-
1
-
-
58549083738
-
Functional metagenomics reveals diverse β-lactamases in a remote Alaskan soil
-
Allen, H. K., Moe, L. A., Rodbumrer, J., Gaarder, A., and Handelsman, J. (2009). Functional metagenomics reveals diverse β-lactamases in a remote Alaskan soil. ISME J. 3, 243-251. doi: 10.1038/ismej.2008.86
-
(2009)
ISME J
, vol.3
, pp. 243-251
-
-
Allen, H.K.1
Moe, L.A.2
Rodbumrer, J.3
Gaarder, A.4
Handelsman, J.5
-
3
-
-
13744259814
-
Carbapenemase-producing Enterobacteriaceae, U.S. rivers
-
Aubron, C., Poirel, L., Ash, R. J., and Nordmann, P. (2005). Carbapenemase-producing Enterobacteriaceae, U.S. rivers. Emerg. Infect. Dis. 11, 260-264. doi: 10.3201/eid1102.030684
-
(2005)
Emerg. Infect. Dis
, vol.11
, pp. 260-264
-
-
Aubron, C.1
Poirel, L.2
Ash, R.J.3
Nordmann, P.4
-
4
-
-
70349324693
-
The structure of the dizinc subclass B2 metallo-β-lactamase CphA reveals that the second inhibitory zinc ion binds in the histidine site
-
Bebrone, C., Delbruck, H., Kupper, M. B., Schlomer, P., Willmann, C., Frere, J. M., et al. (2009). The structure of the dizinc subclass B2 metallo-β-lactamase CphA reveals that the second inhibitory zinc ion binds in the histidine site. Antimicrob. Agents Chemother. 53, 4464-4471. doi: 10.1128/AAC.00288-09
-
(2009)
Antimicrob. Agents Chemother
, vol.53
, pp. 4464-4471
-
-
Bebrone, C.1
Delbruck, H.2
Kupper, M.B.3
Schlomer, P.4
Willmann, C.5
Frere, J.M.6
-
5
-
-
0036719608
-
Genetic and biochemical characterization of CGB-1, an Ambler class B carbapenem-hydrolyzing β-lactamase from Chryseobacterium gleum
-
Bellais, S., Naas, T., and Nordmann, P. (2002). Genetic and biochemical characterization of CGB-1, an Ambler class B carbapenem-hydrolyzing β-lactamase from Chryseobacterium gleum. Antimicrob. Agents Chemother. 46, 2791-2796. doi: 10.1128/AAC.46.9.2791-2796.2002
-
(2002)
Antimicrob. Agents Chemother
, vol.46
, pp. 2791-2796
-
-
Bellais, S.1
Naas, T.2
Nordmann, P.3
-
7
-
-
33847377956
-
Metallo-β-lactamases as emerging resistance determinants in gram-negative pathogens: open issues
-
Cornaglia, G., Akova, M., Amicosante, G., Cantón, R., Cauda, R., Docquier, J. D., et al. (2007). Metallo-β-lactamases as emerging resistance determinants in gram-negative pathogens: open issues. Int. J. Antimicrob. Agents 29, 380-388. doi: 10.1016/j.ijantimicag.2006.10.008
-
(2007)
Int. J. Antimicrob. Agents
, vol.29
, pp. 380-388
-
-
Cornaglia, G.1
Akova, M.2
Amicosante, G.3
Cantón, R.4
Cauda, R.5
Docquier, J.D.6
-
8
-
-
79955453026
-
Metallo-β-lactamases: a last frontier for β-lactams?
