-
1
-
-
84906089611
-
Preterm labor: one syndrome, many causes
-
Romero R, Dey SK, Fisher SJ. Preterm labor: one syndrome, many causes. Science. 2014;345(6198):760-5.
-
(2014)
Science.
, vol.345
, Issue.6198
, pp. 760-765
-
-
Romero, R.1
Dey, S.K.2
Fisher, S.J.3
-
2
-
-
84947483899
-
Syncytiotrophoblast functions and fetal growth restriction during placental malaria: updates and implication for future interventions
-
Kidima WB. Syncytiotrophoblast functions and fetal growth restriction during placental malaria: updates and implication for future interventions. Biomed Res Int. 2015;2015:451735.
-
(2015)
Biomed Res Int.
, vol.2015
, pp. 451735
-
-
Kidima, W.B.1
-
3
-
-
84901358163
-
The placenta harbors a unique microbiome
-
Aagaard K, Ma J, Antony KM, Ganu R, Petrosino J, Versalovic J. The placenta harbors a unique microbiome. Sci Transl Med. 2014;6(237):237ra265.
-
(2014)
Sci Transl Med.
, vol.6
, Issue.237
-
-
Aagaard, K.1
Ma, J.2
Antony, K.M.3
Ganu, R.4
Petrosino, J.5
Versalovic, J.6
-
4
-
-
84928825527
-
The preterm placental microbiome varies in association with excess maternal gestational weight gain
-
Antony KM, Ma J, Mitchell KB, Racusin DA, Versalovic J, Aagaard K. The preterm placental microbiome varies in association with excess maternal gestational weight gain. Am J Obstet Gynecol. 2015;212(5):653. e651-616.
-
(2015)
Am J Obstet Gynecol.
, vol.212
, Issue.5
-
-
Antony, K.M.1
Ma, J.2
Mitchell, K.B.3
Racusin, D.A.4
Versalovic, J.5
Aagaard, K.6
-
5
-
-
84940835683
-
The placental microbiome varies in association with low birth weight in full-term neonates
-
Zheng J, Xiao X, Zhang Q, Mao L, Yu M, Xu J. The placental microbiome varies in association with low birth weight in full-term neonates. Nutrients. 2015;7(8):6924-37.
-
(2015)
Nutrients.
, vol.7
, Issue.8
, pp. 6924-6937
-
-
Zheng, J.1
Xiao, X.2
Zhang, Q.3
Mao, L.4
Yu, M.5
Xu, J.6
-
6
-
-
84928585458
-
Microbiome of the placenta in pre-eclampsia supports the role of bacteria in the multifactorial cause of pre-eclampsia
-
Amarasekara R, Jayasekara RW, Senanayake H, Dissanayake VH. Microbiome of the placenta in pre-eclampsia supports the role of bacteria in the multifactorial cause of pre-eclampsia. J Obstet Gynaecol Res. 2015;41(5):662-9.
-
(2015)
J Obstet Gynaecol Res.
, vol.41
, Issue.5
, pp. 662-669
-
-
Amarasekara, R.1
Jayasekara, R.W.2
Senanayake, H.3
Dissanayake, V.H.4
-
7
-
-
84874766374
-
Identification of intracellular bacteria in the basal plate of the human placenta in term and preterm gestations
-
Stout MJ, Conlon B, Landeau M, Lee I, Bower C, Zhao Q, Roehl KA, Nelson DM, Macones GA, Mysorekar IU. Identification of intracellular bacteria in the basal plate of the human placenta in term and preterm gestations. Am J Obstet Gynecol. 2013;208(3):226. e221-227.
-
(2013)
Am J Obstet Gynecol.
