-
1
-
-
84922621952
-
Function and information content of DNA methylation
-
Schubeler D. Function and information content of DNA methylation. Nature. 2015;517(7534):321-6.
-
(2015)
Nature
, vol.517
, Issue.7534
, pp. 321-326
-
-
Schubeler, D.1
-
2
-
-
84863986133
-
Functions of DNA methylation: islands, start sites, gene bodies and beyond
-
Jones PA. Functions of DNA methylation: islands, start sites, gene bodies and beyond. Nat Rev Genet. 2012;13(7):484-92.
-
(2012)
Nat Rev Genet
, vol.13
, Issue.7
, pp. 484-492
-
-
Jones, P.A.1
-
3
-
-
84899926466
-
BisQC: an operational pipeline for multiplexed bisulfite sequencing
-
Chen GG, Diallo AB, Poujol R, Nagy C, Staffa A, Vaillancourt K, Lutz PE, Ota V, Mash DC, Turecki G, et al. BisQC: an operational pipeline for multiplexed bisulfite sequencing. BMC Genomics. 2014;15(1):290.
-
(2014)
BMC Genomics
, vol.15
, Issue.1
, pp. 290
-
-
Chen, G.G.1
Diallo, A.B.2
Poujol, R.3
Nagy, C.4
Staffa, A.5
Vaillancourt, K.6
Lutz, P.E.7
Ota, V.8
Mash, D.C.9
Turecki, G.10
-
4
-
-
27144500218
-
Reduced representation bisulfite sequencing for comparative high-resolution DNA methylation analysis
-
Meissner A, Gnirke A, Bell GW, Ramsahoye B, Lander ES, Jaenisch R. Reduced representation bisulfite sequencing for comparative high-resolution DNA methylation analysis. Nucleic Acids Res. 2005;33(18):5868-77.
-
(2005)
Nucleic Acids Res
, vol.33
, Issue.18
, pp. 5868-5877
-
-
Meissner, A.1
Gnirke, A.2
Bell, G.W.3
Ramsahoye, B.4
Lander, E.S.5
Jaenisch, R.6
-
5
-
-
79952788617
-
Preparation of reduced representation bisulfite sequencing libraries for genome-scale DNA methylation profiling
-
Gu H, Smith ZD, Bock C, Boyle P, Gnirke A, Meissner A. Preparation of reduced representation bisulfite sequencing libraries for genome-scale DNA methylation profiling. Nat Protoc. 2011;6(4):468-81.
-
(2011)
Nat Protoc
, vol.6
, Issue.4
, pp. 468-481
-
-
Gu, H.1
Smith, Z.D.2
Bock, C.3
Boyle, P.4
Gnirke, A.5
Meissner, A.6
-
6
-
-
84892168013
-
Improved reduced representation bisulfite sequencing for epigenomic profiling of clinical samples
-
Lee YK, Jin S, Duan S, Lim YC, Ng DP, Lin XM, Yeo G, Ding C. Improved reduced representation bisulfite sequencing for epigenomic profiling of clinical samples. Biol Proced Online. 2014;16(1):1.
-
(2014)
Biol Proced Online
, vol.16
, Issue.1
, pp. 1
-
-
Lee, Y.K.1
Jin, S.2
Duan, S.3
Lim, Y.C.4
Ng, D.P.5
Lin, X.M.6
Yeo, G.7
Ding, C.8
-
7
-
-
84885368581
-
Focused, high accuracy 5-methylcytosine quantitation with base resolution by benchtop next-generation sequencing
-
Masser DR, Berg AS, Freeman WM. Focused, high accuracy 5-methylcytosine quantitation with base resolution by benchtop next-generation sequencing. Epigenetics Chromatin. 2013;6(1):33.
-
(2013)
Epigenetics Chromatin
, vol.6
, Issue.1
, pp. 33
-
-
Masser, D.R.1
Berg, A.S.2
Freeman, W.M.3
-
8
-
-
84922396236
-
Molecular convergence of neurodevelopmental disorders
-
Chen ES, Gigek CO, Rosenfeld JA, Diallo AB, Maussion G, Chen GG, Vaillancourt K, Lopez JP, Crapper L, Poujol R, et al. Molecular convergence of neurodevelopmental disorders. Am J Hum Genet. 2014;95(5):490-508.