-
Cornaglia, G., Giamarellou, H., and Rossolini, G. M. (2011). Metallo-β-lactamases: a last frontier for β-lactams? Lancet Infect Dis. 11, 381-393. doi: 10.1016/S1473-3099(11)70056-1
-
(2011)
Lancet Infect Dis
, vol.11
, pp. 381-393
-
-
Cornaglia, G.1
Giamarellou, H.2
Rossolini, G.M.3
-
9
-
-
79954529507
-
ProtTest 3, fast selection of best-fit models of protein evolution
-
Darriba, D., Taboada, G. L., Doallo, R., and Posada, D. (2011). ProtTest 3: fast selection of best-fit models of protein evolution. Bioinformatics 27, 1164-1165. doi: 10.1093/bioinformatics/btr088
-
(2011)
Bioinformatics
, vol.27
, pp. 1164-1165
-
-
Darriba, D.1
Taboada, G.L.2
Doallo, R.3
Posada, D.4
-
10
-
-
0036090426
-
CAU-1, a subclass B3 metallo-β-lactamase of low substrate affinity encoded by an ortholog present in the Caulobacter crescentus chromosome
-
Docquier, J. D., Pantanella, F., Giuliani, F., Thaller, M. C., Amicosante, G., Galleni, M., et al. (2002). CAU-1, a subclass B3 metallo-β-lactamase of low substrate affinity encoded by an ortholog present in the Caulobacter crescentus chromosome. Antimicrob. Agents Chemother. 46, 1823-1830. doi: 10.1128/AAC.46.6.1823-1830.2002
-
(2002)
Antimicrob. Agents Chemother
, vol.46
, pp. 1823-1830
-
-
Docquier, J.D.1
Pantanella, F.2
Giuliani, F.3
Thaller, M.C.4
Amicosante, G.5
Galleni, M.6
-
11
-
-
84897002429
-
Strategy for rapid detection of carbapenemase-producing Enterobacteriaceae
-
Dortet, L., Bréchard, L., Cuzon, G., Poirel, L., and Nordmann, P. (2014). Strategy for rapid detection of carbapenemase-producing Enterobacteriaceae. Antimicrob. Agents Chemother. 58, 2441-2445. doi: 10.1128/AAC.01239-13
-
(2014)
Antimicrob. Agents Chemother
, vol.58
, pp. 2441-2445
-
-
Dortet, L.1
Bréchard, L.2
Cuzon, G.3
Poirel, L.4
Nordmann, P.5
-
12
-
-
80051672898
-
Crystal structure of Serratia fonticola Sfh-I: activation of the nucleophile in mono-zinc metallo-β-lactamases
-
Fonseca, F., Bromley, E. H., Saavedra, M. J., Correia, A., and Spencer, J. (2011). Crystal structure of Serratia fonticola Sfh-I: activation of the nucleophile in mono-zinc metallo-β-lactamases. J. Mol. Biol. 411, 951-959. doi: 10.1016/j.jmb.2011.06.043
-
(2011)
J. Mol. Biol
, vol.411
, pp. 951-959
-
-
Fonseca, F.1
Bromley, E.H.2
Saavedra, M.J.3
Correia, A.4
Spencer, J.5
-
13
-
-
84901652050
-
Bacterial phylogeny structures soil resistomes across habitats
-
Forsberg, K. J., Patel, S., Gibson, M. K., Lauber, C. L., Knight, R., Fierer, N., et al. (2014). Bacterial phylogeny structures soil resistomes across habitats. Nature 509, 612-616. doi: 10.1038/nature13377
-
(2014)
Nature
, vol.509
, pp. 612-616
-
-
Forsberg, K.J.1
Patel, S.2
Gibson, M.K.3
Lauber, C.L.4
Knight, R.5
Fierer, N.6
-
14
-
-
84865531061
-
The shared antibiotic resistome of soil bacteria and human pathogens
-
Forsberg, K. J., Reyes, A., Wang, B., Selleck, E. M., Sommer, M. O., and Dantas, G. (2012). The shared antibiotic resistome of soil bacteria and human pathogens. Science 337, 1107-1111. doi: 10.1126/science.1220761
-
(2012)
Science
, vol.337
, pp. 1107-1111
-
-
Forsberg, K.J.1
Reyes, A.2
Wang, B.3
Selleck, E.M.4
Sommer, M.O.5
Dantas, G.6
-
15
-
-
0035119114
-
Standard numbering scheme for class B β-lactamases
-
Galleni, M., Lamotte-Brasseur, J., Rossolini, G. M., Spencer, J., Dideberg, O., Frere, J. M., et al. (2001). Standard numbering scheme for class B β-lactamases. Antimicrobials. Agents Chemother. 45, 660-663. doi: 10.1128/AAC.45.3.660-663.2001
-
(2001)
Antimicrobials. Agents Chemother
, vol.45
, pp. 660-663
-
-
Galleni, M.1
Lamotte-Brasseur, J.2
Rossolini, G.M.3
Spencer, J.4
