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Volumn 14, Issue 1, 2017, Pages 58-72

Two distinct extracellular RNA signatures released by a single cell type identified by microarray and next-generation sequencing

Author keywords

Exosomes; extracellular RNA; extracellular vesicles; microarray; next generation sequencing; proteomics; RNA; transcriptomics

Indexed keywords

COMPLEMENTARY RNA; EXTRACELLULAR RNA; HIGH DENSITY EXTRACELLULAR RNA; LONG UNTRANSLATED RNA; LOW DENSITY EXTRACELLULAR RNA; MESSENGER RNA; MICRORNA; MITOCHONDRIAL RNA; PIWI INTERACTING RNA; PROTEOME; RIBOSOME RNA; RNA; RNA 18S; RNA 28S; RNA BINDING PROTEIN; SMALL NUCLEAR RNA; SMALL NUCLEOLAR RNA; TRANSFER RNA; UNCLASSIFIED DRUG; UNTRANSLATED RNA;

EID: 84997765033     PISSN: 15476286     EISSN: 15558584     Source Type: Journal    
DOI: 10.1080/15476286.2016.1249092     Document Type: Article
Times cited : (108)

References (63)
  • 1
    • 0013964845 scopus 로고
    • Deoxybonucleic acid (DNA) and antibodies to DNA in the serum of patients with systemic lupus erythematosus
    • 4959277
    • Tan EM, Schur PH, Carr RI, Kunkel HG. Deoxybonucleic acid (DNA) and antibodies to DNA in the serum of patients with systemic lupus erythematosus. J Clin Invest 1966; 45:1732-40; PMID:4959277; http://dx.doi.org/10.1172/JCI105479
    • (1966) J Clin Invest , vol.45 , pp. 1732-1740
    • Tan, E.M.1    Schur, P.H.2    Carr, R.I.3    Kunkel, H.G.4
  • 3
    • 0015350817 scopus 로고
    • Nucleic acid concentrations in normal human plasma
    • 5026765
    • Kamm RC, Smith AG. Nucleic acid concentrations in normal human plasma. Clin Chem 1972; 18:519-22; PMID:5026765
    • (1972) Clin Chem , vol.18 , pp. 519-522
    • Kamm, R.C.1    Smith, A.G.2
  • 4
    • 81055138737 scopus 로고    scopus 로고
    • Recovering circulating extracellular or cell-free RNA from bodily fluids
    • 21514265
    • Tzimagiorgis G, Michailidou EZ, Kritis A, Markopoulos AK, Kouidou S. Recovering circulating extracellular or cell-free RNA from bodily fluids. Cancer Epidemiol 2011; 35:580-9; PMID:21514265; http://dx.doi.org/10.1016/j.canep.2011.02.016
    • (2011) Cancer Epidemiol , vol.35 , pp. 580-589
    • Tzimagiorgis, G.1    Michailidou, E.Z.2    Kritis, A.3    Markopoulos, A.K.4    Kouidou, S.5
  • 5
    • 84856695673 scopus 로고    scopus 로고
    • Circulating microRNAs: novel biomarkers and extracellular communicators in cardiovascular disease?
