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Volumn 54, Issue 4, 2017, Pages 217-223

The UCL low-density lipoprotein receptor gene variant database: Pathogenicity update

Author keywords

[No Author keywords available]

Indexed keywords

LOW DENSITY LIPOPROTEIN RECEPTOR; LDLR PROTEIN, HUMAN;

EID: 84994905053     PISSN: 00222593     EISSN: 14686244     Source Type: Journal    
DOI: 10.1136/jmedgenet-2016-104054     Document Type: Article
Times cited : (72)

References (50)
  • 1
    • 84966551189 scopus 로고    scopus 로고
    • Mutations causative of familial hypercholesterolaemia: screening of 98 098 individuals from the Copenhagen General Population Study estimated a prevalence of 1 in 217
    • Benn M, Watts GF, Tybjærg-Hansen A, Nordestgaard BG. Mutations causative of familial hypercholesterolaemia: screening of 98 098 individuals from the Copenhagen General Population Study estimated a prevalence of 1 in 217. Eur Heart J 2016;37:1384-94.
    • (2016) Eur Heart J , vol.37 , pp. 1384-1394
    • Benn, M.1    Watts, G.F.2    Tybjærg-Hansen, A.3    Nordestgaard, B.G.4
  • 2
    • 84912105838 scopus 로고    scopus 로고
    • Prevalence and clinical correlates of familial hypercholesterolemia founder mutations in the general population
    • Lahtinen AM, Havulinna AS, Jula A, Salomaa V, Kontula K. Prevalence and clinical correlates of familial hypercholesterolemia founder mutations in the general population. Atherosclerosis 2015;238:64-9.
    • (2015) Atherosclerosis , vol.238 , pp. 64-69
    • Lahtinen, A.M.1    Havulinna, A.S.2    Jula, A.3    Salomaa, V.4    Kontula, K.5
  • 3
    • 11244286076 scopus 로고    scopus 로고
    • Census of clinics providing specialist lipid services in the United Kingdom
    • Marks D, Thorogood M, Farrer JM, Humphries SE. Census of clinics providing specialist lipid services in the United Kingdom. J Public Health 2004;26:353-4.
    • (2004) J Public Health , vol.26 , pp. 353-354
    • Marks, D.1    Thorogood, M.2    Farrer, J.M.3    Humphries, S.E.4
  • 4
    • 55749088063 scopus 로고    scopus 로고
    • Reductions in all-cause, cancer, and coronary mortality in statin-treated patients with heterozygous familial hypercholesterolaemia: a prospective registry study
    • Neil A, Cooper J, Betteridge J, Capps N, McDowell I, Durrington P, Seed M, Humphries SE. Reductions in all-cause, cancer, and coronary mortality in statin-treated patients with heterozygous familial hypercholesterolaemia: a prospective registry study. Eur Heart J 2008;29:2625-33.
    • (2008) Eur Heart J , vol.29 , pp. 2625-2633
    • Neil, A.1    Cooper, J.2    Betteridge, J.3    Capps, N.4    McDowell, I.5    Durrington, P.6    Seed, M.7    Humphries, S.E.8
  • 7
    • 84864579096 scopus 로고    scopus 로고
    • Discriminative ability of LDL-cholesterol to identify patients with familial hypercholesterolemia: a cross-sectional study in 26,406 individuals tested for genetic FH
    • Huijgen R, Hutten BA, Kindt I, Vissers MN, Kastelein JJP. Discriminative ability of LDL-cholesterol to identify patients with familial hypercholesterolemia: a cross-sectional study in 26,406 individuals tested for genetic FH. Circ Cardiovasc Genet 2012;5:354-9.
