Draft genome sequence of Kluyveromyces marxianus strain DMB1, isolated from sugarcane bagasse hydrolysate

Genome Announcements

Volumn 2, Issue 4, 2014, Pages

  Suzuki, Toshihiro ^a   Hoshino, Tamotsu ^a,b   Matsushika, Akinori ^a  

^a NATIONAL INSTITUTE OF ADVANCED INDUSTRIAL SCIENCE AND TECHNOLOGY AIST   (Japan)

^b HIROSHIMA UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 85003587558     PISSN: None     EISSN: 21698287     Source Type: Journal    
DOI: 10.1128/genomeA.00733-14     Document Type: Article

References (10)

1. Nonklang S, Abdel-Banat BMA, Cha-Aim K, Moonjai N, Hoshida H, Limtong S, Yamada M, Akada R. 2008. High-temperature ethanol fermentation and traNsformation with linear DNA in the thermotolerant yeast Kluyveromyces marxianus DMKU3-1042. Appl. Environ. Microbiol. 74:7514-7521. http://dx.doi.org/10.1128/AEM.01854-08.
2. Banat IM, Marchant R. 1995. Characterization and potential industrial applications of five novel, thermotolerant, fermentative, yeast strains. World J. Microbiol. Biotechnol. 11:304-306. http://dx.doi.org/10.1007/BF00367104.
3. Rodrussamee N, Lertwattanasakul N, Hirata K, Suprayogi, Limtong S, Kosaka T, Yamada M. 2011. Growth and ethanol fermentation ability on hexose and pentose sugars and glucose effect under various conditions in thermotolerant yeast Kluyveromyces marxianus. Appl. Microbiol. Biotechnol. 90:1573-1586. http://dx.doi.org/10.1007/s00253-011-3218-2.
4. Camargo D, Gomes SD, Sene L. 2014. Ethanol production from sunflower meal biomass by simultaneous saccharification and fermentation (SSF) with Kluyveromyces marxianus ATCC 36907. Bioprocess Biosyst. Eng. http://dx.doi.org/10.1007/s00449-014-1201-x.
5. Goshima T, Tsuji M, Inoue H, Yano S, Hoshino T, Matsushika A. 2013. Bioethanol production from Lignocellulosic biomass by a novel Kluyveromyces marxianus strain. Biosci. Biotechnol. Biochem. 77:1505-1510. http://dx.doi.org/10.1271/bbb.130173.
6. Chin C-S, Alexander DH, Marks P, Klammer AA, Drake J, Heiner C, Clum A, Copeland A, Huddleston J, Eichler EE, Turner SW, Korlach J. 2013 Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data. Nat. Methods 10:563-569. http://dx.doi.org/10.1038/nmeth.2474.
7. Holt C, Yandell M. 2011. MAKER2: an annotation pipeline and genomedatabase management tool for second-generation genome projects. BMC Bioinformatics 12:491. http://dx.doi.org/10.1186/1471-2105-12-491.
8. Stanke M, Diekhans M, Baertsch R, Haussler D. 2008. Using native and syntenically mapped cDNA alignments to improve de novo gene finding. Bioinformatics 24:637-644. http://dx.doi.org/10.1093/bioinformatics/btn013.
9. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-410. http://dx.doi.org/10.1016/S0022-2836(05)80360-2.
10. Lowe TM, Eddy SR. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25: 0955-0964. http://dx.doi.org/10.1093/nar/25.5.0955.