    • 22302755
    • Creemers EE, Tijsen AJ, Pinto YM. Circulating microRNAs:novel biomarkers and extracellular communicators in cardiovascular disease? Circ Res 2012; 110:483-95; PMID:22302755; http://dx.doi.org/10.1161/CIRCRESAHA.111.247452
    • (2012) Circ Res , vol.110 , pp. 483-495
    • Creemers, E.E.1    Tijsen, A.J.2    Pinto, Y.M.3
  • 6
    • 84863907845 scopus 로고    scopus 로고
    • Extracellular nucleic acids in maternal circulation as potential biomarkers for placental insufficiency
    • 22364204
    • Hromadnikova I. Extracellular nucleic acids in maternal circulation as potential biomarkers for placental insufficiency. DNA Cell Biol 2012; 31:1221-32; PMID:22364204; http://dx.doi.org/10.1089/dna.2011.1530
    • (2012) DNA Cell Biol , vol.31 , pp. 1221-1232
    • Hromadnikova, I.1
  • 7
    • 69149086135 scopus 로고    scopus 로고
    • The role of extracellular DNA in autoimmunity in SLE
    • 19703007
    • Su KY, Pisetsky DS. The role of extracellular DNA in autoimmunity in SLE. Scand J Immunol 2009; 70:175-83; PMID:19703007; http://dx.doi.org/10.1111/j.1365-3083.2009.02300.x
    • (2009) Scand J Immunol , vol.70 , pp. 175-183
    • Su, K.Y.1    Pisetsky, D.S.2
  • 8
    • 33847129200 scopus 로고    scopus 로고
    • Circulating (cell-free) nucleic acids–a promising, non-invasive tool for early detection of several human diseases
    • 17289032
    • Swarup V, Rajeswari MR. Circulating (cell-free) nucleic acids–a promising, non-invasive tool for early detection of several human diseases. FEBS Lett 2007; 581:795-9; PMID:17289032; http://dx.doi.org/10.1016/j.febslet.2007.01.051
    • (2007) FEBS Lett , vol.581 , pp. 795-799
    • Swarup, V.1    Rajeswari, M.R.2
  • 10
    • 80052381608 scopus 로고    scopus 로고
    • Characterization of extracellular circulating microRNA
    • 21609964
    • Turchinovich A, Weiz L, Langheinz A, Burwinkel B. Characterization of extracellular circulating microRNA. Nucleic Acids Res 2011; 39:7223-33; PMID:21609964; http://dx.doi.org/10.1093/nar/gkr254
    • (2011) Nucleic Acids Res , vol.39 , pp. 7223-7233
    • Turchinovich, A.1    Weiz, L.2    Langheinz, A.3    Burwinkel, B.4
  • 11
    • 79953301730 scopus 로고    scopus 로고
    • MicroRNAs are transported in plasma and delivered to recipient cells by high-density lipoproteins
    • 21423178
    • Vickers KC, Palmisano BT, Shoucri BM, Shamburek RD, Remaley AT. MicroRNAs are transported in plasma and delivered to recipient cells by high-density lipoproteins. Nat Cell Biol 2011; 13:423-33; PMID:21423178; http://dx.doi.org/10.1038/ncb2210
    • (2011) Nat Cell Biol , vol.13 , pp. 423-433
    • Vickers, K.C.1    Palmisano, B.T.2    Shoucri, B.M.3    Shamburek, R.D.4    Remaley, A.T.5
  • 12
    • 85026337731 scopus 로고    scopus 로고
    • Distinct RNA profiles in subpopulations of extracellular vesicles: apoptotic bodies, microvesicles and exosomes
    • 24223256
    • Crescitelli R, Lässer C, Szabo TG, Kittel A, Eldh M, Dianzani I, Buzás EI, Lötvall J. Distinct RNA profiles in subpopulations of extracellular vesicles:apoptotic bodies, microvesicles and exosomes. J Extracell Vesicles 2013; 2; PMID:24223256; http://dx.doi.org/10.3402/jev.v2i0.20677
    • (2013) J Extracell Vesicles , vol.2
    • Crescitelli, R.1    Lässer, C.2    Szabo, T.G.3    Kittel, A.4    Eldh, M.5    Dianzani, I.6    Buzás, E.I.7    Lötvall, J.8
  • 13
    • 84862117665 scopus 로고    scopus 로고
    • Recent advances on the role of tumor exosomes in immunosuppression and disease progression
