RNA Sequence Context Effects Measured In Vitro Predict In Vivo Protein Binding and Regulation

Molecular Cell

Volumn 64, Issue 2, 2016, Pages 294-306

  Taliaferro, J Matthew ^a   Lambert, Nicole J ^a   Sudmant, Peter H ^a   Dominguez, Daniel ^a   Merkin, Jason J ^a   Alexis, Maria S ^a   Bazile, Cassandra A ^a   Burge, Christopher B ^a  

^a MASSACHUSETTS INSTITUTE OF TECHNOLOGY   (United States)

Author keywords

post transcriptional; RBNS; RNA processing

Indexed keywords

RNA BINDING PROTEIN; DNA BINDING PROTEIN; MBNL1 PROTEIN, MOUSE; PROTEIN BINDING; RBFOX2 PROTEIN, MOUSE; RNA; RNA SPLICING FACTOR;

ALTERNATIVE RNA SPLICING; ARTICLE; BINDING ASSAY; EXON; IN VITRO STUDY; IN VIVO STUDY; INTRON; MUTAGENESIS; NONHUMAN; PROTEIN BINDING; PROTEIN SECONDARY STRUCTURE; RNA PROCESSING; RNA SEQUENCE; ALGORITHM; ANIMAL; BINDING SITE; BOVINE; CELL DIFFERENTIATION; CHEMISTRY; CONFORMATION; CYTOLOGY; FIBROBLAST; GENE EXPRESSION; GENETICS; KNOCKOUT MOUSE; MACACA; METABOLISM; MOUSE; MOUSE EMBRYONIC STEM CELL; MUTATION; NERVE CELL; NUCLEOTIDE MOTIF; PROTEIN DOMAIN; RAT; SOFTWARE;

ALGORITHMS; ALTERNATIVE SPLICING; ANIMALS; BINDING SITES; CATTLE; CELL DIFFERENTIATION; DNA-BINDING PROTEINS; FIBROBLASTS; GENE EXPRESSION; MACACA; MICE; MICE, KNOCKOUT; MOUSE EMBRYONIC STEM CELLS; MUTATION; NEURONS; NUCLEIC ACID CONFORMATION; NUCLEOTIDE MOTIFS; PROTEIN BINDING; PROTEIN INTERACTION DOMAINS AND MOTIFS; RATS; RNA; RNA SPLICING FACTORS; RNA-BINDING PROTEINS; SOFTWARE;

EID: 84992153620     PISSN: 10972765     EISSN: 10974164     Source Type: Journal    
DOI: 10.1016/j.molcel.2016.08.035     Document Type: Article

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