Penium margaritaceum: A unicellular model organism for studying plant cell wall architecture and dynamics

Plants

Volumn 3, Issue 4, 2014, Pages 543-558

  Domozych, David S ^a  

^a SKIDMORE COLLEGE   (United States)

Author keywords

Cell wall; Live cell labeling; Monoclonal antibody; Pectin; Penium; Protoplast; Transformed cell lines

Indexed keywords

EID: 84995307604     PISSN: None     EISSN: 22237747     Source Type: Journal    
DOI: 10.3390/plants3040543     Document Type: Review

References (50)

1. Harris, D.; Bulone, V.; Ding, S.-Y.; DeBolt, S. Tools for cellulose analysis in plant cell walls. Plant Physiol. 2010, 153, 420–426.
2. Popper, Z. The plant cell wall. Methods and protocols. Ann. Bot. 2012, 109, vii–viii.
3. Gilbert, H.J.; Knox, J.P.; Boraston, A.B. Advances in understanding the molecular basis of plant cell wall polysaccharide recognition by carbohydrate-binding modules. Curr. Opin. Struct. Biol. 2013, 23, 669–677.
4. Pedersen, H.L.; Fangel, J.U.; McCleary, B.; Ruzanski, C.; Rydahl, M.G.; Ralet, M.-C.; Farkas, V.; von Schantz, L.; Marcus, S.E.; Andersen, M.C.F.; et al. Versatile high-resolution oligosaccharide microarrays for plant glycobiology and cell wall research. J. Biol. Chem. 2012, 287, 39429–39438.
5. Pattathil, S.; Avci, U.; Baldwin, D.; Swennes, A.G.; McGill, J.A.; Popper, Z.; Bootten, T.; Albert, A.; Davis, R.H.; Chennareddy, C.; et al. A comprehensive toolkit of plant cell wall glycan-directed monoclonal antibodies. Plant Physiol. 2010, 153, 514–525.
6. Lee, K.J.; Marcus, S.E.; Knox, J.P. Cell wall biology: Perspectives from cell wall imaging. Mol. Plant 2011, 4, 212–219.
7. Cosgrove, D.J.; Jarvis, M.C. Comparative structure and biomechanics of plant primary and secondary cell walls. Front. Plant Sci. 2012, 3, e204.
8. Doblin, M.S.; Pettolino, F.; Bacic, A. Plant cell walls: The skeleton of the plant world. Funct. Plant. Biol. 2010, 37, 357–381.
9. Caffall, K.H.; Mohnen, D. The structure, function, and biosynthesis of plant cell wall pectic polysaccharides. Carbohydr. Res. 2009, 344, 1879–1900.
10. Keegstra, K. Plant cell walls. Plant Physiol. 2010, 154, 483–486.
11. Popper, Z.A.; Gurvan, M.; Hervé, C.; Domozych, D.S.; Willats, W.G.T.; Tuohy, M.; Kloareg, B.; Stengel, D.B. Evolution and diversity of plant cell walls: From algae to flowering plants. Ann. Rev. Plant Biol. 2011, 62, 567–590.
12. Dhugga, K.S. Biosynthesis of non-cellulosic polysaccharides of plant cell walls. Phytochemistry 2012, 74, 8–19.
13. Ruprecht, C.; Persson, S. Co-expression of cell-wall related genes: New tools and insights. Front. Plant. Sci. 2012, 3, e83.
14. Wang, H.Z.; Dixon, R.A. On-off switches for secondary cell wall biosynthesis. Mol. Plant 2012, 5, 297–303.
15. Liepman, A.H.; Wightman, R.; Geshi, N.; Turner, S.R.; Scheller, H.V. Arabidopsis—A powerful model system for plant cell wall research. Plant J. 2010, 61, 1107–1121.
16. Anderson, C.T.; Wallace, I.S.; Somerville, C.R. Metabolic click-labeling with a fucose analog reveals pectin delivery, architecture, and dynamics in Arabidopsis cell walls. Proc. Natl. Acad. Sci. USA 2012, 109, 1329–1334.
17. Tan, L.; Eberhard, S.; Pattathil, S.; Warder, C.; Glushka, J.; Yuan, C.; Hao, Z.; Zhu, X.; Avci, U.; Miller, J.S.; et al. An Arabidopsis cell wall proteoglycan consists of pectin and arabinoxylan covalently linked to an arabinogalactan protein. Plant Cell 2013, 25, 270–287.