    • 22369922
    • Filipazzi P, Burdek M, Villa A, Rivoltini L, Huber V. Recent advances on the role of tumor exosomes in immunosuppression and disease progression. Seminars Cancer Biol 2012; 22:342-9; PMID:22369922; http://dx.doi.org/10.1016/j.semcancer.2012.02.005
    • (2012) Seminars Cancer Biol , vol.22 , pp. 342-349
    • Filipazzi, P.1    Burdek, M.2    Villa, A.3    Rivoltini, L.4    Huber, V.5
  • 14
    • 80051931141 scopus 로고    scopus 로고
    • Induction of a tumour-specific CTL response by exosomes isolated from heat-treated malignant ascites of gastric cancer patients
    • 21846196
    • Zhong H, Yang Y, Ma S, Xiu F, Cai Z, Zhao H, Du L. Induction of a tumour-specific CTL response by exosomes isolated from heat-treated malignant ascites of gastric cancer patients. Int J Hyperthermia 2011; 27:604-11; PMID:21846196; http://dx.doi.org/10.3109/02656736.2011.564598
    • (2011) Int J Hyperthermia , vol.27 , pp. 604-611
    • Zhong, H.1    Yang, Y.2    Ma, S.3    Xiu, F.4    Cai, Z.5    Zhao, H.6    Du, L.7
  • 16
    • 78650265541 scopus 로고    scopus 로고
    • Exosomes and other microvesicles in infection biology: organelles with unanticipated phenotypes
    • 21040357
    • Silverman JM, Reiner NE. Exosomes and other microvesicles in infection biology:organelles with unanticipated phenotypes. Cell Microbiol 2011; 13:1-9; PMID:21040357; http://dx.doi.org/10.1111/j.1462-5822.2010.01537.x
    • (2011) Cell Microbiol , vol.13 , pp. 1-9
    • Silverman, J.M.1    Reiner, N.E.2
  • 17
    • 39749162770 scopus 로고    scopus 로고
    • The role of exosomes in the processing of proteins associated with neurodegenerative diseases
    • 18064447
    • Vella LJ, Sharples RA, Nisbet RM, Cappai R, Hill AF. The role of exosomes in the processing of proteins associated with neurodegenerative diseases. Euro Biophys J 2008; 37:323-32; PMID:18064447; http://dx.doi.org/10.1007/s00249-007-0246-z
    • (2008) Euro Biophys J , vol.37 , pp. 323-332
    • Vella, L.J.1    Sharples, R.A.2    Nisbet, R.M.3    Cappai, R.4    Hill, A.F.5
  • 18
    • 79953858598 scopus 로고    scopus 로고
    • Delivery of siRNA to the mouse brain by systemic injection of targeted exosomes
    • 21423189
    • Alvarez-Erviti L, Seow Y, Yin H, Betts C, Lakhal S, Wood MJ. Delivery of siRNA to the mouse brain by systemic injection of targeted exosomes. Nat Biotechnol 2011; 29:341-5; PMID:21423189; http://dx.doi.org/10.1038/nbt.1807
    • (2011) Nat Biotechnol , vol.29 , pp. 341-345
    • Alvarez-Erviti, L.1    Seow, Y.2    Yin, H.3    Betts, C.4    Lakhal, S.5    Wood, M.J.6
  • 19
    • 84861419046 scopus 로고    scopus 로고
    • Exosomal RNA as biomarkers and the therapeutic potential of exosome vectors
    • Can't
    • Lässer C. Exosomal RNA as biomarkers and the therapeutic potential of exosome vectors. Expert Opin Biol Ther 2012; 12 Suppl 1:S189-97; PMID:Can't; http://dx.doi.org/10.1517/14712598.2012.680018
    • (2012) Expert Opin Biol Ther , vol.12 , pp. S189-S197
    • Lässer, C.1
  • 21
    • 84867546396 scopus 로고    scopus 로고
    • Deep sequencing of RNA from immune cell-derived vesicles uncovers the selective incorporation of small non-coding RNA biotypes with potential regulatory functions
    • 22821563
    • Nolte-'t Hoen EN, Buermans HP, Waasdorp M, Stoorvogel W, Wauben MH, t Hoen PA. Deep sequencing of RNA from immune cell-derived vesicles uncovers the selective incorporation of small non-coding RNA biotypes with potential regulatory functions. Nucleic Acids Res 2012; 40:9272-85; PMID:22821563; http://dx.doi.org/10.1093/nar/gks658