Dideberg, O.5
Frere, J.M.6
-
16
-
-
0036136657
-
Nosocomial outbreak of carbapenem-resistant Pseudomonas aeruginosa with a new blaIMP allele, blaIMP-7
-
Gibb, A. P., Tribuddharat, C., Moore, R. A., Louie, T. J., Krulicki, W., Livermore, D. M., et al. (2002). Nosocomial outbreak of carbapenem-resistant Pseudomonas aeruginosa with a new blaIMP allele, blaIMP-7. Antimicrob. Agents Chemother. 46, 255-258. doi: 10.1128/AAC.46.1.255-258.2002
-
(2002)
Antimicrob. Agents Chemother
, vol.46
, pp. 255-258
-
-
Gibb, A.P.1
Tribuddharat, C.2
Moore, R.A.3
Louie, T.J.4
Krulicki, W.5
Livermore, D.M.6
-
17
-
-
84921632491
-
Improved annotation of antibiotic resistance determinants reveals microbial resistomes cluster by ecology
-
Gibson, M. K., Forsberg, K. J., and Dantas, G. (2015). Improved annotation of antibiotic resistance determinants reveals microbial resistomes cluster by ecology. ISME J. 9, 207-216. doi: 10.1038/ismej.2014.106
-
(2015)
ISME J
, vol.9
, pp. 207-216
-
-
Gibson, M.K.1
Forsberg, K.J.2
Dantas, G.3
-
18
-
-
73849113684
-
Novel Ambler class A carbapenem-hydrolyzing β-lactamase from a Pseudomonas fluorescens isolate from the Seine river, Paris, France
-
Girlich, D., Poirel, L., and Nordmann, P. (2010). Novel Ambler class A carbapenem-hydrolyzing β-lactamase from a Pseudomonas fluorescens isolate from the Seine river, Paris, France. Antimicrob. Agents Chemother. 54, 328-332. doi: 10.1128/AAC.00961-09
-
(2010)
Antimicrob. Agents Chemother
, vol.54
, pp. 328-332
-
-
Girlich, D.1
Poirel, L.2
Nordmann, P.3
-
19
-
-
84957886265
-
The soil microbiota harbors a diversity of carbapenem-hydrolyzing β-lactamases of potential clinical relevance
-
Gudeta, D. D., Bortolaia, V., Amos, G., Wellington, E. M., Brandt, K. K., Poirel, L., et al. (2016a). The soil microbiota harbors a diversity of carbapenem-hydrolyzing β-lactamases of potential clinical relevance. Antimicrob. Agents Chemother. 60, 151-160. doi: 10.1128/AAC.01424-15
-
(2016)
Antimicrob. Agents Chemother
, vol.60
, pp. 151-160
-
-
Gudeta, D.D.1
Bortolaia, V.2
Amos, G.3
Wellington, E.M.4
Brandt, K.K.5
Poirel, L.6
-
20
-
-
84973279157
-
Chromobacterium spp. harbour Ambler class A β-lactamases showing high identity with KPC
-
Gudeta, D. D., Bortolaia, V., Jayol, A., Poirel, L., Nordmann, P., and Guardabassi, L. (2016b). Chromobacterium spp. harbour Ambler class A β-lactamases showing high identity with KPC. J. Antimicrob.Chemother. 71, 1493-1496. doi: 10.1093/jac/dkw020
-
(2016)
J. Antimicrob.Chemother
, vol.71
, pp. 1493-1496
-
-
Gudeta, D.D.1
Bortolaia, V.2
Jayol, A.3
Poirel, L.4
Nordmann, P.5
Guardabassi, L.6
-
21
-
-
2542499764
-
Molecular characterization of a carbapenem-hydrolyzing class A β-lactamase, SFC-1, from Serratia fonticola UTAD54
-
Henriques, I., Moura, A., Alves, A., Saavedra, M. J., and Correia, A. (2004). Molecular characterization of a carbapenem-hydrolyzing class A β-lactamase, SFC-1, from Serratia fonticola UTAD54. Antimicrob. Agents Chemother. 48, 2321-2324. doi: 10.1128/AAC.48.6.2321-2324.2004
-
(2004)
Antimicrob. Agents Chemother
, vol.48
, pp. 2321-2324
-
-
Henriques, I.1
Moura, A.2
Alves, A.3
Saavedra, M.J.4
Correia, A.5
-
22
-
-
0032587031
-
Cloning and characterization of blaVIM, a new integron-borne metallo-β-lactamase gene from a Pseudomonas aeruginosa clinical isolate
-
Lauretti, L., Riccio, M. L., Mazzariol, A., Cornaglia, G., Amicosante, G., Fontana, R., et al. (1999). Cloning and characterization of blaVIM, a new integron-borne metallo-β-lactamase gene from a Pseudomonas aeruginosa clinical isolate. Antimicrob. Agents Chemother. 43, 1584-1590.