    • (2012) Circ Cardiovasc Genet , vol.5 , pp. 354-359
    • Huijgen, R.1    Hutten, B.A.2    Kindt, I.3    Vissers, M.N.4    Kastelein, J.J.P.5
  • 8
    • 0032526144 scopus 로고    scopus 로고
    • A World Wide Web site for low-density lipoprotein receptor gene mutations in familial hypercholesterolemia: sequence-based, tabular, and direct submission data handling
    • Wilson DJ, Gahan M, Haddad L, Heath K, Whittall RA, Williams RR, Humphries SE, Day IN. A World Wide Web site for low-density lipoprotein receptor gene mutations in familial hypercholesterolemia: sequence-based, tabular, and direct submission data handling. Am J Cardiol 1998;81:1509-11.
    • (1998) Am J Cardiol , vol.81 , pp. 1509-1511
    • Wilson, D.J.1    Gahan, M.2    Haddad, L.3    Heath, K.4    Whittall, R.A.5    Williams, R.R.6    Humphries, S.E.7    Day, I.N.8
  • 9
    • 0035197537 scopus 로고    scopus 로고
    • Low-density lipoprotein receptor gene (LDLR) world-wide website in familial hypercholesterolaemia: Update, new features and mutation analysis
    • Heath KE, Gahan M, Whittall RA, Humphries SE. Low-density lipoprotein receptor gene (LDLR) world-wide website in familial hypercholesterolaemia: Update, new features and mutation analysis. Atherosclerosis 2001;154:243-6.
    • (2001) Atherosclerosis , vol.154 , pp. 243-246
    • Heath, K.E.1    Gahan, M.2    Whittall, R.A.3    Humphries, S.E.4
  • 10
    • 44849108492 scopus 로고    scopus 로고
    • Update and analysis of the university college London low density lipoprotein receptor familial hypercholesterolemia database
    • Leigh SEA, Foster AH, Whittall RA, Hubbart CS, Humphries SE. Update and analysis of the university college London low density lipoprotein receptor familial hypercholesterolemia database. Ann Hum Genet 2008;72:485-98.
    • (2008) Ann Hum Genet , vol.72 , pp. 485-498
    • Leigh, S.E.A.1    Foster, A.H.2    Whittall, R.A.3    Hubbart, C.S.4    Humphries, S.E.5
  • 13
    • 38149063754 scopus 로고    scopus 로고
    • Improving sequence variant descriptions in mutation databases and literature using the mutalyzer sequence variation nomenclature checker
    • Wildeman M, Van Ophuizen E, Den Dunnen JT, Taschner PEM. Improving sequence variant descriptions in mutation databases and literature using the mutalyzer sequence variation nomenclature checker. Hum Mutat 2008;29:6-13.
    • (2008) Hum Mutat , vol.29 , pp. 6-13
    • Wildeman, M.1    Van Ophuizen, E.2    Den Dunnen, J.T.3    Taschner, P.E.M.4
  • 14
    • 0034908554 scopus 로고    scopus 로고
    • Nomenclature for the description of human sequence variations
    • Den Dunnen JT, Antonarakis E. Nomenclature for the description of human sequence variations. Hum Genet 2001;109:121-4.
    • (2001) Hum Genet , vol.109 , pp. 121-124
    • Den Dunnen, J.T.1    Antonarakis, E.2
  • 17
    • 68149165614 scopus 로고    scopus 로고
    • Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm
    • Kumar P, Henikoff S, Ng PC. Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm. Nat Protoc 2009;4:1073-81.
    • (2009) Nat Protoc , vol.4 , pp. 1073-1081
    • Kumar, P.1    Henikoff, S.2    Ng, P.C.3
  • 18
    • 84897456458 scopus 로고    scopus 로고
    • MutationTaster2: mutation prediction for the deep-sequencing age
    • Schwarz JM, Cooper DN, Schuelke M, Seelow D. MutationTaster2: mutation prediction for the deep-sequencing age. Nat Methods 2014;11:361-2.