18. Yokoyama, R.; Daisuke, T.; Fujino, T.; Itoh, T.; Nishitani, K. Cell wall dynamics in tobacco BY-2 cells. In Biotechnology in Agriculture and Technology, 2004 ed.; Nagata, T., Hasezawa, S., Inze, D., Eds.; Springer-Verlag: Berlin, Germany, 2004; Volume 53, pp. 217–230.
19. Sørensen, I.; Pettolino, F.A.; Bacic, A.; Ralph, J.; Lu, F.; O’Neill, M.A.; Fei, Z.; Rose, J.K.C.; Domozych, D.S.; Willats, W.G.T. The charophycean green algae provide insights into the early origins of plant cell walls. Plant J. 2011, 68, 201–211.
20. Sørensen, I.; Domozych, D.S.; Willats, W.G.T. How have plant cell walls evolved? Plant Physiol. 2010, 153, 366–372.
21. Domozych, D.S.; Ciancia, M.; Fangel, J.U.; Mikkelsen, M.D.; Ulvskov, P.; Willats, W.G.T. The cell walls of green algae: A journey through evolution and diversity. Front. Plant Sci. 2012, 3, e82.
22. Proseus, T.E.; Boyer, J.S. Calcium pectate chemistry causes growth to be stored in Chara corallina: A test of the pectate cycle. Plant Cell Environ. 2008, 31, 1147–1155.
23. Eder, M.; Lütz-Meindl, U. Pectin-like carbohydrates in the green alga Micrasterias characterized by cytochemical analysis and energy filtering TEM. J. Microsc. 2008, 231, 201–214.
24. Lütz-Meindl, U.; Brosch-Salomon, S. Cell wall secretion in the green alga Micrasterias. J. Microsc. 2000, 198, 208–217.
25. Domozych, D.S.; Serfis, A.; Kiemle, S.N.; Gretz, M.R. The structure and biochemistry of charophycean cell walls: I. Pectins of Penium margaritaceum. Protoplasma 2007, 230, 99–115.
26. Domozych, D.S.; Sørensen, I.; Popper, Z.A.; Ochs, J.; Andreas, A.; Fangel, J.U.; Pielach, A.; Sacks, C.; Brechka, H.; Willats, W.G.T.; et al. Pectin metabolism and assembly in the cell gall of the Charophyte Green alga Penium margaritaceum. Plant Physiol. 2014, 165, 105–118.
27. Sørensen, I.; Fei, Z.; Andreas, A.; Willats, W.G.T.; Domozych, D.S.; Rose, J.K.C. Stable transformation and reverse genetic analysis of Penium margaritaceum: A platform for studies of Charophycean Green Algae, the immediate ancestors of land plants. Plant J. 2014, 77, 339–351.
28. Krejci, M.R.; Wasserman, B.; Finney, L.; McNulty, I.; Legnini, D. Selectivity in biomineralization of barium and strontium. J. Struc. Biol. 2011, 176, 192–202.
29. Domozych, D.S.; Lambiasse, L.; Kiemle, S.N.; Gretz, M.R. Cell-wall development and bipolar growth in the desmid Penium margaritaceum (Zygnematophyceae, Streptophyta): Asymmetry in a symmetric world. J. Phycol. 2009, 45, 879–893.
30. Url, T.; Höftberger, M.; Meindl, U. Microtubule-microfilament-controlled nuclear migration in the desmid Euastrum oblongum. J. Phycol. 2004, 28, 537–544.
31. Domozych, D.S.; Kort, S.; Benton, S.; Yu, T. The extracellular polymeric substance of the green alga Penium margaritaceum and its role in biofilm formation. Biofilms 2005, 2, 129–144.
32. Nichols, H.W. Growth media-freshwater. In Handbook of Phycological Methods: Culture Methods and Growth Measurements, 1st ed.; Stein, J.R., Ed.; Cambridge University Press: New York, NY, USA, 1973; Volume 1, pp. 39–78.
33. Clausen, M.H.; Willats, W.G.T.; Knox, J.P. Synthetic methyl hexagalacturonate hapten inhibitors of anti-homogalacturonan monoclonal antibodies LM7, JIM5 and JIM7. Carbohydr. Res. 2003, 338, 1797–1800.
34. Liners, F.; Letesson, J.J.; Didembourg, C.; van Cutsem, P. Monoclonal antibodies against pectin: Recognition of a conformation induced by calcium. Plant Physiol. 1989, 91, 1419–1424.