    • (2012) Nucleic Acids Res , vol.40 , pp. 9272-9285
    • Nolte-'t Hoen, E.N.1    Buermans, H.P.2    Waasdorp, M.3    Stoorvogel, W.4    Wauben, M.H.5    t Hoen, P.A.6
  • 22
    • 84944445453 scopus 로고    scopus 로고
    • Small RNA deep sequencing discriminates subsets of extracellular vesicles released by melanoma cells - Evidence of unique microRNA cargos
    • 26176991
    • Lunavat TR, Cheng L, Kim DK, Bhadury J, Jang SC, Lasser C, Sharples RA, Lopez MD, Nilsson J, Gho YS, et al. Small RNA deep sequencing discriminates subsets of extracellular vesicles released by melanoma cells - Evidence of unique microRNA cargos. RNA Biol 2015; 12:810-23; PMID:26176991; http://dx.doi.org/10.1080/15476286.2015.1056975
    • (2015) RNA Biol , vol.12 , pp. 810-823
    • Lunavat, T.R.1    Cheng, L.2    Kim, D.K.3    Bhadury, J.4    Jang, S.C.5    Lasser, C.6    Sharples, R.A.7    Lopez, M.D.8    Nilsson, J.9    Gho, Y.S.10
  • 24
    • 78149409316 scopus 로고    scopus 로고
    • Export of microRNAs and microRNA-protective protein by mammalian cells
    • 20615901
    • Wang K, Zhang S, Weber J, Baxter D, Galas DJ. Export of microRNAs and microRNA-protective protein by mammalian cells. Nucleic Acids Res 2010; 38:7248-59; PMID:20615901; http://dx.doi.org/10.1093/nar/gkq601
    • (2010) Nucleic Acids Res , vol.38 , pp. 7248-7259
    • Wang, K.1    Zhang, S.2    Weber, J.3    Baxter, D.4    Galas, D.J.5
  • 27
    • 77956404647 scopus 로고    scopus 로고
    • Exosomes: extracellular organelles important in intercellular communication
    • 20601276
    • Mathivanan S, Ji H, Simpson RJ. Exosomes:extracellular organelles important in intercellular communication. J Proteomics 2010; 73:1907-20; PMID:20601276; http://dx.doi.org/10.1016/j.jprot.2010.06.006
    • (2010) J Proteomics , vol.73 , pp. 1907-1920
    • Mathivanan, S.1    Ji, H.2    Simpson, R.J.3
  • 28
    • 34249302620 scopus 로고    scopus 로고
    • Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells
    • 17486113
    • Valadi H, Ekstrom K, Bossios A, Sjostrand M, Lee JJ, Lotvall JO. Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells. Nat Cell Biol 2007; 9:654-9; PMID:17486113; http://dx.doi.org/10.1038/ncb1596
    • (2007) Nat Cell Biol , vol.9 , pp. 654-659
    • Valadi, H.1    Ekstrom, K.2    Bossios, A.3    Sjostrand, M.4    Lee, J.J.5    Lotvall, J.O.6
  • 29
    • 78650722735 scopus 로고    scopus 로고
    • Exosomes communicate protective messages during oxidative stress; possible role of exosomal shuttle RNA
    • 21179422
    • Eldh M, Ekstrom K, Valadi H, Sjostrand M, Olsson B, Jernas M, Lotvall J. Exosomes communicate protective messages during oxidative stress; possible role of exosomal shuttle RNA. PLoS One 2010; 5:e15353; PMID:21179422; http://dx.doi.org/10.1371/journal.pone.0015353
    • (2010) PLoS One , vol.5 , pp. e15353
    • Eldh, M.1    Ekstrom, K.2    Valadi, H.3    Sjostrand, M.4    Olsson, B.5    Jernas, M.6    Lotvall, J.7
  • 30
    • 71549122588 scopus 로고    scopus 로고
    • Colorectal cancer cell-derived microvesicles are enriched in cell cycle-related mRNAs that promote proliferation of endothelial cells
    • 19930720
    • Hong BS, Cho JH, Kim H, Choi EJ, Rho S, Kim J, Kim JH, Choi DS, Kim YK, Hwang D, et al. Colorectal cancer cell-derived microvesicles are enriched in cell cycle-related mRNAs that promote proliferation of endothelial cells. BMC Genomics 2009; 10:556; PMID:19930720; http://dx.doi.org/10.1186/1471-2164-10-556
