A regenerative ratiometric electrochemical biosensor for selective detecting Hg2+ based on Y-shaped/hairpin DNA transformation

Analytica Chimica Acta

Volumn 908, Issue , 2016, Pages 95-101

  Jia, Jing ^a   Chen, Hong Guo ^a   Feng, Ji ^a   Lei, Jing Lei ^b   Luo, Hong Qun ^a   Li, Nian Bing ^a  

^a SOUTHWEST UNIVERSITY   (China)

^b CHONGQING UNIVERSITY   (China)

Author keywords

Mercury ion; Ratiometric biosensor; Regeneration; Square wave voltammetry; Y shaped DNA

Indexed keywords

AMINO ACIDS; AROMATIC COMPOUNDS; BIOMOLECULES; BIOSENSORS; DNA; ELECTRODES; IONS; MERCURY (METAL); ORGANOMETALLICS; VOLTAMMETRY;

MERCURY ION; RATIOMETRIC; REGENERATION; SQUARE WAVE VOLTAMMETRY; Y-SHAPED;

SIGNAL DETECTION;

ALUMINUM; BARIUM ION; CADMIUM; CHROMIUM; COBALT; COPPER ION; DNA; FERROCENE; HAIRPIN DNA; IRON; LEAD; MAGNESIUM ION; MERCURY; METHYLENE BLUE; NICKEL; UNCLASSIFIED DRUG; Y DNA; ZINC ION;

ARTICLE; BIOSENSOR; COMPLEX FORMATION; CONTROLLED STUDY; DNA STRUCTURE; ELECTRODE; GENETIC TRANSFORMATION; HYBRIDIZATION; IMMOBILIZATION; LIMIT OF DETECTION; MOLECULAR PROBE; PRIORITY JOURNAL; RATIOMETRIC BIOSENSOR; CHEMISTRY; CONFORMATION; DEVICES; ELECTROCHEMICAL ANALYSIS; GENETIC PROCEDURES; REPRODUCIBILITY;

BIOSENSING TECHNIQUES; DNA; ELECTROCHEMICAL TECHNIQUES; LIMIT OF DETECTION; MERCURY; NUCLEIC ACID CONFORMATION; REPRODUCIBILITY OF RESULTS;

EID: 84989788864     PISSN: 00032670     EISSN: 18734324     Source Type: Journal    
DOI: 10.1016/j.aca.2015.12.028     Document Type: Article

References (40)