-
(1999)
Antimicrob. Agents Chemother
, vol.43
, pp. 1584-1590
-
-
Lauretti, L.1
Riccio, M.L.2
Mazzariol, A.3
Cornaglia, G.4
Amicosante, G.5
Fontana, R.6
-
23
-
-
0032819386
-
Role of permeability in the activities of β-lactams against gram-negative bacteria which produce a group 3 β-lactamase
-
Matsumura, N., Minami, S., Watanabe, Y., Iyobe, S., and Mitsuhashi, S. (1999). Role of permeability in the activities of β-lactams against gram-negative bacteria which produce a group 3 β-lactamase. Antimicrob. Agents Chemother. 43, 2084-2086.
-
(1999)
Antimicrob. Agents Chemother
, vol.43
, pp. 2084-2086
-
-
Matsumura, N.1
Minami, S.2
Watanabe, Y.3
Iyobe, S.4
Mitsuhashi, S.5
-
24
-
-
0037323917
-
Molecular and biochemical characterization of a carbapenem-hydrolysing β-lactamase from Flavobacterium johnsoniae
-
Naas, T., Bellais, S., and Nordmann, P. (2003). Molecular and biochemical characterization of a carbapenem-hydrolysing β-lactamase from Flavobacterium johnsoniae. J. Antimicrob. Chemother. 51, 267-273. doi: 10.1093/jac/dkg069
-
(2003)
J. Antimicrob. Chemother
, vol.51
, pp. 267-273
-
-
Naas, T.1
Bellais, S.2
Nordmann, P.3
-
25
-
-
79251560623
-
RAIphy: phylogenetic classification of metagenomics samples using iterative refinement of relative abundance index profiles
-
Nalbantoglu, O. U., Way, S. F., Hinrichs, S. H., and Sayood, K. (2011). RAIphy: phylogenetic classification of metagenomics samples using iterative refinement of relative abundance index profiles. BMC Bioinform. 12:41 doi: 10.1186/1471-2105-12-41
-
(2011)
BMC Bioinform. 12:41
-
-
Nalbantoglu, O.U.1
Way, S.F.2
Hinrichs, S.H.3
Sayood, K.4
-
26
-
-
84926344267
-
The soil resistome: a critical review on antibiotic resistance origins, ecology and dissemination potential in telluric bacteria
-
Nesme, J., and Simonet, P. (2015). The soil resistome: a critical review on antibiotic resistance origins, ecology and dissemination potential in telluric bacteria. Environ. Microbiol. 17, 913-930. doi: 10.1111/1462-2920.12631
-
(2015)
Environ. Microbiol
, vol.17
, pp. 913-930
-
-
Nesme, J.1
Simonet, P.2
-
27
-
-
84860516573
-
Carbapenem resistance in Enterobacteriaceae: here is the storm! Trends Mol
-
Nordmann, P., Dortet, L., and Poirel, L. (2012). Carbapenem resistance in Enterobacteriaceae: here is the storm! Trends Mol. Med. 18, 263-272. doi: 10.1016/j.molmed.2012.03.003
-
(2012)
Med
, vol.18
, pp. 263-272
-
-
Nordmann, P.1
Dortet, L.2
Poirel, L.3
-
28
-
-
84930486688
-
Global spread of carbapenemase-producing Enterobacteriaceae
-
Nordmann, P., Naas, T., and Poirel, L. (2011). Global spread of carbapenemase-producing Enterobacteriaceae. Emerg. Infect Dis. 17, 1791-1798. doi: 10.3201/eid1710.110655
-
(2011)
Emerg. Infect Dis
, vol.17
, pp. 1791-1798
-
-
Nordmann, P.1
Naas, T.2
Poirel, L.3
-
29
-
-
0347992026
-
Chromosome-encoded Ambler class D β-lactamase of Shewanella oneidensis as a progenitor of carbapenem-hydrolyzing oxacillinase