35. Liners, F.; Thibault, J.F.; van Cutsem, P. Influence of the degree of polymerization of oligogalacturonates and of esterification pattern of pectin on their recognition by monoclonal antibodies. Plant Physiol. 1992, 99, 1099–1104.
36. Verhertbruggen, Y.; Marcus, S.E.; Haeger, A.; Ordaz-Ortiz, J.J.; Knox, J.P. An extended set of monoclonal antibodies to pectic homogalacturonan. Carbohydr. Res. 2009, 344, 1858–1862.
37. Willats, W.G.T.; Limberg, G.; Buchholt, H.C.; van Alebeek, G.J.; Benen, J.; Christensen, T.M.; Visser, J.; Voragen, A.; Mikkelsen, J.D.; Knox, J.P. Analysis of pectic epitopes recognised by hybridoma and phage display monoclonal antibodies using defined oligosaccharides, polysaccharides, and enzymatic degradation. Carbohydr. Res. 2000, 327, 309–320.
38. Domozych, D.S.; Brechka, H.; Britton, A.; Toso, M. Cell wall growth and modulation dynamics in a model unicellular green alga—Penium margaritaceum: Live cell labeling with monoclonal antibodies. J. Bot. 2011, 2011, e632165.
39. Domozych, D.S.; Sørensen, I.; Sacks, C.; Brechka, H.; Andreas, A.; Fangel, J.U.; Rose, J.K.C.; Willats, W.G.T.; Popper, Z.A. Disruption of the microtubule network alters cellulose deposition and causes major changes in pectin distribution in the cell wall of the green alga, Penium margaritaceum. J. Exp. Bot. 2014, 65, 465–479.
40. Nebenführ, A.; Staehelin, L.A. Mobile factories: Golgi dynamics in plant cells. Trends Plant Sci. 2001, 6, 160–167.
41. DaSilva, L.L.; Snapp, E.L.; Denecke, J.; Lippincott-Schwartz, J.; Hawes, C.; Brandizzi, F. Endoplasmic reticulum export sites and Golgi bodies behave as single mobile secretory units in plant cells. Plant Cell 2004, 16, 1753–1771.
42. Domozych, D.S. Exopolymer production by the green alga Penium margaritaceum: Implications for biofilm residency. Int. J. Plant Sci. 2007, 168, 763–774.
43. Ochs, J.; LaRue, T.; Tinaz, B.; Yongue, C.; Domozych, D.S. The cortical cytoskeletal network and cell-wall dynamics in the unicellular charophycean green alga Penium margaritaceum. Ann. Bot. 2014, doi:10.1093/aob/mcu013.
44. Ambrose, J.C.; Cyr, R.J. Mitotic spindle organization by the preprophase band. Mol. Plant 2008, 6, 950–960.
45. Rasmussen, C.G.; Wright, A.J.; Müller, S. The role of the cytoskeleton and associated proteins in determination of the plant cell division plane. Plant J. 2013, 75, 258–269.
46. Jopling, C.; Boue, S.; Belmonte, J.C.I. Dedifferentiation, transdifferentiation and reprogramming: Three routes to regeneration. Nat. Rev. Mol. Cell Biol. 2011, 12, 79–89.
47. Eeckhaut, T.; Lakshmanan, P.S.; Deryckere, D.; van Bockstaele, E.; van Huylenbroek, J. Progress in plant protoplast research. Planta 2013, 238, 991–1003.
48. Davey, M.R.; Anthony, P.; Patel, D.; Power, J.B. Plant protoplasts: Isolation, culture and plant regeneration. In Plant Cell Culture: Essential Methods, 1st ed.; Davey, M.R., Anthony, P., Eds.; Wiley and Sons: New York, NY, USA, 2010; pp. 153–173.
49. Hori, K.; Maruyama, F.; Fujisawa, T.; Togashi, T.; Yamamoto, N.; Seo, M.; Sato, S.; Yamada, T.; Mori, H.; Tajima, N.; et al. Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation. Nat. Commun. 2014, 5, e3978.
50. Timme, R.E.; Bachvaroff, T.S.; Delwiche, C.F. Broad phylogenomic sampling and the sister lineage of land plants. PLoS One 2012, 7, e29696.