-
1
-
-
78651302604
-
The BRENDA Tissue Ontology (BTO): The first all-integrating ontology of all organisms for enzyme sources
-
Gremse, M., Chang, A., Schomburg, I., Grote, A., Scheer, M., Ebeling, C., and Schomburg, D. 2011. The BRENDA Tissue Ontology (BTO): The first all-integrating ontology of all organisms for enzyme sources. Nucl. Acids Res. 39:D507-D513. doi: 10.1093/nar/ gkq968.
-
(2011)
Nucl. Acids Res.
, vol.39
, pp. D507-D513
-
-
Gremse, M.1
Chang, A.2
Schomburg, I.3
Grote, A.4
Scheer, M.5
Ebeling, C.6
Schomburg, D.7
-
2
-
-
84876560358
-
The ChEBI reference database and ontology for biologically relevant chemistry: Enhancements for 2013
-
Hastings, J., de Matos, P., Dekker, A., Ennis, M., Harsha, B., Kale, N.,Muthukrishnan, V., Owen, G., Turner, S., Williams, M., and Steinbeck, C. 2013. The ChEBI reference database and ontology for biologically relevant chemistry: Enhancements for 2013. Nucl. Acids Res. 41:D456-D463. doi: 10.1093/nar/gks1146.
-
(2013)
Nucl. Acids Res.
, vol.41
, pp. D456-D463
-
-
Hastings, J.1
de Matos, P.2
Dekker, A.3
Ennis, M.4
Harsha, B.5
Kale, N.6
Muthukrishnan, V.7
Owen, G.8
Turner, S.9
Williams, M.10
Steinbeck, C.11
-
3
-
-
84876560030
-
MetaboLights-an open-access general-purpose repository for metabolomics studies and associated meta-data
-
Haug, K., Salek, R.M., Conesa, P., Hastings, J., de Matos, P., Rijnbeek, M., Mahendraker, T., Williams, M., Neumann, S., Rocca-Serra, P., Maguire, E., González-Beltrán, A., Sansone, S.A., Griffin, J.L., and Steinbeck, C. 2013. MetaboLights-an open-access general-purpose repository for metabolomics studies and associated meta-data. Nucl. Acids Res. 41:D781-D786. doi: 10.1093/nar/gks1004.
-
(2013)
Nucl. Acids Res.
, vol.41
, pp. D781-D786
-
-
Haug, K.1
Salek, R.M.2
Conesa, P.3
Hastings, J.4
de Matos, P.5
Rijnbeek, M.6
Mahendraker, T.7
Williams, M.8
Neumann, S.9
Rocca-Serra, P.10
Maguire, E.11
González-Beltrán, A.12
Sansone, S.A.13
Griffin, J.L.14
Steinbeck, C.15
-
4
-
-
77954439868
-
MassBank:A public repository for sharing mass spectral data for life sciences
-
Horai, H., Arita, M., Kanaya, S., Nihei, Y., Ikeda, T., Suwa, K., Ojima, Y., Tanaka, K., Tanaka, S., Aoshima, K., Oda, Y, Kakazu, Y., Kusano, M., Tohge, T., Matsuda, F., Sawada, Y., Hirai, M.Y., Nakanishi, H., Ikeda, K., Akimoto, N., Maoka, T., Takahashi, H., Ara, T., Sakurai, N., Suzuki, H., Shibata, D., Neumann, S., Iida, T., Tanaka, K., Funatsu, K.,Matsuura, F., Soga, T., Taguchi, R., Saito, K., and Nishioka, T. 2010. MassBank:A public repository for sharing mass spectral data for life sciences. J. Mass Spectrom. 45:703-714. doi: 10.1002/jms.1777.
