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Volumn 99, Issue , 2016, Pages 385-391

Nucleotide excision repair of oxidised genomic DNA is not a source of urinary 8-oxo-7,8-dihydro-2′-deoxyguanosine

(17)  Evans, Mark D a,i   Mistry, Vilas a   Singh, Rajinder a   Gackowski, Daniel b   Różalski, Rafał b   Siomek Gorecka, Agnieszka b   Phillips, David H c,j   Zuo, Jie c,k   Mullenders, Leon d   Pines, Alex d   Nakabeppu, Yusaku e   Sakumi, Kunihiko e   Sekiguchi, Mutsuo f   Tsuzuki, Teruhisa g   Bignami, Margherita h   Oliński, Ryszard b   Cooke, Marcus S a,l  


Author keywords

8 oxo 7,8 dihydro 2 deoxyguanosine; MTH1; Nucleotide excision repair; Oxidative stress; Transcription coupled repair; Urine

Indexed keywords

8 HYDROXYDEOXYGUANOSINE; BIOLOGICAL MARKER; GENOMIC DNA; 8-OXO-7-HYDRODEOXYGUANOSINE; DEOXYGUANOSINE; DEOXYGUANOSINE PHOSPHATE; DEOXYGUANOSINE TRIPHOSPHATE; DNA; NUDT1 PROTEIN, MOUSE; PHOSPHATASE; XERODERMA PIGMENTOSUM GROUP A PROTEIN;

EID: 84985993956     PISSN: 08915849     EISSN: 18734596     Source Type: Journal    
DOI: 10.1016/j.freeradbiomed.2016.08.018     Document Type: Article
Times cited : (27)

