NovoBreak: Local assembly for breakpoint detection in cancer genomes

Nature Methods

Volumn 14, Issue 1, 2016, Pages 65-67

  Chong, Zechen ^a   Ruan, Jue ^b   Gao, Min ^c   Zhou, Wanding ^a   Chen, Tenghui ^a   Fan, Xian ^a   Ding, Li ^d   Lee, Anna Y ^e   Boutros, Paul ^e,f,g   Chen, Junjie ^c   Chen, Ken ^a  

^a UNIVERSITY OF TEXAS   (United States)

^b INSTITUTE OF PLANT PROTECTION   (China)

^c UNIVERSITY OF MARYLAND SCHOOL OF MEDICINE   (United States)

^d WASHINGTON UNIVERSITY SCHOOL OF MEDICINE   (United States)

^e ONTARIO INSTITUTE FOR CANCER RESEARCH   (Canada)

^f UNIVERSITY OF TORONTO   (Canada)

^g UNIVERSITY OF TORONTO   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CANCER GENETICS; CHROMOSOME BREAKAGE; COMPUTER MODEL; CONTROLLED STUDY; GENE DELETION; GENE DUPLICATION; GENE INSERTION; GENE SEQUENCE; GENETIC ALGORITHM; GENETIC VARIATION; GENOME ANALYSIS; HUMAN; INDEL MUTATION; NEXT GENERATION SEQUENCING; NOVOBREAK; PRIORITY JOURNAL; SINGLE NUCLEOTIDE POLYMORPHISM; SOMATIC MUTATION; ALGORITHM; BIOLOGY; DNA SEQUENCE; GENETICS; HIGH THROUGHPUT SEQUENCING; HUMAN GENOME; MUTATION; NEOPLASM; PATHOLOGY; PROCEDURES; SOFTWARE; TUMOR CELL CULTURE;

ALGORITHMS; CHROMOSOME BREAKPOINTS; COMPUTATIONAL BIOLOGY; GENOME, HUMAN; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HUMANS; MUTATION; NEOPLASMS; SEQUENCE ANALYSIS, DNA; SOFTWARE; TUMOR CELLS, CULTURED;

EID: 84997610642     PISSN: 15487091     EISSN: 15487105     Source Type: Journal    
DOI: 10.1038/nmeth.4084     Document Type: Article

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