    • (2009) BMC Genomics , vol.10 , pp. 556
    • Hong, B.S.1    Cho, J.H.2    Kim, H.3    Choi, E.J.4    Rho, S.5    Kim, J.6    Kim, J.H.7    Choi, D.S.8    Kim, Y.K.9    Hwang, D.10
  • 33
    • 79958048581 scopus 로고    scopus 로고
    • Body fluid derived exosomes as a novel template for clinical diagnostics
    • 21651777
    • Keller S, Ridinger J, Rupp AK, Janssen JW, Altevogt P. Body fluid derived exosomes as a novel template for clinical diagnostics. J Transl Med 2011; 9:86; PMID:21651777; http://dx.doi.org/10.1186/1479-5876-9-86
    • (2011) J Transl Med , vol.9 , pp. 86
    • Keller, S.1    Ridinger, J.2    Rupp, A.K.3    Janssen, J.W.4    Altevogt, P.5
  • 34
    • 77952920881 scopus 로고    scopus 로고
    • Secretory mechanisms and intercellular transfer of microRNAs in living cells
    • 20353945
    • Kosaka N, Iguchi H, Yoshioka Y, Takeshita F, Matsuki Y, Ochiya T. Secretory mechanisms and intercellular transfer of microRNAs in living cells. J Biol Chem 2010; 285:17442-52; PMID:20353945; http://dx.doi.org/10.1074/jbc.M110.107821
    • (2010) J Biol Chem , vol.285 , pp. 17442-17452
    • Kosaka, N.1    Iguchi, H.2    Yoshioka, Y.3    Takeshita, F.4    Matsuki, Y.5    Ochiya, T.6
  • 35
    • 77649101462 scopus 로고    scopus 로고
    • Nanostructural and transcriptomic analyses of human saliva derived exosomes
    • 20052414
    • Palanisamy V, Sharma S, Deshpande A, Zhou H, Gimzewski J, Wong DT. Nanostructural and transcriptomic analyses of human saliva derived exosomes. PLoS One 2010; 5:e8577; PMID:20052414; http://dx.doi.org/10.1371/journal.pone.0008577
    • (2010) PLoS One , vol.5 , pp. e8577
    • Palanisamy, V.1    Sharma, S.2    Deshpande, A.3    Zhou, H.4    Gimzewski, J.5    Wong, D.T.6
  • 36
    • 80053309537 scopus 로고    scopus 로고
    • Intercellular nanovesicle-mediated microRNA transfer: a mechanism of environmental modulation of hepatocellular cancer cell growth
    • 21721029
    • Kogure T, Lin WL, Yan IK, Braconi C, Patel T. Intercellular nanovesicle-mediated microRNA transfer:a mechanism of environmental modulation of hepatocellular cancer cell growth. Hepatology 2011; 54:1237-48; PMID:21721029; http://dx.doi.org/10.1002/hep.24504
    • (2011) Hepatology , vol.54 , pp. 1237-1248
    • Kogure, T.1    Lin, W.L.2    Yan, I.K.3    Braconi, C.4    Patel, T.5
  • 37
    • 77954244728 scopus 로고    scopus 로고
    • Nucleic acids within urinary exosomes/microvesicles are potential biomarkers for renal disease
    • 20428099
    • Miranda KC, Bond DT, McKee M, Skog J, Paunescu TG, Da Silva N, Brown D, Russo LM. Nucleic acids within urinary exosomes/microvesicles are potential biomarkers for renal disease. Kidney Int 2010; 78:191-9; PMID:20428099; http://dx.doi.org/10.1038/ki.2010.106
    • (2010) Kidney Int , vol.78 , pp. 191-199
    • Miranda, K.C.1    Bond, D.T.2    McKee, M.3    Skog, J.4    Paunescu, T.G.5    Da Silva, N.6    Brown, D.7    Russo, L.M.8
  • 38
    • 84859897419 scopus 로고    scopus 로고
    • Biogenesis of Y RNA-derived small RNAs is independent of the microRNA pathway
    • 22575660
    • Nicolas FE, Hall AE, Csorba T, Turnbull C, Dalmay T. Biogenesis of Y RNA-derived small RNAs is independent of the microRNA pathway. FEBS Lett 2012; 586:1226-30; PMID:22575660; http://dx.doi.org/10.1016/j.febslet.2012.03.026
    • (2012) FEBS Lett , vol.586 , pp. 1226-1230
    • Nicolas, F.E.1    Hall, A.E.2    Csorba, T.3    Turnbull, C.4    Dalmay, T.5