, vol.208
, Issue.3
-
-
Stout, M.J.1
Conlon, B.2
Landeau, M.3
Lee, I.4
Bower, C.5
Zhao, Q.6
Roehl, K.A.7
Nelson, D.M.8
Macones, G.A.9
Mysorekar, I.U.10
-
8
-
-
84893770837
-
Intracellular bacteria in placental basal plate localize to extravillous trophoblasts
-
Cao B, Mysorekar IU. Intracellular bacteria in placental basal plate localize to extravillous trophoblasts. Placenta. 2014;35(2):139-42.
-
(2014)
Placenta.
, vol.35
, Issue.2
, pp. 139-142
-
-
Cao, B.1
Mysorekar, I.U.2
-
9
-
-
84920644670
-
Reagent and laboratory contamination can critically impact sequence-based microbiome analyses
-
Salter SJ, Cox MJ, Turek EM, Calus ST, Cookson WO, Moffatt MF, Turner P, Parkhill J, Loman NJ, Walker AW. Reagent and laboratory contamination can critically impact sequence-based microbiome analyses. BMC Biol. 2014;12:87.
-
(2014)
BMC Biol.
, vol.12
, pp. 87
-
-
Salter, S.J.1
Cox, M.J.2
Turek, E.M.3
Calus, S.T.4
Cookson, W.O.5
Moffatt, M.F.6
Turner, P.7
Parkhill, J.8
Loman, N.J.9
Walker, A.W.10
-
10
-
-
84924580226
-
Tracking down the sources of experimental contamination in microbiome studies
-
Weiss S, Amir A, Hyde ER, Metcalf JL, Song SJ, Knight R. Tracking down the sources of experimental contamination in microbiome studies. Genome Biol. 2014;15(12):564.
-
(2014)
Genome Biol.
, vol.15
, Issue.12
, pp. 564
-
-
Weiss, S.1
Amir, A.2
Hyde, E.R.3
Metcalf, J.L.4
Song, S.J.5
Knight, R.6
-
11
-
-
80053122563
-
Topographical continuity of bacterial populations in the healthy human respiratory tract
-
Charlson ES, Bittinger K, Haas AR, Fitzgerald AS, Frank I, Yadav A, Bushman FD, Collman RG. Topographical continuity of bacterial populations in the healthy human respiratory tract. Am J Respir Crit Care Med. 2011;184(8): 957-63.
-
(2011)
Am J Respir Crit Care Med.
, vol.184
, Issue.8
, pp. 957-963
-
-
Charlson, E.S.1
Bittinger, K.2
Haas, A.R.3
Fitzgerald, A.S.4
Frank, I.5
Yadav, A.6
Bushman, F.D.7
Collman, R.G.8
-
12
-
-
85017294457
-
Improved characterization of medically relevant fungi in the human respiratory tract using next-generation sequencing
-
Bittinger K, Charlson ES, Loy E, Shirley DJ, Haas AR, Laughlin A, Yi Y, Wu GD, Lewis JD, Frank I, et al. Improved characterization of medically relevant fungi in the human respiratory tract using next-generation sequencing. Genome Biol. 2014;15(10):487.
-
(2014)
Genome Biol.
, vol.15
, Issue.10
, pp. 487
-
-
Bittinger, K.1
Charlson, E.S.2
Loy, E.3
Shirley, D.J.4
Haas, A.R.5
Laughlin, A.6
Yi, Y.7
Wu, G.D.8
Lewis, J.D.9
Frank, I.10
-
13
-
-
84866126809
-
Assessing bacterial populations in the lung by replicate analysis of samples from the upper and lower respiratory tracts
-
Charlson ES, Bittinger K, Chen J, Diamond JM, Li H, Collman RG, Bushman FD. Assessing bacterial populations in the lung by replicate analysis of samples from the upper and lower respiratory tracts. PLoS One. 2012;7(9): e42786.
-
(2012)
PLoS One.