    • (2014) Nat Methods , vol.11 , pp. 361-362
    • Schwarz, J.M.1    Cooper, D.N.2    Schuelke, M.3    Seelow, D.4
  • 21
    • 84929266164 scopus 로고    scopus 로고
    • Functional analysis of four LDLR 50UTR and promoter variants in patients with familial hypercholesterolaemia
    • Khamis A, Palmen J, Lench N, Taylor A, Badmus E, Leigh S, Humphries SE. Functional analysis of four LDLR 50UTR and promoter variants in patients with familial hypercholesterolaemia. Eur J Hum Genet 2015;23:790-5.
    • (2015) Eur J Hum Genet , vol.23 , pp. 790-795
    • Khamis, A.1    Palmen, J.2    Lench, N.3    Taylor, A.4    Badmus, E.5    Leigh, S.6    Humphries, S.E.7
  • 24
    • 84879415822 scopus 로고    scopus 로고
    • Analysis of the frequency and spectrum of mutations recognised to cause familial hypercholesterolaemia in routine clinical practice in a UK specialist hospital lipid clinic
    • Futema M, Whittall RA, Kiley A, Steel LK, Cooper JA, Badmus E, Leigh SE, Karpe F, Neil HA, Simon Broome Register Group, Humphries SE. Analysis of the frequency and spectrum of mutations recognised to cause familial hypercholesterolaemia in routine clinical practice in a UK specialist hospital lipid clinic. Atherosclerosis 2013;229:161-8.
    • (2013) Atherosclerosis , vol.229 , pp. 161-168
    • Futema, M.1    Whittall, R.A.2    Kiley, A.3    Steel, L.K.4    Cooper, J.A.5    Badmus, E.6    Leigh, S.E.7    Karpe, F.8    Neil, H.A.9    Humphries, S.E.10
  • 25
    • 0027026881 scopus 로고
    • Molecular genetics of the LDL receptor gene in familial hypercholesterolemia
    • Hobbs HH, Brown MS, Goldstein JL. Molecular genetics of the LDL receptor gene in familial hypercholesterolemia. Hum Mutat 1992;1:445-66.
    • (1992) Hum Mutat , vol.1 , pp. 445-466
    • Hobbs, H.H.1    Brown, M.S.2    Goldstein, J.L.3
  • 26
    • 84941337248 scopus 로고    scopus 로고
    • The importance of an integrated analysis of clinical, molecular, and functional data for the genetic diagnosis of familial hypercholesterolemia
    • Benito-Vicente A, Alves AC, Etxebarria A, Medeiros AM, Martin C, Bourbon M. The importance of an integrated analysis of clinical, molecular, and functional data for the genetic diagnosis of familial hypercholesterolemia. Genet Med 2015;17:980-8.
    • (2015) Genet Med , vol.17 , pp. 980-988
    • Benito-Vicente, A.1    Alves, A.C.2    Etxebarria, A.3    Medeiros, A.M.4    Martin, C.5    Bourbon, M.6
  • 28
    • 0030754197 scopus 로고    scopus 로고
    • Familial moderate hypercholesterolemia caused by Asp235->Glu mutation of the LDL receptor gene and co-occurrence of a de novo deletion of the LDL receptor gene in the same family
    • Koivisto UM, Gylling H, Miettinen TA, Kontula K. Familial moderate hypercholesterolemia caused by Asp235->Glu mutation of the LDL receptor gene and co-occurrence of a de novo deletion of the LDL receptor gene in the same family. Arterioscler Thromb Vasc Biol 1997;17:1392-9.
    • (1997) Arterioscler Thromb Vasc Biol , vol.17 , pp. 1392-1399
    • Koivisto, U.M.1    Gylling, H.2    Miettinen, T.A.3    Kontula, K.4
  • 34
    • 66249138829 scopus 로고    scopus 로고
    • Genetic diagnosis of familial hypercholesterolaemia: the importance of functional analysis of potential splice-site mutations
    • Bourbon M, Duarte MA, Alves AC, Medeiros AM, Marques L, Soutar AK. Genetic diagnosis of familial hypercholesterolaemia: the importance of functional analysis of potential splice-site mutations. J Med Genet 2009;46:352-7.