-
(2014)
Am J Hum Genet
, vol.95
, Issue.5
, pp. 490-508
-
-
Chen, E.S.1
Gigek, C.O.2
Rosenfeld, J.A.3
Diallo, A.B.4
Maussion, G.5
Chen, G.G.6
Vaillancourt, K.7
Lopez, J.P.8
Crapper, L.9
Poujol, R.10
-
9
-
-
84899926466
-
BisQC: an operational pipeline for multiplexed bisulfite sequencing
-
Chen GG, Diallo AB, Poujol R, Nagy C, Staffa A, Vaillancourt K, Lutz PE, Ota VK, Mash DC, Turecki G, et al. BisQC: an operational pipeline for multiplexed bisulfite sequencing. BMC Genomics. 2014;15:290.
-
(2014)
BMC Genomics
, vol.15
, pp. 290
-
-
Chen, G.G.1
Diallo, A.B.2
Poujol, R.3
Nagy, C.4
Staffa, A.5
Vaillancourt, K.6
Lutz, P.E.7
Ota, V.K.8
Mash, D.C.9
Turecki, G.10
-
10
-
-
78649773164
-
Rapid, low-input, low-bias construction of shotgun fragment libraries by high-density in vitro transposition
-
Adey A, Morrison HG, Asan, Xun X, Kitzman JO, Turner EH, Stackhouse B, MacKenzie AP, Caruccio NC, Zhang X, et al. Rapid, low-input, low-bias construction of shotgun fragment libraries by high-density in vitro transposition. Genome Biol. 2010;11(12):R119.
-
(2010)
Genome Biol
, vol.11
, Issue.12
, pp. R119
-
-
Adey, A.1
Morrison, H.G.2
Asan, H.G.3
Xun, X.4
Kitzman, J.O.5
Turner, E.H.6
Stackhouse, B.7
MacKenzie, A.P.8
Caruccio, N.C.9
Zhang, X.10
-
11
-
-
84913593681
-
Tn5 transposase and tagmentation procedures for massively scaled sequencing projects
-
Picelli S, Bjorklund AK, Reinius B, Sagasser S, Winberg G, Sandberg R. Tn5 transposase and tagmentation procedures for massively scaled sequencing projects. Genome Res. 2014;24:2033-40.
-
(2014)
Genome Res.
, vol.24
, pp. 2033-2040
-
-
Picelli, S.1
Bjorklund, A.K.2
Reinius, B.3
Sagasser, S.4
Winberg, G.5
Sandberg, R.6
-
12
-
-
66149123748
-
The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain
-
Kriaucionis S, Heintz N. The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain. Science. 2009;324(5929):929-30.
-
(2009)
Science
, vol.324
, Issue.5929
, pp. 929-930
-
-
Kriaucionis, S.1
Heintz, N.2
-
13
-
-
66149146320
-
Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1
-
Tahiliani M, Koh KP, Shen Y, Pastor WA, Bandukwala H, Brudno Y, Agarwal S, Iyer LM, Liu DR, Aravind L, et al. Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1. Science. 2009;324(5929):930-5.
-
(2009)
Science
, vol.324
, Issue.5929
, pp. 930-935
-
-
Tahiliani, M.1
Koh, K.P.2
Shen, Y.3
Pastor, W.A.4
Bandukwala, H.5
Brudno, Y.6
Agarwal, S.7
Iyer, L.M.8
Liu, D.R.9
Aravind, L.10
-
14
-
-
84911493925
-
5-Hydroxymethylcytosine is a predominantly stable DNA modification
-
Bachman M, Uribe-Lewis S, Yang X, Williams M, Murrell A, Balasubramanian S. 5-Hydroxymethylcytosine is a predominantly stable DNA modification. Nat Chem. 2014;6(12):1049-55.
-
(2014)
Nat Chem
, vol.6
, Issue.12
, pp. 1049-1055
-
-
Bachman, M.1
Uribe-Lewis, S.2
Yang, X.3
Williams, M.4
Murrell, A.5
Balasubramanian, S.6
-
15
-
-
84871563384
-
MeCP2 binds to 5hmC enriched within active genes and accessible chromatin in the nervous system
-
Mellen M, Ayata P, Dewell S, Kriaucionis S, Heintz N. MeCP2 binds to 5hmC enriched within active genes and accessible chromatin in the nervous system. Cell. 2012;151(7):1417-30.
-
(2012)
Cell
, vol.151
, Issue.7
, pp. 1417-1430
-
-
Mellen, M.1
Ayata, P.2
Dewell, S.3
Kriaucionis, S.4
Heintz, N.5
-
16
-
-
79955538247
-
Hydroxylation of 5-methylcytosine by TET1 promotes active DNA demethylation in the adult brain
-
Guo JU, Su Y, Zhong C, Ming GL, Song H. Hydroxylation of 5-methylcytosine by TET1 promotes active DNA demethylation in the adult brain. Cell. 2011;145(3):423-34.