  • 39
    • 84887110361 scopus 로고    scopus 로고
    • 5′-YRNA fragments derived by processing of transcripts from specific YRNA genes and pseudogenes are abundant in human serum and plasma
    • 24022222
    • Dhahbi JM, Spindler SR, Atamna H, Boffelli D, Mote P, Martin DI. 5′-YRNA fragments derived by processing of transcripts from specific YRNA genes and pseudogenes are abundant in human serum and plasma. Physiol Genomics 2013; 45:990-8; PMID:24022222; http://dx.doi.org/10.1152/physiolgenomics.00129.2013
    • (2013) Physiol Genomics , vol.45 , pp. 990-998
    • Dhahbi, J.M.1    Spindler, S.R.2    Atamna, H.3    Boffelli, D.4    Mote, P.5    Martin, D.I.6
  • 40
    • 85016460918 scopus 로고    scopus 로고
    • Quantitative and qualitative analysis of small RNAs in human endothelial cells and exosomes provides insights into localized RNA processing, degradation and sorting
    • 26027894
    • van Balkom BW, Eisele AS, Pegtel DM, Bervoets S, Verhaar MC. Quantitative and qualitative analysis of small RNAs in human endothelial cells and exosomes provides insights into localized RNA processing, degradation and sorting. J Extracell Vesicles 2015; 4:26760; PMID:26027894; http://dx.doi.org/10.3402/jev.v4.26760
    • (2015) J Extracell Vesicles , vol.4 , pp. 26760
    • van Balkom, B.W.1    Eisele, A.S.2    Pegtel, D.M.3    Bervoets, S.4    Verhaar, M.C.5
  • 42
    • 0026025407 scopus 로고
    • Vaults. III. Vault ribonucleoprotein particles open into flower-like structures with octagonal symmetry
    • 1988458
    • Kedersha NL, Heuser JE, Chugani DC, Rome LH. Vaults. III. Vault ribonucleoprotein particles open into flower-like structures with octagonal symmetry. J Cell Biol 1991; 112:225-35; PMID:1988458; http://dx.doi.org/10.1083/jcb.112.2.225
    • (1991) J Cell Biol , vol.112 , pp. 225-235
    • Kedersha, N.L.1    Heuser, J.E.2    Chugani, D.C.3    Rome, L.H.4
  • 43
    • 84883111834 scopus 로고    scopus 로고
    • Glioma microvesicles carry selectively packaged coding and non-coding RNAs which alter gene expression in recipient cells
    • 23807490
    • Li CC, Eaton SA, Young PE, Lee M, Shuttleworth R, Humphreys DT, Grau GE, Combes V, Bebawy M, Gong J, et al. Glioma microvesicles carry selectively packaged coding and non-coding RNAs which alter gene expression in recipient cells. RNA Biol 2013; 10:1333-44; PMID:23807490; http://dx.doi.org/10.4161/rna.25281
    • (2013) RNA Biol , vol.10 , pp. 1333-1344
    • Li, C.C.1    Eaton, S.A.2    Young, P.E.3    Lee, M.4    Shuttleworth, R.5    Humphreys, D.T.6    Grau, G.E.7    Combes, V.8    Bebawy, M.9    Gong, J.10
  • 44
    • 84926669277 scopus 로고    scopus 로고
    • 5′ tRNA Halves: The Next Generation of Immune Signaling Molecules
    • 25745425
    • Dhahbi JM. 5′ tRNA Halves:The Next Generation of Immune Signaling Molecules. Front Immunol 2015; 6:74; PMID:25745425; http://dx.doi.org/10.3389/fimmu.2015.00074
    • (2015) Front Immunol , vol.6 , pp. 74
    • Dhahbi, J.M.1
  • 45
    • 84936869846 scopus 로고    scopus 로고
    • Assessment of small RNA sorting into different extracellular fractions revealed by high-throughput sequencing of breast cell lines
    • 25940616
    • Tosar JP, Gambaro F, Sanguinetti J, Bonilla B, Witwer KW, Cayota A. Assessment of small RNA sorting into different extracellular fractions revealed by high-throughput sequencing of breast cell lines. Nucleic Acids Res 2015; 43:5601-16; PMID:25940616; http://dx.doi.org/10.1093/nar/gkv432