, vol.7
, Issue.9
-
-
Charlson, E.S.1
Bittinger, K.2
Chen, J.3
Diamond, J.M.4
Li, H.5
Collman, R.G.6
Bushman, F.D.7
-
14
-
-
78650868433
-
Disordered microbial communities in the upper respiratory tract of cigarette smokers
-
Charlson ES, Chen J, Custers-Allen R, Bittinger K, Li H, Sinha R, Hwang J, Bushman FD, Collman RG. Disordered microbial communities in the upper respiratory tract of cigarette smokers. PLoS One. 2010;5(12):e15216.
-
(2010)
PLoS One.
, vol.5
, Issue.12
-
-
Charlson, E.S.1
Chen, J.2
Custers-Allen, R.3
Bittinger, K.4
Li, H.5
Sinha, R.6
Hwang, J.7
Bushman, F.D.8
Collman, R.G.9
-
15
-
-
84866429095
-
Lung-enriched organisms and aberrant bacterial and fungal respiratory microbiota after lung transplant
-
Charlson ES, Diamond JM, Bittinger K, Fitzgerald AS, Yadav A, Haas AR, Bushman FD, Collman RG. Lung-enriched organisms and aberrant bacterial and fungal respiratory microbiota after lung transplant. Am J Respir Crit Care Med. 2012;186(6):536-45.
-
(2012)
Am J Respir Crit Care Med.
, vol.186
, Issue.6
, pp. 536-545
-
-
Charlson, E.S.1
Diamond, J.M.2
Bittinger, K.3
Fitzgerald, A.S.4
Yadav, A.5
Haas, A.R.6
Bushman, F.D.7
Collman, R.G.8
-
16
-
-
40149103278
-
Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex
-
Hamady M, Walker JJ, Harris JK, Gold NJ, Knight R. Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex. Nat Methods. 2008;5(3):235-7.
-
(2008)
Nat Methods.
, vol.5
, Issue.3
, pp. 235-237
-
-
Hamady, M.1
Walker, J.J.2
Harris, J.K.3
Gold, N.J.4
Knight, R.5
-
17
-
-
56649124715
-
The influence of sex, handedness, and washing on the diversity of hand surface bacteria
-
Fierer N, Hamady M, Lauber CL, Knight R. The influence of sex, handedness, and washing on the diversity of hand surface bacteria. Proc Natl Acad Sci U S A. 2008;105(46):17994-9.
-
(2008)
Proc Natl Acad Sci U S A.
, vol.105
, Issue.46
, pp. 17994-17999
-
-
Fierer, N.1
Hamady, M.2
Lauber, C.L.3
Knight, R.4
-
18
-
-
80053618114
-
Linking long-term dietary patterns with gut microbial enterotypes
-
Wu GD, Chen J, Hoffmann C, Bittinger K, Chen YY, Keilbaugh SA, Bewtra M, Knights D, Walters WA, Knight R, et al. Linking long-term dietary patterns with gut microbial enterotypes. Science. 2011;334(6052):105-8.
-
(2011)
Science.
, vol.334
, Issue.6052
, pp. 105-108
-
-
Wu, G.D.1
Chen, J.2
Hoffmann, C.3
Bittinger, K.4
Chen, Y.Y.5
Keilbaugh, S.A.6
Bewtra, M.7
Knights, D.8
Walters, W.A.9
Knight, R.10
-
19
-
-
84862276328
-
Structure, function and diversity of the healthy human microbiome
-
Human Microbiome Project C. Structure, function and diversity of the healthy human microbiome. Nature. 2012;486(7402):207-14.
-
(2012)
Nature.
, vol.486
, Issue.7402
, pp. 207-214
-
-
-
20
-
-
77955067191
-
Sampling and pyrosequencing methods for characterizing bacterial communities in the human gut using 16S sequence tags
-
Wu GD, Lewis JD, Hoffmann C, Chen YY, Knight R, Bittinger K, Hwang J, Chen J, Berkowsky R, Nessel L, et al. Sampling and pyrosequencing methods for characterizing bacterial communities in the human gut using 16S sequence tags. BMC Microbiol. 2010;10:206.
-
(2010)
BMC Microbiol.