-
(2010)
J. Mass Spectrom.
, vol.45
, pp. 703-714
-
-
Horai, H.1
Arita, M.2
Kanaya, S.3
Nihei, Y.4
Ikeda, T.5
Suwa, K.6
Ojima, Y.7
Tanaka, K.8
Tanaka, S.9
Aoshima, K.10
Oda, Y.11
Kakazu, Y.12
Kusano, M.13
Tohge, T.14
Matsuda, F.15
Sawada, Y.16
Hirai, M.Y.17
Nakanishi, H.18
Ikeda, K.19
Akimoto, N.20
Maoka, T.21
Takahashi, H.22
Ara, T.23
Sakurai, N.24
Suzuki, H.25
Shibata, D.26
Neumann, S.27
Iida, T.28
Tanaka, K.29
Funatsu, K.30
Matsuura, F.31
Soga, T.32
Taguchi, R.33
Saito, K.34
Nishioka, T.35
more..
-
5
-
-
84855888813
-
Birmingham Metabolite Library: A publicly accessible database of 1-D 1H and 2-D 1H Jresolved NMR spectra of authentic metabolite standards (BML-NMR)
-
Ludwig, C., Easton, J.M., Lodi, A., Tiziani, S., Manzoor, S.E, Southam, A.D., Byrne, J.J., Bishop, L.M., He, S., Arvanitis, T.N., Günther, U.L., and Viant, M.R. 2012. Birmingham Metabolite Library: A publicly accessible database of 1-D 1H and 2-D 1H Jresolved NMR spectra of authentic metabolite standards (BML-NMR). Metabolomics 8:8-18. doi: 10.1007/s11306-011-0347-7.
-
(2012)
Metabolomics
, vol.8
, pp. 8-18
-
-
Ludwig, C.1
Easton, J.M.2
Lodi, A.3
Tiziani, S.4
Manzoor, S.E.5
Southam, A.D.6
Byrne, J.J.7
Bishop, L.M.8
He, S.9
Arvanitis, T.N.10
Günther, U.L.11
Viant, M.R.12
-
6
-
-
84941097826
-
Updates in Rhea-a manually curated resource of biochemical reactions
-
Morgat, A., Axelsen, K.B., Lombardot, T., Alcántara, R., Aimo, L., Zerara, M., Niknejad, A., Belda, E., Hyka-Nouspikel, N., Coudert, E., Redaschi, N., Bougueleret, L., Steinbeck, C., Xenarios, I., and Bridge, A. 2015. Updates in Rhea-a manually curated resource of biochemical reactions. Nucl. Acids Res. 43:D459-D64. doi: 10.1093/nar/gku961.
-
(2015)
Nucl. Acids Res.
, vol.43
, pp. D459-D464
-
-
Morgat, A.1
Axelsen, K.B.2
Lombardot, T.3
Alcántara, R.4
Aimo, L.5
Zerara, M.6
Niknejad, A.7
Belda, E.8
Hyka-Nouspikel, N.9
Coudert, E.10
Redaschi, N.11
Bougueleret, L.12
Steinbeck, C.13
Xenarios, I.14
Bridge, A.15
-
7
-
-
84858790233
-
Innovation:Metabolomics: The apogee of the omics trilogy
-
Patti, G.J., Yanes O., and Siuzdak G. 2012. Innovation:Metabolomics: The apogee of the omics trilogy. Nat. Rev. Mol. Cell Biol. 13:263-269. doi: 10.1038/nrm3314.
-
(2012)
Nat. Rev. Mol. Cell Biol.
, vol.13
, pp. 263-269
-
-
Patti, G.J.1
Yanes, O.2
Siuzdak, G.3
-
8
-
-
77956548952
-
ISA software suite: Supporting standards-compliant experimental annotation and enabling curation at the community level
-
Rocca-Serra, P., Brandizi, M., Maguire, E., Sklyar, N., Taylor, C., Begley, K., Field, D., Harris, S., Hide, W., Hofmann, O., Neumann, S., Sterk, P., Tong, W., and Sansone, S.A. 2010. ISA software suite: Supporting standards-compliant experimental annotation and enabling curation at the community level. Bioinformatics 26:2354-2356. doi: 10.1093/bioinformatics/btq415.