-
Poirel, L., Heritier, C., and Nordmann, P. (2004). Chromosome-encoded Ambler class D β-lactamase of Shewanella oneidensis as a progenitor of carbapenem-hydrolyzing oxacillinase. Antimicrob. Agents Chemother. 48, 348-351. doi: 10.1128/AAC.48.1.348-351.2004
-
(2004)
Antimicrob. Agents Chemother
, vol.48
, pp. 348-351
-
-
Poirel, L.1
Heritier, C.2
Nordmann, P.3
-
30
-
-
0034023159
-
Characterization of VIM-2, a carbapenem-hydrolyzing metallo-β-lactamase and its plasmid-and integron-borne gene from a Pseudomonas aeruginosa clinical isolate in France
-
Poirel, L., Naas, T., Nicolas, D., Collet, L., Bellais, S., Cavallo, J. D., et al. (2000). Characterization of VIM-2, a carbapenem-hydrolyzing metallo-β-lactamase and its plasmid-and integron-borne gene from a Pseudomonas aeruginosa clinical isolate in France. Antimicrob. Agents Chemother. 44, 891-897. doi: 10.1128/AAC.44.4.891-897.2000
-
(2000)
Antimicrob. Agents Chemother
, vol.44
, pp. 891-897
-
-
Poirel, L.1
Naas, T.2
Nicolas, D.3
Collet, L.4
Bellais, S.5
Cavallo, J.D.6
-
31
-
-
0035115181
-
Metallo-β-lactamase producers in environmental microbiota: new molecular class B enzyme in Janthinobacterium lividum
-
Rossolini, G. M., Condemi, M. A., Pantanella, F., Docquier, J. D., Amicosante, G., and Thaller, M. C. (2001). Metallo-β-lactamase producers in environmental microbiota: new molecular class B enzyme in Janthinobacterium lividum. Antimicrob. Agents Chemother. 45, 837-844. doi: 10.1128/AAC.45.3.837-844.2001
-
(2001)
Antimicrob. Agents Chemother
, vol.45
, pp. 837-844
-
-
Rossolini, G.M.1
Condemi, M.A.2
Pantanella, F.3
Docquier, J.D.4
Amicosante, G.5
Thaller, M.C.6
-
32
-
-
0038311982
-
Sfh-I, a subclass B2 metallo-β-lactamase from a Serratia fonticola environmental isolate
-
Saavedra, M. J., Peixe, L., Sousa, J. C., Henriques, I., Alves, A., and Correia, A. (2003). Sfh-I, a subclass B2 metallo-β-lactamase from a Serratia fonticola environmental isolate. Antimicrob. Agents Chemother. 47, 2330-2333. doi: 10.1128/AAC.47.7.2330-2333.2003
-
(2003)
Antimicrob. Agents Chemother
, vol.47
, pp. 2330-2333
-
-
Saavedra, M.J.1
Peixe, L.2
Sousa, J.C.3
Henriques, I.4
Alves, A.5
Correia, A.6
-
33
-
-
84860434973
-
raxmlGUI: a graphical front-end for RAxML
-
Silvestro, D., and Michalak, I. (2012). raxmlGUI: a graphical front-end for RAxML. Organ. Divers. Evol. 12, 335-337. doi: 10.1007/s13127-011-0056-0
-
(2012)
Organ. Divers. Evol
, vol.12
, pp. 335-337
-
-
Silvestro, D.1
Michalak, I.2
-
34
-
-
69549086653
-
Functional characterization of the antibiotic resistance reservoir in the human microflora
-
Sommer, M. O., Dantas, G., and Church, G. M. (2009). Functional characterization of the antibiotic resistance reservoir in the human microflora. Science 325, 1128-1131. doi: 10.1126/science.1176950
-
(2009)
Science
, vol.325
, pp. 1128-1131
-
-
Sommer, M.O.1
Dantas, G.2
Church, G.M.3
-
