Disrupting ER-associated protein degradation suppresses the abscission defect of a weak hae hsl2 mutant in Arabidopsis

Journal of Experimental Botany

Volumn 67, Issue 18, 2016, Pages 5473-5484

  Baer, John ^a   Taylor, Isaiah ^a   Walker, John C ^a  

^a UNIVERSITY OF MISSOURI   (United States)

Author keywords

Abscission; EBS3; EBS4; ER associated degradation; ERAD; genome sequencing; HAESA; HAESA LIKE 2; suppressor

Indexed keywords

ARABIDOPSIS PROTEIN; HSL2 PROTEIN, ARABIDOPSIS; MANNOSYLTRANSFERASE; PLANT PROTEIN; PROTEIN SERINE THREONINE KINASE; RLK5 PROTEIN, ARABIDOPSIS;

ARABIDOPSIS; DNA SEQUENCE; ENDOPLASMIC RETICULUM; FLOWER; GENETICS; METABOLISM; MUTATION; PHYSIOLOGY;

ARABIDOPSIS; ARABIDOPSIS PROTEINS; ENDOPLASMIC RETICULUM; FLOWERS; MANNOSYLTRANSFERASES; MUTATION; PLANT PROTEINS; PROTEIN-SERINE-THREONINE KINASES; SEQUENCE ANALYSIS, DNA;

EID: 84991373060     PISSN: 00220957     EISSN: 14602431     Source Type: Journal    
DOI: 10.1093/jxb/erw313     Document Type: Article

References (28)

1. Allen RS, Nakasugi K, Doran RL, Millar AA, Waterhouse PM. 2013. Facile mutant identification via a single parental backcross method and application of whole genome sequencing based mapping pipelines. Frontiers in Plant Science 4, 362.
2. Alvarez-Buylla ER, Benítez M, Corvera-Poiré A, et al. 2010. Flower development. Arabidopsis Book 8, e0127.
3. Butenko MA, Patterson SE, Grini PE, Stenvik G-E, Amundsen SS, Mandal A, Aalen RB. 2003. Inflorescence deficient in abscission controls floral organ abscission in Arabidopsis and identifies a novel family of putative ligands in plants. The Plant Cell 15, 2296-2307.
4. Butenko MA, Wildhagen M, Albert M, Jehle A, Kalbacher H, Aalen RB, Felix G. 2014. Tools and strategies to match peptide-ligand receptor pairs. The Plant Cell 26, 1838-1847.
5. Cho SK, Larue CT, Chevalier D, Wang H, Jinn T-L, Zhang S, Walker JC. 2008. Regulation of floral organ abscission in Arabidopsis thaliana. Proceedings of the National Academy of Sciences, USA 105, 15629-15634.
6. Clerc S, Hirsch C, Oggier DM, Deprez P, Jakob C, Sommer T, Aebi M. 2009. Htm1 protein generates the N-glycan signal for glycoprotein degradation in the endoplasmic reticulum. Journal of Cell Biology 184, 159-172.
7. Clough SJ, Bent AF. 1998. Floral dip: A simplified method forAgrobacterium-mediated transformation of Arabidopsis thaliana. The Plant Journal 16, 735-743.
8. Dubin MJ, Bowler C, Benvenuto G. 2008. A modified Gateway cloning strategy for overexpressing tagged proteins in plants. Plant Methods 4, 3.
9. Dunn OJ. 2012. Multiple comparisons among means. Journal of the American Statistical Association 56, 52-64.
10. Hong Z, Jin H, Fitchette A-C, Xia Y, Monk AM, Faye L, Li J. 2009. Mutations of an alpha1, 6 mannosyltransferase inhibit endoplasmic reticulum-associated degradation of defective brassinosteroid receptors in Arabidopsis. The Plant Cell 21, 3792-3802.
11. Hong Z, Kajiura H, Su W, Jin H, Kimura A, Fujiyama K, Li J. 2012. Evolutionarily conserved glycan signal to degrade aberrant brassinosteroid receptors in Arabidopsis. Proceedings of the National Academy of Sciences, USA 109, 11437-11442.
12. Jin H, Hong Z, Su W, Li J. 2009. A plant-specific calreticulin is a key retention factor for a defective brassinosteroid receptor in the endoplasmic reticulum. Proceedings of the National Academy of Sciences, USA 106, 13612-13617.
13. Jin H, Yan Z, Nam KH, Li J. 2007. Allele-specific suppression of a defective brassinosteroid receptor reveals a physiological role of UGGT in ER quality control. Molecular Cell 26, 821-830.
14. Langmead B, Salzberg SL. 2012. Fast gapped-read alignment with Bowtie 2. Nature Methods 9, 357-359.
15. Lannoo N, Van Damme EJM. 2015. Review/N-glycans: The making of a varied toolbox. Plant Science 239, 67-83.
16. Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R. 2009. The Sequence Alignment/Map format and SAMtools. Bioinformatics 25, 2078-2079.
17. Liu Y, Li J. 2014. Endoplasmic reticulum-mediated protein quality control in Arabidopsis. Frontiers in Plant Science 5, 162.
18. Meng X, Zhou J, Tang J, Li B, de Oliveira MV, Chai J, He P, Shan L. 2016. Ligand-induced receptor-like kinase complex regulates floral organ abscission in Arabidopsis. Cell Reports 14, 1330-1338.
19. Nakamura S, Mano S, Tanaka Y, et al. 2010. Gateway binary vectors with the bialaphos resistance gene, bar, as a selection marker for plant transformation. Bioscience, Biotechnology, and Biochemistry 74, 1315-1319.
20. Niederhuth CE, Cho SK, Seitz K, Walker JC. 2013a. Letting go is never easy: Abscission and receptor-like protein kinases. Journal of Integrative Plant Biology 55, 1251-1263.
21. Niederhuth CE, Patharkar OR, Walker JC. 2013b. Transcriptional profiling of the Arabidopsis abscission mutant hae hsl2 by RNA-Seq. BMC Genomics 14, 37.
22. Patharkar OR, Walker JC. 2015. Floral organ abscission is regulated by a positive feedback loop. Proceedings of the National Academy of Sciences, USA 112, 2906-2911.
23. Roeder AHK, Yanofsky MF. 2006. Fruit development in Arabidopsis. Arabidopsis Book 4, e0075.
24. Santiago J, Brandt B, Wildhagen M, Hohmann U, Hothorn LA, Butenko MA, Hothorn M. 2016. Mechanistic insight into a peptide hormone signaling complex mediating floral organ abscission. eLife 5.
25. Schneider CA, Rasband WS, Eliceiri KW. 2012. NIH Image to ImageJ: 25 years of image analysis. Nature Methods 9, 671-675.
26. Stenvik G-E, Tandstad NM, Guo Y, Shi C-L, Kristiansen W, Holmgren A, Clark SE, Aalen RB, Butenko MA. 2008. The EPIP peptide of INFLORESCENCE DEFICIENT IN ABSCISSION is sufficient to induce abscission in arabidopsis through the receptor-like kinases HAESA and HAESA-LIKE2. The Plant Cell 20, 1805-1817.
27. Taylor I, Wang Y, Seitz K, et al. 2016. Analysis of phosphorylation of the receptor-like protein kinase HAESA during Arabidopsis floral abscission. PLoS One 11, e0147203.
28. Weigel D, Glazebrook J. 2006. EMS mutagenesis of Arabidopsis seed. CSH Protocols 2006, pdb. prot4621.