-
(2010)
Bioinformatics
, vol.26
, pp. 2354-2356
-
-
Rocca-Serra, P.1
Brandizi, M.2
Maguire, E.3
Sklyar, N.4
Taylor, C.5
Begley, K.6
Field, D.7
Harris, S.8
Hide, W.9
Hofmann, O.10
Neumann, S.11
Sterk, P.12
Tong, W.13
Sansone, S.A.14
-
9
-
-
84880576609
-
The MetaboLights repository: Curation challenges in metabolomics
-
Salek, R.M., Haug, K., Conesa, P., Hastings, J., Williams, M., Mahendraker, T., Maguire, E., González-Beltrán, A.N., Rocca-Serra, P., Sansone, S.A., and Steinbeck, C. 2013. The MetaboLights repository: Curation challenges in metabolomics. Database 2013:bat029. doi:10.1093/database/bat029.
-
(2013)
Database
, vol.2013
, pp. 29
-
-
Salek, R.M.1
Haug, K.2
Conesa, P.3
Hastings, J.4
Williams, M.5
Mahendraker, T.6
Maguire, E.7
González-Beltrán, A.N.8
Rocca-Serra, P.9
Sansone, S.A.10
Steinbeck, C.11
-
10
-
-
34547778398
-
The metabolomics standards initiative
-
Sansone, S.A., Fan, T., Goodacre, R., Griffin, J.L., Hardy, N.W., Kaddurah-Daouk, R.,Kristal, B.S., Lindon, J.,Mendes, P.,Morrison, N.,Nikolau, B., Robertson, D., Sumner, L.W., Taylor, C., van der Werf, M., van Ommen, B., and Fiehn, O. 2007. The metabolomics standards initiative. Nat. Biotechnol. 25:846-848. doi: 10.1038/nbt0807-846b.
-
(2007)
Nat. Biotechnol.
, vol.25
, pp. 846-848
-
-
Sansone, S.A.1
Fan, T.2
Goodacre, R.3
Griffin, J.L.4
Hardy, N.W.5
Kaddurah-Daouk, R.6
Kristal, B.S.7
Lindon, J.8
Mendes, P.9
Morrison, N.10
Nikolau, B.11
Robertson, D.12
Sumner, L.W.13
Taylor, C.14
van der Werf, M.15
van Ommen, B.16
Fiehn, O.17
-
11
-
-
32444432587
-
METLIN: A metabolite mass spectral database
-
Smith, C.A., O’Maille, G., Want, E.J., Qin, C., Trauger, S.A., Brandon, T.R., Custodio, D.E., Abagyan R., and Siuzdak, G. 2005. METLIN: A metabolite mass spectral database. Ther. Drug Monit. 27:747-751. doi:10.1097/01.ftd.0000179845.53213.39.
-
(2005)
Ther. Drug Monit.
, vol.27
, pp. 747-751
-
-
Smith, C.A.1
O’Maille, G.2
Want, E.J.3
Qin, C.4
Trauger, S.A.5
Brandon, T.R.6
Custodio, D.E.7
Abagyan, R.8
Siuzdak, G.9
-
12
-
-
38549138986
-
BioMagRes-Bank
-
Ulrich, E.L., Akutsu, H., Doreleijers, J.F., Harano, Y., Ioannidis, Y.E., Lin, J., Livny, M., Mading, S., Maziuk, D., Miller, Z., Nakatani, E., Schulte, C.F., Tolmie, D.E., Kent Wenger, R., Yao, H., and Markley J.L. 2008. BioMagRes-Bank. Nucl. Acids Res. 36:D402-D408. doi:10.1093/nar/gkm957.
-
(2008)
Nucl. Acids Res.
, vol.36
, pp. D402-D408
-
-
Ulrich, E.L.1
Akutsu, H.2
Doreleijers, J.F.3
Harano, Y.4
Ioannidis, Y.E.5
Lin, J.6
Livny, M.7
Mading, S.8
Maziuk, D.9
Miller, Z.10
Nakatani, E.11
Schulte, C.F.12
Tolmie, D.E.13
Kent Wenger, R.14
Yao, H.15
Markley, J.L.16
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