, vol.10
, pp. 206
-
-
Wu, G.D.1
Lewis, J.D.2
Hoffmann, C.3
Chen, Y.Y.4
Knight, R.5
Bittinger, K.6
Hwang, J.7
Chen, J.8
Berkowsky, R.9
Nessel, L.10
-
21
-
-
79952750340
-
Vaginal microbiome of reproductive-age women
-
Ravel J, Gajer P, Abdo Z, Schneider GM, Koenig SS, McCulle SL, Karlebach S, Gorle R, Russell J, Tacket CO, et al. Vaginal microbiome of reproductive-age women. Proc Natl Acad Sci U S A. 2011;108 Suppl 1:4680-7.
-
(2011)
Proc Natl Acad Sci U S A.
, vol.108
, pp. 4680-4687
-
-
Ravel, J.1
Gajer, P.2
Abdo, Z.3
Schneider, G.M.4
Koenig, S.S.5
McCulle, S.L.6
Karlebach, S.7
Gorle, R.8
Russell, J.9
Tacket, C.O.10
-
22
-
-
84891590750
-
Microbiome assembly across multiple body sites in low-birthweight infants
-
Costello EK, Carlisle EM, Bik EM, Morowitz MJ, Relman DA. Microbiome assembly across multiple body sites in low-birthweight infants. MBio. 2013; 4(6):e00782-00713.
-
(2013)
MBio.
, vol.4
, Issue.6
, pp. e00782-e00713
-
-
Costello, E.K.1
Carlisle, E.M.2
Bik, E.M.3
Morowitz, M.J.4
Relman, D.A.5
-
23
-
-
84873510063
-
A guide to enterotypes across the human body: meta-analysis of microbial community structures in human microbiome datasets
-
Koren O, Knights D, Gonzalez A, Waldron L, Segata N, Knight R, Huttenhower C, Ley RE. A guide to enterotypes across the human body: meta-analysis of microbial community structures in human microbiome datasets. PLoS Comput Biol. 2013;9(1):e1002863.
-
(2013)
PLoS Comput Biol.
, vol.9
, Issue.1
-
-
Koren, O.1
Knights, D.2
Gonzalez, A.3
Waldron, L.4
Segata, N.5
Knight, R.6
Huttenhower, C.7
Ley, R.E.8
-
24
-
-
84989245447
-
16S rRNA genebased profiling of the human infant gut microbiota is strongly influenced by sample processing and PCR primer choice
-
Walker AW, Martin JC, Scott P, Parkhill J, Flint HJ, Scott KP. 16S rRNA genebased profiling of the human infant gut microbiota is strongly influenced by sample processing and PCR primer choice. Microbiome. 2015;3:26.
-
(2015)
Microbiome.
, vol.3
, pp. 26
-
-
Walker, A.W.1
Martin, J.C.2
Scott, P.3
Parkhill, J.4
Flint, H.J.5
Scott, K.P.6
-
25
-
-
84962524929
-
The placental microbiome is altered among subjects with spontaneous preterm birth with and without chorioamnionitis
-
Prince AL, Ma J, Kannan PS, Alvarez M, Gisslen T, Harris RA, et al. The placental microbiome is altered among subjects with spontaneous preterm birth with and without chorioamnionitis. Am J Obstet Gynecol. 2016;214(5):627.
-
(2016)
Am J Obstet Gynecol.
, vol.214
, Issue.5
, pp. 627
-
-
Prince, A.L.1
Ma, J.2
Kannan, P.S.3
Alvarez, M.4
Gisslen, T.5
Harris, R.A.6
-
26
-
-
84948160354
-
Alterations of the subgingival microbiota in pediatric Crohn's disease studied longitudinally in discovery and validation cohorts
-
Kelsen J, Bittinger K, Pauly-Hubbard H, Posivak L, Grunberg S, Baldassano R, Lewis JD, Wu GD, Bushman FD. Alterations of the subgingival microbiota in pediatric Crohn's disease studied longitudinally in discovery and validation cohorts. Inflamm Bowel Dis. 2015;21(12):2797-805.
