Peters, A. F., Scornet, D., Ratin, M., Charrier, B., Monnier, A., Merrien, Y., Corre, E., Coelho, S. M. and Cock, J. M. (2008). Life-cycle-generation-specific developmental processes are modified in the immediate upright mutant of the brown alga Ectocarpus siliculosus. Development 135, 1503-1512.
-
(2008)
Development
, vol.135
, pp. 1503-1512
-
-
Peters, A.F.1
Scornet, D.2
Ratin, M.3
Charrier, B.4
Monnier, A.5
Merrien, Y.6
Corre, E.7
Coelho, S.M.8
Cock, J.M.9
-
42
-
-
84855696745
-
Morphological evolution in land plants: New designs with old genes
-
Pires, N. D. and Dolan, L. (2012). Morphological evolution in land plants: new designs with old genes. Philos. Trans. R. Soc. Lond. B Biol. Sci. 367, 508-518.
-
(2012)
Philos. Trans. R. Soc. Lond. B Biol. Sci
, vol.367
, pp. 508-518
-
-
Pires, N.D.1
Dolan, L.2
-
43
-
-
56849112458
-
Phylogeny and evolution of charophytic algae and land plants
-
Qiu, Y.-L. (2008). Phylogeny and evolution of charophytic algae and land plants. J. Syst. Evol. 46, 287-306.
-
(2008)
J. Syst. Evol
, vol.46
, pp. 287-306
-
-
Qiu, Y.-L.1
-
44
-
-
33750303564
-
The deepest divergences in land plants inferred from phylogenomic evidence
-
Qiu, Y.-L., Li, L., Wang, B., Chen, Z., Knoop, V., Groth-Malonek, M., Dombrovska, O., Lee, J., Kent, L., Rest, J. et al. (2006). The deepest divergences in land plants inferred from phylogenomic evidence. Proc. Natl. Acad. Sci. USA 103, 15511-15516.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 15511-15516
-
-
Qiu, Y.-L.1
Li, L.2
Wang, B.3
Chen, Z.4
Knoop, V.5
Groth-Malonek, M.6
Dombrovska, O.7
Lee, J.8
Kent, L.9
Rest, J.10
-
46
-
-
84880511242
-
Pan genome of the phytoplankton Emiliania underpins its global distribution
-
Read, B. A., Kegel, J., Klute, M. J., Kuo, A., Lefebvre, S. C., Maumus, F., Mayer, C., Miller, J., Monier, A., Salamov, A. et al. (2013). Pan genome of the phytoplankton Emiliania underpins its global distribution. Nature 499, 209-213.
-
(2013)
Nature
, vol.499
, pp. 209-213
-
-
Read, B.A.1
Kegel, J.2
Klute, M.J.3
Kuo, A.4
Lefebvre, S.C.5
Maumus, F.6
Mayer, C.7
Miller, J.8
Monier, A.9
Salamov, A.10
-
47
-
-
9444225935
-
Java Treeview–extensible visualization of microarray data
-
Saldanha, A. J. (2004). Java Treeview–extensible visualization of microarray data. Bioinformatics 20, 3246-3248.
-
(2004)
Bioinformatics
, vol.20
, pp. 3246-3248
-
-
Saldanha, A.J.1
-
48
-
-
13444262397
-
KNOX homeobox genes potentially have similar function in both diploid unicellular and multicellular meristems, but not in haploid meristems
-
Sano, R., Juarez, C. M., Hass, B., Sakakibara, K., Ito, M., Banks, J. A. and Hasebe, M. (2005). KNOX homeobox genes potentially have similar function in both diploid unicellular and multicellular meristems, but not in haploid meristems. Evol. Dev. 7, 69-78.