    • (2015) Nucleic Acids Res , vol.43 , pp. 5601-5616
    • Tosar, J.P.1    Gambaro, F.2    Sanguinetti, J.3    Bonilla, B.4    Witwer, K.W.5    Cayota, A.6
  • 47
    • 67650604265 scopus 로고    scopus 로고
    • Stressing out over tRNA cleavage
    • 19632169
    • Thompson DM, Parker R. Stressing out over tRNA cleavage. Cell 2009; 138:215-9; PMID:19632169; http://dx.doi.org/10.1016/j.cell.2009.07.001
    • (2009) Cell , vol.138 , pp. 215-219
    • Thompson, D.M.1    Parker, R.2
  • 48
    • 84870599244 scopus 로고    scopus 로고
    • Small RNA deep sequencing reveals a distinct miRNA signature released in exosomes from prion-infected neuronal cells
    • 22965126
    • Bellingham SA, Coleman BM, Hill AF. Small RNA deep sequencing reveals a distinct miRNA signature released in exosomes from prion-infected neuronal cells. Nucleic Acids Res 2012; 40:10937-49; PMID:22965126; http://dx.doi.org/10.1093/nar/gks832
    • (2012) Nucleic Acids Res , vol.40 , pp. 10937-10949
    • Bellingham, S.A.1    Coleman, B.M.2    Hill, A.F.3
  • 50
    • 0037316303 scopus 로고    scopus 로고
    • A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
    • 12538238
    • Bolstad BM, Irizarry RA, Astrand M, Speed TP. A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. Bioinformatics 2003; 19:185-93; PMID:12538238; http://dx.doi.org/10.1093/bioinformatics/19.2.185
    • (2003) Bioinformatics , vol.19 , pp. 185-193
    • Bolstad, B.M.1    Irizarry, R.A.2    Astrand, M.3    Speed, T.P.4
  • 51
    • 84863076731 scopus 로고    scopus 로고
    • The protein interaction network of extracellular vesicles derived from human colorectal cancer cells
    • 22149170
    • Choi DS, Yang JS, Choi EJ, Jang SC, Park S, Kim OY, Hwang D, Kim KP, Kim YK, Kim S, et al. The protein interaction network of extracellular vesicles derived from human colorectal cancer cells. J Proteome Res 2012; 11:1144-51; PMID:22149170; http://dx.doi.org/10.1021/pr200842h
    • (2012) J Proteome Res , vol.11 , pp. 1144-1151
    • Choi, D.S.1    Yang, J.S.2    Choi, E.J.3    Jang, S.C.4    Park, S.5    Kim, O.Y.6    Hwang, D.7    Kim, K.P.8    Kim, Y.K.9    Kim, S.10
  • 52
    • 84875073353 scopus 로고    scopus 로고
    • Adaptive filtering of microarray gene expression data based on Gaussian mixture decomposition
    • 23510016
    • Marczyk M, Jaksik R, Polanski A, Polanska J. Adaptive filtering of microarray gene expression data based on Gaussian mixture decomposition. BMC Bioinformatics 2013; 14:101; PMID:23510016; http://dx.doi.org/10.1186/1471-2105-14-101
    • (2013) BMC Bioinformatics , vol.14 , pp. 101
    • Marczyk, M.1    Jaksik, R.2    Polanski, A.3    Polanska, J.4
  • 53
    • 0001710505 scopus 로고
    • Analysis of a complex of statistical variables into principal components
    • Hotelling H. Analysis of a complex of statistical variables into principal components. J Educational Psychol 1933; 24:417-41; http://dx.doi.org/10.1037/h0071325
    • (1933) J Educational Psychol , vol.24 , pp. 417-441
    • Hotelling, H.1
  • 54
    • 67349266694 scopus 로고    scopus 로고
    • Universal sample preparation method for proteome analysis
    • 19377485
    • Wisniewski JR, Zougman A, Nagaraj N, Mann M. Universal sample preparation method for proteome analysis. Nat Methods 2009; 6:359-62; PMID:19377485; http://dx.doi.org/10.1038/nmeth.1322
    • (2009) Nat Methods , vol.6 , pp. 359-362
    • Wisniewski, J.R.1    Zougman, A.2    Nagaraj, N.3    Mann, M.4
  • 55
    • 33750970827 scopus 로고    scopus 로고