-
(2015)
Inflamm Bowel Dis.
, vol.21
, Issue.12
, pp. 2797-2805
-
-
Kelsen, J.1
Bittinger, K.2
Pauly-Hubbard, H.3
Posivak, L.4
Grunberg, S.5
Baldassano, R.6
Lewis, J.D.7
Wu, G.D.8
Bushman, F.D.9
-
27
-
-
84930415809
-
A description of the methods of the Nulliparous Pregnancy Outcomes Study: monitoring mothers-to-be (nuMoM2b)
-
Haas DM, Parker CB, Wing DA, Parry S, Grobman WA, Mercer BM, Simhan HN, Hoffman MK, Silver RM, Wadhwa P, et al. A description of the methods of the Nulliparous Pregnancy Outcomes Study: monitoring mothers-to-be (nuMoM2b). Am J Obstet Gynecol. 2015;212(4):539. e531-539 e524.
-
(2015)
Am J Obstet Gynecol.
, vol.212
, Issue.4
-
-
Haas, D.M.1
Parker, C.B.2
Wing, D.A.3
Parry, S.4
Grobman, W.A.5
Mercer, B.M.6
Simhan, H.N.7
Hoffman, M.K.8
Silver, R.M.9
Wadhwa, P.10
-
28
-
-
84896545281
-
Optimising sample collection for placental research
-
Burton GJ, Sebire NJ, Myatt L, Tannetta D, Wang YL, Sadovsky Y, Staff AC, Redman CW. Optimising sample collection for placental research. Placenta. 2014;35(1):9-22.
-
(2014)
Placenta.
, vol.35
, Issue.1
, pp. 9-22
-
-
Burton, G.J.1
Sebire, N.J.2
Myatt, L.3
Tannetta, D.4
Wang, Y.L.5
Sadovsky, Y.6
Staff, A.C.7
Redman, C.W.8
-
29
-
-
77249163771
-
Metagenomic analyses reveal antibiotic-induced temporal and spatial changes in intestinal microbiota with associated alterations in immune cell homeostasis
-
Hill DA, Hoffmann C, Abt MC, Du Y, Kobuley D, Kirn TJ, Bushman FD, Artis D. Metagenomic analyses reveal antibiotic-induced temporal and spatial changes in intestinal microbiota with associated alterations in immune cell homeostasis. Mucosal Immunol. 2010;3(2):148-58.
-
(2010)
Mucosal Immunol.
, vol.3
, Issue.2
, pp. 148-158
-
-
Hill, D.A.1
Hoffmann, C.2
Abt, M.C.3
Du, Y.4
Kobuley, D.5
Kirn, T.J.6
Bushman, F.D.7
Artis, D.8
-
30
-
-
0027509645
-
Structure of the 16 S ribosomal RNA of the thermophilic cyanobacterium Chlorogloeopsis HTF ('Mastigocladus laminosus HTF') strain PCC7518, and phylogenetic analysis
-
Wilmotte A, Van der Auwera G, De Wachter R. Structure of the 16 S ribosomal RNA of the thermophilic cyanobacterium Chlorogloeopsis HTF ('Mastigocladus laminosus HTF') strain PCC7518, and phylogenetic analysis. FEBS Lett. 1993;317(1-2):96-100.
-
(1993)
FEBS Lett.
, vol.317
, Issue.1-2
, pp. 96-100
-
-
Wilmotte, A.1
Van der Auwera, G.2
De Wachter, R.3
-
31
-
-
84881484788
-
Cohabiting family members share microbiota with one another and with their dogs
-
Song SJ, Lauber C, Costello EK, Lozupone CA, Humphrey G, Berg-Lyons D, Caporaso JG, Knights D, Clemente JC, Nakielny S, et al. Cohabiting family members share microbiota with one another and with their dogs. Elife. 2013;2:e00458.