-
(2011)
Cell
, vol.145
, Issue.3
, pp. 423-434
-
-
Guo, J.U.1
Su, Y.2
Zhong, C.3
Ming, G.L.4
Song, H.5
-
17
-
-
84940534819
-
Characterizing 5-hydroxymethylcytosine in human prefrontal cortex at single base resolution
-
Gross JA, Pacis A, Chen GG, Barreiro LB, Ernst C, Turecki G. Characterizing 5-hydroxymethylcytosine in human prefrontal cortex at single base resolution. BMC Genomics. 2015;16:672.
-
(2015)
BMC Genomics
, vol.16
, pp. 672
-
-
Gross, J.A.1
Pacis, A.2
Chen, G.G.3
Barreiro, L.B.4
Ernst, C.5
Turecki, G.6
-
18
-
-
84945304337
-
Bacterial infection remodels the DNA methylation landscape of human dendritic cells
-
Pacis A, Tailleux L, Morin AM, Lambourne J, MacIsaac JL, Yotova V, Dumaine A, Danckaert A, Luca F, Grenier JC, et al. Bacterial infection remodels the DNA methylation landscape of human dendritic cells. Genome Res. 2015;25(12):1801-11.
-
(2015)
Genome Res
, vol.25
, Issue.12
, pp. 1801-1811
-
-
Pacis, A.1
Tailleux, L.2
Morin, A.M.3
Lambourne, J.4
MacIsaac, J.L.5
Yotova, V.6
Dumaine, A.7
Danckaert, A.8
Luca, F.9
Grenier, J.C.10
-
19
-
-
77749277177
-
The behaviour of 5-hydroxymethylcytosine in bisulfite sequencing
-
Huang Y, Pastor WA, Shen Y, Tahiliani M, Liu DR, Rao A. The behaviour of 5-hydroxymethylcytosine in bisulfite sequencing. PLoS One. 2010;5(1), e8888.
-
(2010)
PLoS One
, vol.5
, Issue.1
-
-
Huang, Y.1
Pastor, W.A.2
Shen, Y.3
Tahiliani, M.4
Liu, D.R.5
Rao, A.6
-
20
-
-
84861221693
-
Quantitative sequencing of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution
-
Booth MJ, Branco MR, Ficz G, Oxley D, Krueger F, Reik W, Balasubramanian S. Quantitative sequencing of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution. Science. 2012;336(6083):934-7.
-
(2012)
Science
, vol.336
, Issue.6083
, pp. 934-937
-
-
Booth, M.J.1
Branco, M.R.2
Ficz, G.3
Oxley, D.4
Krueger, F.5
Reik, W.6
Balasubramanian, S.7
-
21
-
-
84861990517
-
Base-resolution analysis of 5-hydroxymethylcytosine in the mammalian genome
-
Yu M, Hon GC, Szulwach KE, Song CX, Zhang L, Kim A, Li X, Dai Q, Shen Y, Park B, et al. Base-resolution analysis of 5-hydroxymethylcytosine in the mammalian genome. Cell. 2012;149(6):1368-80.
-
(2012)
Cell
, vol.149
, Issue.6
, pp. 1368-1380
-
-
Yu, M.1
Hon, G.C.2
Szulwach, K.E.3
Song, C.X.4
Zhang, L.5
Kim, A.6
Li, X.7
Dai, Q.8
Shen, Y.9
Park, B.10
-
22
-
-
84861221693
-
Quantitative Sequencing of 5-Methylcytosine and 5-Hydroxymethylcytosine at Single-Base Resolution
-
Booth MJ, Branco MR, Ficz G, Oxley D, Krueger F, Reik W, Balasubramanian S. Quantitative Sequencing of 5-Methylcytosine and 5-Hydroxymethylcytosine at Single-Base Resolution. Science. 2012;336(6083):934-37.
-
(2012)
Science.
, vol.336
, Issue.6083
, pp. 934-937
-
-
Booth, M.J.1
Branco, M.R.2
Ficz, G.3
Oxley, D.4
Krueger, F.5
Reik, W.6
Balasubramanian, S.7
-
23
-
-
80054759356
-
DNA methylation detection: bisulfite genomic sequencing analysis
-
Li Y, Tollefsbol TO. DNA methylation detection: bisulfite genomic sequencing analysis. Methods Mol Biol. 2011;791:11-21.
-
(2011)
Methods Mol Biol
, vol.791
, pp. 11-21
-
-
Li, Y.1
Tollefsbol, T.O.2
|