References (53)
  • 1
    • 0038799736 scopus 로고    scopus 로고
    • Oxidative DNA damage: mechanisms, mutation, and disease
    • [1] Cooke, M.S., Evans, M.D., Dizdaroglu, M., Lunec, J., Oxidative DNA damage: mechanisms, mutation, and disease. FASEB J. 17 (2003), 1195–1214.
    • (2003) FASEB J. , vol.17 , pp. 1195-1214
    • Cooke, M.S.1    Evans, M.D.2    Dizdaroglu, M.3    Lunec, J.4
  • 4
    • 84859418108 scopus 로고    scopus 로고
    • Urinary 8-oxoguanine as a predictor of survival in patients undergoing radiotherapy
    • [4] Roszkowski, K., Olinski, R., Urinary 8-oxoguanine as a predictor of survival in patients undergoing radiotherapy. Cancer Epidemiol. Biomark. Prev. 21 (2012), 629–634.
    • (2012) Cancer Epidemiol. Biomark. Prev. , vol.21 , pp. 629-634
    • Roszkowski, K.1    Olinski, R.2
  • 5
    • 57749121608 scopus 로고    scopus 로고
    • 8-Oxoguanine-mediated transcriptional mutagenesis causes Ras activation in mammalian cells
    • [5] Saxowsky, T.T., Meadows, K.L., Klungland, A., Doetsch, P.W., 8-Oxoguanine-mediated transcriptional mutagenesis causes Ras activation in mammalian cells. Proc. Natl. Acad. Sci. USA 105 (2008), 18877–18882.
    • (2008) Proc. Natl. Acad. Sci. USA , vol.105 , pp. 18877-18882
    • Saxowsky, T.T.1    Meadows, K.L.2    Klungland, A.3    Doetsch, P.W.4
  • 6
    • 0025891928 scopus 로고
    • Immunoaffinity isolation of urinary 8-hydroxy-2′-deoxyguanosine and 8-hydroxyguanine and quantitation of 8-hydroxy-2′-deoxyguanosine in DNA by polyclonal antibodies
    • [6] Degan, P., Shigenaga, M.K., Park, E.M., Alperin, P.E., Ames, B.N., Immunoaffinity isolation of urinary 8-hydroxy-2′-deoxyguanosine and 8-hydroxyguanine and quantitation of 8-hydroxy-2′-deoxyguanosine in DNA by polyclonal antibodies. Carcinogenesis 12 (1991), 865–871.
    • (1991) Carcinogenesis , vol.12 , pp. 865-871
    • Degan, P.1    Shigenaga, M.K.2    Park, E.M.3    Alperin, P.E.4    Ames, B.N.5
  • 7
    • 77956245228 scopus 로고    scopus 로고
    • DNA repair and the origins of urinary oxidized 2′-deoxyribonucleosides
    • [7] Evans, M.D., Saparbaev, M., Cooke, M.S., DNA repair and the origins of urinary oxidized 2′-deoxyribonucleosides. Mutagenesis 25 (2010), 433–442.
    • (2010) Mutagenesis , vol.25 , pp. 433-442
    • Evans, M.D.1    Saparbaev, M.2    Cooke, M.S.3
  • 9
    • 10644276033 scopus 로고    scopus 로고
    • Diet is not responsible for the presence of several oxidatively damaged DNA lesions in mouse urine
    • [9] Rozalski, R., Siomek, A., Gackowski, D., Foksinski, M., Gran, C., Klungland, A., Olinski, R., Diet is not responsible for the presence of several oxidatively damaged DNA lesions in mouse urine. Free Radic. Res. 38 (2004), 1201–1205.
    • (2004) Free Radic. Res. , vol.38 , pp. 1201-1205
    • Rozalski, R.1    Siomek, A.2    Gackowski, D.3    Foksinski, M.4    Gran, C.5    Klungland, A.6    Olinski, R.7
  • 10
    • 0035695310 scopus 로고    scopus 로고
    • 8-Oxo-7,8-dihydroguanine and 8-oxo-7,8-dihydro-2′-deoxyguanosine levels in human urine do not depend on diet
    • [10] Gackowski, D., Rozalski, R., Roszkowski, K., Jawien, A., Foksinski, M., Olinski, R., 8-Oxo-7,8-dihydroguanine and 8-oxo-7,8-dihydro-2′-deoxyguanosine levels in human urine do not depend on diet. Free Radic. Res. 35 (2001), 825–832.
    • (2001) Free Radic. Res. , vol.35 , pp. 825-832
    • Gackowski, D.1    Rozalski, R.2    Roszkowski, K.3    Jawien, A.4    Foksinski, M.5    Olinski, R.6
  • 12
    • 0034107668 scopus 로고    scopus 로고
    • Urinary 8-oxo-2′-deoxyguanosine – source, significance and supplements
    • [12] Cooke, M.S., Evans, M.D., Herbert, K.E., Lunec, J., Urinary 8-oxo-2′-deoxyguanosine – source, significance and supplements. Free Radic. Res. 32 (2000), 381–397.
    • (2000) Free Radic. Res. , vol.32 , pp. 381-397
    • Cooke, M.S.1    Evans, M.D.2    Herbert, K.E.3    Lunec, J.4
  • 13
    • 0022530342 scopus 로고
    • Photoreversal-dependent release of thymidine and thymidine monophosphate from pyrimidine dimer-containing DNA excision fragments isolated from ultraviolet-damaged human fibroblasts
    • [13] Weinfeld, M., Gentner, N.E., Johnson, L.D., Paterson, M.C., Photoreversal-dependent release of thymidine and thymidine monophosphate from pyrimidine dimer-containing DNA excision fragments isolated from ultraviolet-damaged human fibroblasts. Biochemistry 25 (1986), 2656–2664.
    • (1986) Biochemistry , vol.25 , pp. 2656-2664
    • Weinfeld, M.1    Gentner, N.E.2    Johnson, L.D.3    Paterson, M.C.4
  • 14
    • 0027952820 scopus 로고
    • Metabolic processing of cyclobutyl pyrimidine dimers and (6-4) photoproducts in UV-treated human cells. Evidence for distinct excision-repair pathways
    • [14] Galloway, A.M., Liuzzi, M., Paterson, M.C., Metabolic processing of cyclobutyl pyrimidine dimers and (6-4) photoproducts in UV-treated human cells. Evidence for distinct excision-repair pathways. J. Biol. Chem. 269 (1994), 974–980.
    • (1994) J. Biol. Chem. , vol.269 , pp. 974-980
    • Galloway, A.M.1    Liuzzi, M.2    Paterson, M.C.3
  • 15
    • 84877973566 scopus 로고    scopus 로고
    • DNA nucleotide excision repair, where do all the cyclobutane pyrimidine dimers go?