-
(2013)
Elife.
, vol.2
, pp. e00458
-
-
Song, S.J.1
Lauber, C.2
Costello, E.K.3
Lozupone, C.A.4
Humphrey, G.5
Berg-Lyons, D.6
Caporaso, J.G.7
Knights, D.8
Clemente, J.C.9
Nakielny, S.10
-
32
-
-
79952005915
-
Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample
-
Caporaso JG, Lauber CL, Walters WA, Berg-Lyons D, Lozupone CA, Turnbaugh PJ, Fierer N, Knight R. Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample. Proc Natl Acad Sci U S A. 2011; 108 Suppl 1:4516-22.
-
(2011)
Proc Natl Acad Sci U S A.
, vol.108
, pp. 4516-4522
-
-
Caporaso, J.G.1
Lauber, C.L.2
Walters, W.A.3
Berg-Lyons, D.4
Lozupone, C.A.5
Turnbaugh, P.J.6
Fierer, N.7
Knight, R.8
-
33
-
-
84863981120
-
Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms
-
Caporaso JG, Lauber CL, Walters WA, Berg-Lyons D, Huntley J, Fierer N, Owens SM, Betley J, Fraser L, Bauer M, et al. Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms. ISME J. 2012;6(8):1621-4.
-
(2012)
ISME J.
, vol.6
, Issue.8
, pp. 1621-1624
-
-
Caporaso, J.G.1
Lauber, C.L.2
Walters, W.A.3
Berg-Lyons, D.4
Huntley, J.5
Fierer, N.6
Owens, S.M.7
Betley, J.8
Fraser, L.9
Bauer, M.10
-
34
-
-
77952243141
-
QIIME allows analysis of highthroughput community sequencing data
-
Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, Costello EK, Fierer N, Pena AG, Goodrich JK, Gordon JI, et al. QIIME allows analysis of highthroughput community sequencing data. Nat Methods. 2010;7(5):335-6.
-
(2010)
Nat Methods.
, vol.7
, Issue.5
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
Fierer, N.7
Pena, A.G.8
Goodrich, J.K.9
Gordon, J.I.10
-
35
-
-
84965039431
-
-
R Foundation for Statistical Computing, Vienna, Austria. 2014.
-
R Core Team. R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria, 2012. 2014. ISBN 3-900051-07-0.
-
(2012)
R: a language and environment for statistical computing
-
-
-
36
-
-
84964927929
-
-
Vienna, Austria: R Foundation for Statistical Computing.
-
R Development Core Team. R: a language and environment for statistical computing. Vienna, Austria: R Foundation for Statistical Computing; 2015.
-
(2015)
R: a language and environment for statistical computing
-
-
-
37
-
-
77957244650
-
Search and clustering orders of magnitude faster than BLAST
-
Edgar RC. Search and clustering orders of magnitude faster than BLAST. Bioinformatics. 2010;26(19):2460-1.
-
(2010)
Bioinformatics.
, vol.26
, Issue.19
, pp. 2460-2461
-
-
Edgar, R.C.1
-
38
-
-
75249107844
-
PyNAST: a flexible tool for aligning sequences to a template alignment
-
Caporaso JG, Bittinger K, Bushman FD, DeSantis TZ, Andersen GL, Knight R. PyNAST: a flexible tool for aligning sequences to a template alignment. Bioinformatics. 2010;26(2):266-7.
-
(2010)
Bioinformatics.
, vol.26
, Issue.2
, pp. 266-267
-
-
Caporaso, J.G.1
Bittinger, K.2
Bushman, F.D.3
DeSantis, T.Z.4
Andersen, G.L.5
Knight, R.6
-
39
-
-
77949718257
-
FastTree 2-approximately maximum-likelihood trees for large alignments
-
Price MN, Dehal PS, Arkin AP. FastTree 2-approximately maximum-likelihood trees for large alignments. PLoS One. 2010;5(3):e9490.