    • (2009) J Med Genet , vol.46 , pp. 352-357
    • Bourbon, M.1    Duarte, M.A.2    Alves, A.C.3    Medeiros, A.M.4    Marques, L.5    Soutar, A.K.6
  • 36
    • 17444433890 scopus 로고    scopus 로고
    • LDL receptor cDNA sequence analysis in familial hypercholesterolemia patients: 5 novel mutations with high prevalence in families originating from southern Italy
    • Liguori R, Bianco AM, Argiriou A, Pauciullo P, Giannino A, Rubba P, De Simone V. LDL receptor cDNA sequence analysis in familial hypercholesterolemia patients: 5 novel mutations with high prevalence in families originating from southern Italy. Hum Mutat 2001;17:433.
    • (2001) Hum Mutat , vol.17 , pp. 433
    • Liguori, R.1    Bianco, A.M.2    Argiriou, A.3    Pauciullo, P.4    Giannino, A.5    Rubba, P.6    De Simone, V.7
  • 38
    • 84935882635 scopus 로고    scopus 로고
    • Identification of the gene defect responsible for severe hypercholesterolaemia using whole-exome sequencing
    • Sun LY, Zhang YB, Jiang L, Wan N, Wu W-F, Pan X-D, Yu J, Zhang F, Wang L-Y. Identification of the gene defect responsible for severe hypercholesterolaemia using whole-exome sequencing. Sci Rep 2015;5:11380.
    • (2015) Sci Rep , vol.5 , pp. 11380
    • Sun, L.Y.1    Zhang, Y.B.2    Jiang, L.3    Wan, N.4    Wu, W.-F.5    Pan, X.-D.6    Yu, J.7    Zhang, F.8    Wang, L.-Y.9
  • 39
    • 0029788884 scopus 로고    scopus 로고
    • Genetic variation at a splicing branch point in intron 9 of the low density lipoprotein (LDL)-receptor gene: a rare mutation that disrupts mRNA splicing in a patient with familial hypercholesterolaemia and a common polymorphism
    • Webb JC, Patel DD, Shoulders CC, Knight BL, Soutar AK. Genetic variation at a splicing branch point in intron 9 of the low density lipoprotein (LDL)-receptor gene: a rare mutation that disrupts mRNA splicing in a patient with familial hypercholesterolaemia and a common polymorphism. Hum Mol Genet 1996;5:1325-31.
    • (1996) Hum Mol Genet , vol.5 , pp. 1325-1331
    • Webb, J.C.1    Patel, D.D.2    Shoulders, C.C.3    Knight, B.L.4    Soutar, A.K.5
  • 42
    • 78049258389 scopus 로고    scopus 로고
    • Analysis of LDLR mRNA in patients with familial hypercholesterolemia revealed a novel mutation in intron 14, which activates a cryptic splice site
    • Kulseth MA, Berge KE, Bogsrud MP, Leren TP. Analysis of LDLR mRNA in patients with familial hypercholesterolemia revealed a novel mutation in intron 14, which activates a cryptic splice site. J Hum Genet 2010;55:676-80.
    • (2010) J Hum Genet , vol.55 , pp. 676-680
    • Kulseth, M.A.1    Berge, K.E.2    Bogsrud, M.P.3    Leren, T.P.4
  • 43
    • 43449107670 scopus 로고    scopus 로고
    • Silent exonic mutations in the low-density lipoprotein receptor gene that cause familial hypercholesterolemia by affecting mRNA splicing
    • Defesche JC, Schuurman EJM, Klaaijsen LN, Khoo KL, Wiegman A, Stalenhoef AFH. Silent exonic mutations in the low-density lipoprotein receptor gene that cause familial hypercholesterolemia by affecting mRNA splicing. Clin Genet 2008;73:573-8.