-
(2005)
Evol. Dev
, vol.7
, pp. 69-78
-
-
Sano, R.1
Juarez, C.M.2
Hass, B.3
Sakakibara, K.4
Ito, M.5
Banks, J.A.6
Hasebe, M.7
-
49
-
-
79952750087
-
Bryophyte diversity and evolution: Windows into the early evolution of land plants
-
Shaw, A. J., Szovenyi, P. and Shaw, B. (2011). Bryophyte diversity and evolution: windows into the early evolution of land plants. Am. J. Bot. 98, 352-369.
-
(2011)
Am. J. Bot
, vol.98
, pp. 352-369
-
-
Shaw, A.J.1
Szovenyi, P.2
Shaw, B.3
-
50
-
-
77953324852
-
A multi-locus time-calibrated phylogeny of the brown algae (Heterokonta, Ochrophyta, Phaeophyceae): Investigating the evolutionary nature of the “brown algal crown radiation”
-
Silberfeld, T., Leigh, J. W., Verbruggen, H., Cruaud, C., de Reviers, B. and Rousseau, F. (2010). A multi-locus time-calibrated phylogeny of the brown algae (Heterokonta, Ochrophyta, Phaeophyceae): investigating the evolutionary nature of the “brown algal crown radiation”. Mol. Phylogenet. Evol. 56, 659-674.
-
(2010)
Mol. Phylogenet. Evol
, vol.56
, pp. 659-674
-
-
Silberfeld, T.1
Leigh, J.W.2
Verbruggen, H.3
Cruaud, C.4
de Reviers, B.5
Rousseau, F.6
-
51
-
-
85032070461
-
UTEX-The culture collection of algae at the University of Texas at Austin 1993 list of cultures
-
Starr, R. C. and Zeikus, J. A. (1993). UTEX-The culture collection of algae at the University of Texas at Austin 1993 list of cultures. J. Phycol. 29 Suppl., 1-106.
-
(1993)
J. Phycol. 29 Suppl.
, pp. 1-106
-
-
Starr, R.C.1
Zeikus, J.A.2
-
52
-
-
84869065441
-
ORCAE: Online resource for community annotation of eukaryotes
-
Sterck, L., Billiau, K., Abeel, T., Rouzé, P. and Van de Peer, Y. (2012). ORCAE: online resource for community annotation of eukaryotes. Nat. Methods 9, 1041.
-
(2012)
Nat. Methods
, vol.9
, pp. 1041
-
-
Sterck, L.1
Billiau, K.2
Abeel, T.3
Rouzé, P.4
Van De Peer, Y.5
-
53
-
-
78650506885
-
Generation-biased gene expression in a bryophyte model system
-
Szovenyi, P., Rensing, S. A., Lang, D., Wray, G. A. and Shaw, A. J. (2011). Generation-biased gene expression in a bryophyte model system. Mol. Biol. Evol. 28, 803-812.
-
(2011)
Mol. Biol. Evol
, vol.28
, pp. 803-812
-
-
Szovenyi, P.1
Rensing, S.A.2
Lang, D.3
Wray, G.A.4
Shaw, A.J.5
-
54
-
-
34547803197
-
PAML 4: Phylogenetic analysis by maximum likelihood
-
Yang, Z. (2007). PAML 4: phylogenetic analysis by maximum likelihood. Mol. Biol. Evol. 24, 1586-1591.
-
(2007)
Mol. Biol. Evol
, vol.24
, pp. 1586-1591
-
-
Yang, Z.1
-
55
-
-
84928776671
-
Saccharina genomes provide novel insight into kelp biology
-
Ye, N., Zhang, X., Miao, M., Fan, X., Zheng, Y., Xu, D., Wang, J., Zhou, L., Wang, D., Gao, Y. et al. (2015). Saccharina genomes provide novel insight into kelp biology. Nat. Commun. 6, 6986.
-
(2015)
Nat. Commun
, vol.6
, pp. 6986
-
-
Ye, N.1
Zhang, X.2
Miao, M.3
Fan, X.4
Zheng, Y.5
Xu, D.6
Wang, J.7
Zhou, L.8
Wang, D.9
Gao, Y.10
|