-
(2010)
PLoS One.
, vol.5
, Issue.3
-
-
Price, M.N.1
Dehal, P.S.2
Arkin, A.P.3
-
40
-
-
0001857117
-
16S/23S rRNA sequencing
-
Stackebrandt E, Goodfellow M, editors. New York: John Wiley and Sons.
-
Lane DJ. 16S/23S rRNA sequencing. In: Stackebrandt E, Goodfellow M, editors. Nucleic Acid Techniques in Bacterial Systematics. New York: John Wiley and Sons; 1991. p. 115-75.
-
(1991)
Nucleic Acid Techniques in Bacterial Systematics
, pp. 115-175
-
-
Lane, D.J.1
-
41
-
-
29144464937
-
UniFrac: a new phylogenetic method for comparing microbial communities
-
Lozupone C, Knight R. UniFrac: a new phylogenetic method for comparing microbial communities. Appl Environ Microbiol. 2005;71(12):8228-35.
-
(2005)
Appl Environ Microbiol.
, vol.71
, Issue.12
, pp. 8228-8235
-
-
Lozupone, C.1
Knight, R.2
-
42
-
-
84971463552
-
-
Oksanen J, Blanchet FG, Kindt R, Legendre P, Minchin PR, O'Hara RB, Simpson GL, Solymos P, Stevens MHH, Wagner H. Vegan: Community Ecology Package. 2015.
-
(2015)
Vegan: Community Ecology Package
-
-
Oksanen, J.1
Blanchet, F.G.2
Kindt, R.3
Legendre, P.4
Minchin, P.R.5
O'Hara, R.B.6
Simpson, G.L.7
Solymos, P.8
Stevens, M.H.H.9
Wagner, H.10
-
43
-
-
1042304216
-
APE: Analyses of Phylogenetics and Evolution in R language
-
Paradis E, Claude J, Strimmer K. APE: Analyses of Phylogenetics and Evolution in R language. Bioinformatics. 2004;20(2):289-90.
-
(2004)
Bioinformatics.
, vol.20
, Issue.2
, pp. 289-290
-
-
Paradis, E.1
Claude, J.2
Strimmer, K.3
-
44
-
-
84944404484
-
A standardized, extensible framework for optimizing classification improves marker-gene taxonomic assignments
-
Bokulich NA, Rideout JR, Kopylova E, Bolyen E, Patnode J, Ellett Z, McDonald D, Wolfe B, Maurice CF, Dutton RJ. A standardized, extensible framework for optimizing classification improves marker-gene taxonomic assignments. PeerJ PrePrints; 2015.
-
(2015)
PeerJ PrePrints
-
-
Bokulich, N.A.1
Rideout, J.R.2
Kopylova, E.3
Bolyen, E.4
Patnode, J.5
Ellett, Z.6
McDonald, D.7
Wolfe, B.8
Maurice, C.F.9
Dutton, R.J.10
-
45
-
-
84857122937
-
An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea
-
McDonald D, Price MN, Goodrich J, Nawrocki EP, DeSantis TZ, Probst A, Andersen GL, Knight R, Hugenholtz P. An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea. ISME J. 2012;6(3):610-8.
-
(2012)
ISME J.
, vol.6
, Issue.3
, pp. 610-618
-
-
McDonald, D.1
Price, M.N.2
Goodrich, J.3
Nawrocki, E.P.4
DeSantis, T.Z.5
Probst, A.6
Andersen, G.L.7
Knight, R.8
Hugenholtz, P.9
-
46
-
-
84881222948
-
Bayesian estimation supersedes the t test
-
Kruschke JK. Bayesian estimation supersedes the t test. J Exp Psychol Gen. 2013;142(2):573-603.
-
(2013)
J Exp Psychol Gen.
, vol.142
, Issue.2
, pp. 573-603
-
-
Kruschke, J.K.1
|