1. Tchounwou P.B., Ayensu W.K., Ninashvili N., Sutton D. Environmental exposure to mercury and its toxicopathologic implications for public health. Inc. Environ. Toxicol. 2003, 18:149-175.
2. Gochfeld M. Cases of mercury exposure, bioavailability, and absorption. Ecotoxicol. Environ. Saf. 2003, 56:174-179.
3. Zahir F., Rizwi S.J., Haq S.K., Khan R.H. Low dose mercury toxicity and human health. Environ. Toxicol. Pharmacol. 2005, 20:351-360.
4. Magos L., Clarkson T.W. Overview of the clinical toxicity of mercury. Ann. Clin. Biochem. 2006, 43:257-268.
5. Chen D.M., Gao Z.F., Jia J., Li N.B., Luo H.Q. A sensitive and selective electrochemical biosensor for detection of mercury(II) ions based on nicking endonuclease-assisted signal amplification. Sens. Actuat. B 2015, 210:290-296.
6. Madden J.T., Fitzgerald N. Investigation of ultraviolet photolysis vapor generation with in-atomizer trapping graphite furnace atomic absorption spectrometry for the determination of mercury. Spectrochim. Acta Part B 2009, 64:925-927.
7. Zhu X.P., Alexandratos S.D. Determination of trace levels of mercury in aqueous solutions by inductively coupled plasma atomic emission spectrometry: elimination of the 'memory effect'. Microchem. J. 2007, 86:37-41.
8. Malinovsky D., Sturgeon R.E., Yang L. Anion-exchange chromatographic separation of Hg for isotope ratio measurements by multicollector ICPMS. Anal. Chem. 2008, 80:2548-2555.
9. Han F.X., Patterson W.D., Xia Y.J., Sridhar B.B.M., Su Y. Rapid determination of mercury in plant and soil samples using inductively coupled plasma atomic emission spectroscopy, a comparative study. Water Air. Soil. Pollut. 2006, 170:161-171.
10. Silva M.J.d., Paim A.P.S., Pimentel M.F., Cervera M.L., Guardia M.d.l. Determination of mercury in rice by cold vapor atomic fluorescence spectrometry after microwave-assisted digestion. Anal. Chim. Acta 2010, 667:43-48.
11. 2+) by magnetic beads-based electrochemiluminescence assay. Biosens. Bioelectron. 2010, 26:859-862.
12. 2+-thymine structure. Anal. Chim. Acta 2015, 853:242-248.
13. Chen J.R., Jiao X.X., Luo H.Q., Li N.B. Probe-label-free electrochemical aptasensor based on methylene blue-anchored graphene oxide amplification. J. Mater. Chem. B 2013, 1:861-864.
14. Xue Q.W., Lv Y.Q., Cui H., Gu X.H., Zhang S.Q., Liu J.F. A DNA nanomachine based on rolling circle amplification-bridged two-stage exonuclease III-assisted recycling strategy for label-free multi-amplified biosensing of nucleic acid. Anal. Chim. Acta 2015, 856:103-109.
15. Chai X.L., Zhang L.M., Tian Y. Ratiometric electrochemical sensor for selective monitoring of cadmium ions using ions molecular recognition. Anal. Chem. 2014, 86:10668-10673.
16. Miyake Y., Togashi H., Tashiro M., Yamaguchi H., Oda S., Kudo M., Tanaka Y., Kondo Y., Sawa R., Fujimoto T., Machinami T., Ono A. MercuryII-mediated formation of thymine-HgII-thymine base pairs in DNA duplexes. J. Am. Chem. Soc. 2006, 128:2172-2173.
17. Gao F.L., Qian Y., Zhang L., Dai S.Z., Lan Y.F., Zhang Y., Du L.L., Tang D.Q. Target catalyzed hairpin assembly for constructing a ratiometric electrochemical aptasensor. Biosens. Bioelectron. 2015, 71:158-163.
18. Yu Z.G., Lai R.Y. A reagentless and reusable electrochemical DNA sensor based on target hybridization-induced stem-loop probe formation. Chem. Commun. 2012, 48:10523-10525.
19. Zuo X.L., Xiao Y., Plaxco K.W. High specificity, electrochemical sandwich assays based on single aptamer sequences and suitable for the direct detection of small-molecule targets in blood and other complex matrices. J. Am. Chem. Soc. 2009, 131:6944-6945.