    • (2008) Clin Genet , vol.73 , pp. 573-578
    • Defesche, J.C.1    Schuurman, E.J.M.2    Klaaijsen, L.N.3    Khoo, K.L.4    Wiegman, A.5    Stalenhoef, A.F.H.6
  • 44
    • 84945193460 scopus 로고    scopus 로고
    • LDLR gene synonymous mutation c.1813C>T results in mRNA splicing variation in a kindred with familial hypercholesterolaemia
    • Ho CKM, Musa FR, Bell C, Walker SW. LDLR gene synonymous mutation c.1813C>T results in mRNA splicing variation in a kindred with familial hypercholesterolaemia. Ann Clin Biochem 2015;52(Pt 6):680-4.
    • (2015) Ann Clin Biochem , vol.52 , pp. 680-684
    • Ho, C.K.M.1    Musa, F.R.2    Bell, C.3    Walker, S.W.4
  • 46
    • 0027054380 scopus 로고
    • Features of spliceosome evolution and function inferred from an analysis of the information at human splice sites
    • Stephens RM, Schneider TD. Features of spliceosome evolution and function inferred from an analysis of the information at human splice sites. J Mol Biol 1992;228:1124-36.
    • (1992) J Mol Biol , vol.228 , pp. 1124-1136
    • Stephens, R.M.1    Schneider, T.D.2
  • 47
    • 84960495405 scopus 로고    scopus 로고
    • Functional characterization of mutant genes associated with autosomal dominant familial hypercholesterolemia: integration and evolution of genetic diagnosis
    • Di Taranto MD, D'Agostino MN, Fortunato G. Functional characterization of mutant genes associated with autosomal dominant familial hypercholesterolemia: integration and evolution of genetic diagnosis. Nutr Metab Cardiovasc Dis 2015;25:979-87.
    • (2015) Nutr Metab Cardiovasc Dis , vol.25 , pp. 979-987
    • Di Taranto, M.D.1    D'Agostino, M.N.2    Fortunato, G.3
  • 48
    • 0035370002 scopus 로고    scopus 로고
    • A novel cellular phenotype for familial hypercholesterolemia due to a defect in polarized targeting of LDL receptor
    • Koivisto U-M, Hubbard AL, Mellman I. A novel cellular phenotype for familial hypercholesterolemia due to a defect in polarized targeting of LDL receptor. Cell 2001;105:575-85.
    • (2001) Cell , vol.105 , pp. 575-585
    • Koivisto, U.-M.1    Hubbard, A.L.2    Mellman, I.3
  • 49
    • 84897935750 scopus 로고    scopus 로고
    • Mutation G805R in the transmembrane domain of the LDL receptor gene causes familial hypercholesterolemia by inducing ectodomain cleavage of the LDL receptor in the endoplasmic reticulum
    • Strøm TB, Tveten K, Laerdahl JK, Leren TP. Mutation G805R in the transmembrane domain of the LDL receptor gene causes familial hypercholesterolemia by inducing ectodomain cleavage of the LDL receptor in the endoplasmic reticulum. FEBS Open Biol 2014;4:321-7.
    • (2014) FEBS Open Biol , vol.4 , pp. 321-327
    • Strøm, T.B.1    Tveten, K.2    Laerdahl, J.K.3    Leren, T.P.4
  • 50
    • 84943740403 scopus 로고    scopus 로고
    • Mutation p.L799R in the LDLR, which affects the transmembrane domain of the LDLR, prevents membrane insertion and causes secretion of the mutant LDLR
    • Strøm TB, Laerdahl JK, Leren TP. Mutation p.L799R in the LDLR, which affects the transmembrane domain of the LDLR, prevents membrane insertion and causes secretion of the mutant LDLR. Hum Mol Genet 2015;24: 5836-44.
    • (2015) Hum Mol Genet , vol.24 , pp. 5836-5844
    • Strøm, T.B.1    Laerdahl, J.K.2    Leren, T.P.3


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