35
-
-
33744464764
-
Postgenomic scan of metallo-β-lactamase homologues in Rhizobacteria: identification and characterization of BJP-1, a subclass B3 ortholog from Bradyrhizobium japonicum
-
Stoczko, M., Frère, J.-M., Rossolini, G. M., and Docquier, J.-D. (2006). Postgenomic scan of metallo-β-lactamase homologues in Rhizobacteria: identification and characterization of BJP-1, a subclass B3 ortholog from Bradyrhizobium japonicum. Antimicrob. Agents Chemother. 50, 1973-1981. doi: 10.1128/AAC.01551-05
-
(2006)
Antimicrob. Agents Chemother
, vol.50
, pp. 1973-1981
-
-
Stoczko, M.1
Frère, J.-M.2
Rossolini, G.M.3
Docquier, J.-D.4
-
36
-
-
46249083011
-
Functional diversity among metallo-β-lactamases: characterization of the CAR-1 enzyme of Erwinia carotovora
-
Stoczko, M., Frère, J.-M., Rossolini, G. M., and Docquier, J.-D. (2008). Functional diversity among metallo-β-lactamases: characterization of the CAR-1 enzyme of Erwinia carotovora. Antimicrob. Agents Chemother. 52, 2473-2479. doi: 10.1128/AAC.01062-07
-
(2008)
Antimicrob. Agents Chemother
, vol.52
, pp. 2473-2479
-
-
Stoczko, M.1
Frère, J.-M.2
Rossolini, G.M.3
Docquier, J.-D.4
-
37
-
-
84881012253
-
Origins of the β-lactam rings in natural products
-
Tahlan, K., and Jensen, S. E. (2013). Origins of the β-lactam rings in natural products. J. Antibiot. 66, 401-410. doi: 10.1038/ja.2013.24
-
(2013)
J. Antibiot
, vol.66
, pp. 401-410
-
-
Tahlan, K.1
Jensen, S.E.2
-
38
-
-
80054685376
-
SMB-1, a novel subclass B3 metallo-β-lactamase, associated with ISCR1 and a class 1 integron, from a carbapenem-resistant Serratia marcescens clinical isolate
-
Wachino, J., Yoshida, H., Yamane, K., Suzuki, S., Matsui, M., Yamagishi, T., et al. (2011). SMB-1, a novel subclass B3 metallo-β-lactamase, associated with ISCR1 and a class 1 integron, from a carbapenem-resistant Serratia marcescens clinical isolate. Antimicrob. Agents Chemother. 55, 5143-5149. doi: 10.1128/AAC.05045-11
-
(2011)
Antimicrob. Agents Chemother
, vol.55
, pp. 5143-5149
-
-
Wachino, J.1
Yoshida, H.2
Yamane, K.3
Suzuki, S.4
Matsui, M.5
Yamagishi, T.6
-
39
-
-
17444363393
-
Metallo-β-lactamases: the quiet before the storm?
-
Walsh, T. R., Toleman, M. A., Poirel, L., and Nordmann, P. (2005). Metallo-β-lactamases: the quiet before the storm? Clin. Microbiol. Rev. 18, 306-325. doi: 10.1128/CMR.18.2.306-325.2005
-
(2005)
Clin. Microbiol. Rev
, vol.18
, pp. 306-325
-
-
Walsh, T.R.1
Toleman, M.A.2
Poirel, L.3
Nordmann, P.4
-
40
-
-
84869237356
-
AIM-1, and its unique genetic context in Pseudomonas aeruginosa from Australia
-
AIM-1, and its unique genetic context in Pseudomonas aeruginosa from Australia. Antimicrob. Agents Chemother. 56, 6154-6159. doi: 10.1128/AAC.05654-11
-
(2012)
Antimicrob. Agents Chemother
, vol.56
, pp. 6154-6159
-
-
Yong, D.1
Toleman, M.A.2
Bell, J.3
Ritchie, B.4
Pratt, R.5
Ryley, H.6
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