20. Deng J.J., Yu P., Wang Y.X., Mao L.Q. Real-time ratiometric fluorescent assay for alkaline phosphatase activity with stimulus responsive infinite coordination polymer nanoparticles. Anal. Chem. 2015, 87:3080-3086.
21. Wu L., Zhang X.H., Liu W., Xiong E.H., Chen J.H. Sensitive electrochemical aptasensor by coupling "signal-on'' and "signal-off" strategies. Anal. Chem. 2013, 85:8397-8402.
22. Zhu G.B., Wu L., Zhang X., Liu W., Zhang X.H., Chen J.H. A new dual-signaling electrochemical sensing strategy based on competitive host-guest interaction of a,b-cyclodextrin/poly(nacetylaniline)/graphene-modified electrode: sensitive electrochemical determination of organic pollutants. Chem. Eur. J. 2013, 19:6368-6373.
23. Ren K.W., Wu J., Yan F., Ju H.X. Ratiometric electrochemical proximity assay for sensitive one-step protein detection. Sci. Rep. 2014, 4:4360.
24. Ren K.W., Wu J., Yan F., Zhang Y., Ju H.X. Immunoreaction-triggered DNA assembly for one-step sensitive ratiometric electrochemical biosensing of protein biomarker. Biosens. Bioelectron. 2015, 66:345-349.
25. He P.L., Shen L., Cao Y.H., Li D.F. Ultrasensitive electrochemical detection of proteins by amplification of aptamer-nanoparticle bio bar codes. Anal. Chem. 2007, 79:8024-8029.
26. Wei X.F., Lin W.L., Ma N., Luo F., Lin Z.Y., Guo L.H., Qiu B., Chen G.N. Sensitive fluorescence biosensor for folate receptor based on terminal protection of small-molecule-linked DNA. Chem. Commun. 2012, 48:6184-6186.
27. Haider S.M., Parkinson G.N., Neidle S. Structure of a G-quadruplex-ligand complex. J. Mol. Biol. 2003, 326:117-125.
28. Li C., Wang Z.Y., Gao T., Duan A.P., Li G.X. Fabrication of hand-in-hand nanostructure for one-step protein detection. Chem. Commun. 2013, 49:3760-3762.
29. Kurahashi H., Inagaki H., Yamada K., Ohye T., Taniguchi M., Emanuel B.S., Toda T. Cruciform DNA structure underlies the etiology for palindrome-mediated human chromosomal translocations. J. Biol. Chem. 2004, 279:35377-35383.
30. Afonin1 K.A., Lin Y.P., Calkins1 E.R., Jaeger L. Attenuation of loop-receptor interactions with pseudoknot formation. Nucl. Acids Res. 2012, 40:2168-2180.
31. Cheng E.J., Xing Y.Z., Chen P., Yang Y., Sun Y.W., Zhou D.J., Xu L.J., Fan Q.H., Liu D.S. A pH-triggered, fast-responding DNA hydrogel. Angew. Chem. 2009, 121:7796-7799.
32. Roh Y.H., Ruiz R.C.H., Peng S.M., Lee J.B., Luo D. Engineering DNA-based functional materials. Chem. Soc. Rev. 2011, 40:5730-5744.
33. Chatterjee S., Lee J.B., Valappil N.V., Luo D., Menon V.M. Probing Y-shaped DNA structure with time-resolved FRET. Nanoscale 2012, 4:1568-1571.
34. Zhang J., Chen J.H., Chen R.C., Chen G.N., Fu F.F. Sequence-specific detection of trace DNA via a junction-probe electrochemical sensor employed template-enhanced hybridization strategy. Biosens. Bioelectron. 2009, 25:815-819.
35. Zhang J., Wu X.Y., Chen P.P., Lin N.T., Chen J.H., Chen G.N., Fu F.F. Electrochemical genotyping and detection of single-nucleotide polymorphisms based on junction-probe containing 2'-deoxyinosine. Chem. Commun. 2010, 46:6986-6988.
36. 2+ induced by ultraviolet light. Nanotechnology 2010, 21:025501.
37. Zhang Y.Q., Gao L.J., Wen L.P., Heng L.P., Song Y.L. Highly sensitive, selective and reusable mercury(II) ion sensor based on a ssDNA-functionalized photonic crystal film. Phys. Chem. Chem. Phys. 2013, 15:11943-11949.
38. Wu D.H., Zhang Q., Chu X., Wang H.B., Shen G.L., Yu R.Q. Ultrasensitive electrochemical sensor for mercury (II) based on target-induced structure-switching DNA. Biosens. Bioelectron. 2010, 25:1025-1031.
39. 2+. Anal. Chem. 2011, 83:6896-6901.
40. Han D., Kim Y.-R., Oh J.-W., Kim T.H., Mahajan R.K., Kim J.S., Kim H. A regenerative electrochemical sensor based on oligonucleotide for the elective determination of mercury(II). Analyst 2009, 134:1857-1862.