    • Characterization of the outer membrane protein profile from disease-related Helicobacter pylori isolates by subcellular fractionation and nano-LC FT-ICR MS analysis
    • 17081072
    • Carlsohn E, Nystrom J, Karlsson H, Svennerholm AM, Nilsson CL. Characterization of the outer membrane protein profile from disease-related Helicobacter pylori isolates by subcellular fractionation and nano-LC FT-ICR MS analysis. J Proteome Res 2006; 5:3197-204; PMID:17081072; http://dx.doi.org/10.1021/pr060181p
    • (2006) J Proteome Res , vol.5 , pp. 3197-3204
    • Carlsohn, E.1    Nystrom, J.2    Karlsson, H.3    Svennerholm, A.M.4    Nilsson, C.L.5
  • 56
    • 33746930864 scopus 로고    scopus 로고
    • A uniform proteomics MS/MS analysis platform utilizing open XML file formats
    • 0017, 16729052
    • Keller A, Eng J, Zhang N, Li XJ, Aebersold R. A uniform proteomics MS/MS analysis platform utilizing open XML file formats. Mol Syst Biol 2005; 1:2005 0017; PMID:16729052; http://dx.doi.org/10.1038/msb4100024
    • (2005) Mol Syst Biol , vol.1 , pp. 2005
    • Keller, A.1    Eng, J.2    Zhang, N.3    Li, X.J.4    Aebersold, R.5
  • 57
    • 54949129419 scopus 로고    scopus 로고
    • ProteoWizard: open source software for rapid proteomics tools development
    • 18606607
    • Kessner D, Chambers M, Burke R, Agus D, Mallick P. ProteoWizard:open source software for rapid proteomics tools development. Bioinformatics 2008; 24:2534-6; PMID:18606607; http://dx.doi.org/10.1093/bioinformatics/btn323
    • (2008) Bioinformatics , vol.24 , pp. 2534-2536
    • Kessner, D.1    Chambers, M.2    Burke, R.3    Agus, D.4    Mallick, P.5
  • 58
    • 33846165487 scopus 로고    scopus 로고
    • Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation
    • 17187058
    • Lu P, Vogel C, Wang R, Yao X, Marcotte EM. Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation. Nat Biotechnol 2007; 25:117-24; PMID:17187058; http://dx.doi.org/10.1038/nbt1270
    • (2007) Nat Biotechnol , vol.25 , pp. 117-124
    • Lu, P.1    Vogel, C.2    Wang, R.3    Yao, X.4    Marcotte, E.M.5
  • 60
    • 12344269924 scopus 로고    scopus 로고
    • GO::TermFinder–open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes
    • 15297299
    • Boyle EI, Weng S, Gollub J, Jin H, Botstein D, Cherry JM, Sherlock G. GO::TermFinder–open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes. Bioinformatics 2004; 20:3710-5; PMID:15297299; http://dx.doi.org/10.1093/bioinformatics/bth456
    • (2004) Bioinformatics , vol.20 , pp. 3710-3715
    • Boyle, E.I.1    Weng, S.2    Gollub, J.3    Jin, H.4    Botstein, D.5    Cherry, J.M.6    Sherlock, G.7
  • 62
    • 0032441150 scopus 로고    scopus 로고
    • Cluster analysis and display of genome-wide expression patterns
    • 9843981
    • Eisen MB, Spellman PT, Brown PO, Botstein D. Cluster analysis and display of genome-wide expression patterns. Proc Natl Acad Sci U S A 1998; 95:14863-8; PMID:9843981; http://dx.doi.org/10.1073/pnas.95.25.14863
    • (1998) Proc Natl Acad Sci U S A , vol.95 , pp. 14863-14868
    • Eisen, M.B.1    Spellman, P.T.2    Brown, P.O.3    Botstein, D.4
  • 63
    • 84952503562 scopus 로고
    • Thirteen ways to look at the correlation coefficient
    • Rodgers JL, Nicewander WA. Thirteen ways to look at the correlation coefficient. Am Statistician 1988; 42:59-66; http://dx.doi.org/10.2307/2685263
    • (1988) Am Statistician , vol.42 , pp. 59-66
    • Rodgers, J.L.1    Nicewander, W.A.2


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