    • [15] Cooke, M.S., Harry, E.L., Liljendahl, T.S., Segerback, D., DNA nucleotide excision repair, where do all the cyclobutane pyrimidine dimers go?. Cell Cycle, 12, 2013, 1642.
    • (2013) Cell Cycle , vol.12 , pp. 1642
    • Cooke, M.S.1    Harry, E.L.2    Liljendahl, T.S.3    Segerback, D.4
  • 16
    • 84886813438 scopus 로고    scopus 로고
    • Comet-FISH with strand-specific probes reveals transcription-coupled repair of 8-oxoGuanine in human cells
    • [16] Guo, J., Hanawalt, P.C., Spivak, G., Comet-FISH with strand-specific probes reveals transcription-coupled repair of 8-oxoGuanine in human cells. Nucleic Acids Res. 41 (2013), 7700–7712.
    • (2013) Nucleic Acids Res. , vol.41 , pp. 7700-7712
    • Guo, J.1    Hanawalt, P.C.2    Spivak, G.3
  • 17
    • 84855269422 scopus 로고    scopus 로고
    • Targeted detection of in vivo endogenous DNA base damage reveals preferential base excision repair in the transcribed strand
    • [17] Reis, A.M., Mills, W.K., Ramachandran, I., Friedberg, E.C., Thompson, D., Queimado, L., Targeted detection of in vivo endogenous DNA base damage reveals preferential base excision repair in the transcribed strand. Nucleic Acids Res. 40 (2012), 206–219.
    • (2012) Nucleic Acids Res. , vol.40 , pp. 206-219
    • Reis, A.M.1    Mills, W.K.2    Ramachandran, I.3    Friedberg, E.C.4    Thompson, D.5    Queimado, L.6
  • 19
    • 0032915243 scopus 로고    scopus 로고
    • Spontaneous mutation, oxidative DNA damage, and the roles of base and nucleotide excision repair in the yeast Saccharomyces cerevisiae
    • [19] Scott, A.D., Neishabury, M., Jones, D.H., Reed, S.H., Boiteux, S., Waters, R., Spontaneous mutation, oxidative DNA damage, and the roles of base and nucleotide excision repair in the yeast Saccharomyces cerevisiae. Yeast 15 (1999), 205–218.
    • (1999) Yeast , vol.15 , pp. 205-218
    • Scott, A.D.1    Neishabury, M.2    Jones, D.H.3    Reed, S.H.4    Boiteux, S.5    Waters, R.6
  • 20
    • 0030745912 scopus 로고    scopus 로고
    • In vitro repair of oxidative DNA damage by human nucleotide excision repair system: possible explanation for neurodegeneration in xeroderma pigmentosum patients
    • [20] Reardon, J.T., Bessho, T., Kung, H.C., Bolton, P.H., Sancar, A., In vitro repair of oxidative DNA damage by human nucleotide excision repair system: possible explanation for neurodegeneration in xeroderma pigmentosum patients. Proc. Natl. Acad. Sci. USA 94 (1997), 9463–9468.
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 9463-9468
    • Reardon, J.T.1    Bessho, T.2    Kung, H.C.3    Bolton, P.H.4    Sancar, A.5
  • 21
    • 7744244596 scopus 로고    scopus 로고
    • 8-oxo-7,8-dihydroguanine is removed by a nucleotide excision repair-like mechanism in Porphyromonas gingivalis W83
    • [21] Johnson, N.A., McKenzie, R., McLean, L., Sowers, L.C., Fletcher, H.M., 8-oxo-7,8-dihydroguanine is removed by a nucleotide excision repair-like mechanism in Porphyromonas gingivalis W83. J. Bacteriol. 186 (2004), 7697–7703.
    • (2004) J. Bacteriol. , vol.186 , pp. 7697-7703
    • Johnson, N.A.1    McKenzie, R.2    McLean, L.3    Sowers, L.C.4    Fletcher, H.M.5
  • 22
    • 84871959255 scopus 로고    scopus 로고
    • Nucleotide excision repair-initiating proteins bind to oxidative DNA lesions in vivo
    • [22] Menoni, H., Hoeijmakers, J.H., Vermeulen, W., Nucleotide excision repair-initiating proteins bind to oxidative DNA lesions in vivo. J. Cell Biol. 199 (2012), 1037–1046.
    • (2012) J. Cell Biol. , vol.199 , pp. 1037-1046
    • Menoni, H.1    Hoeijmakers, J.H.2    Vermeulen, W.3
  • 23
    • 57149110051 scopus 로고    scopus 로고
    • The nucleotide pool, a target for low-dose gamma-ray-induced oxidative stress
    • [23] Sangsuwan, T., Haghdoost, S., The nucleotide pool, a target for low-dose gamma-ray-induced oxidative stress. Radiat. Res. 170 (2008), 776–783.
    • (2008) Radiat. Res. , vol.170 , pp. 776-783
    • Sangsuwan, T.1    Haghdoost, S.2
  • 26
    • 0037374556 scopus 로고    scopus 로고
    • Ogg1 knockout-associated lung tumorigenesis and its suppression by Mth1 gene disruption
    • [26] Sakumi, K., Tominaga, Y., Furuichi, M., Xu, P., Tsuzuki, T., Sekiguchi, M., Nakabeppu, Y., Ogg1 knockout-associated lung tumorigenesis and its suppression by Mth1 gene disruption. Cancer Res. 63 (2003), 902–905.
    • (2003) Cancer Res. , vol.63 , pp. 902-905
    • Sakumi, K.1    Tominaga, Y.2    Furuichi, M.3    Xu, P.4    Tsuzuki, T.5    Sekiguchi, M.6    Nakabeppu, Y.7
  • 28
    • 0031912917 scopus 로고    scopus 로고
    • Simultaneous determination of creatine, uric acid, creatinine and hippuric acid in urine by high performance liquid chromatography
    • [28] Yang, Y.D., Simultaneous determination of creatine, uric acid, creatinine and hippuric acid in urine by high performance liquid chromatography. Biomed. Chromatogr. 12 (1998), 47–49.
    • (1998) Biomed. Chromatogr. , vol.12 , pp. 47-49
    • Yang, Y.D.1
  • 29
    • 84861017463 scopus 로고    scopus 로고
    • Rapid measurement of 8-oxo-7,8-dihydro-2'-deoxyguanosine in human biological matrices using ultra-high-performance liquid chromatography-tandem mass spectrometry
    • [29] Lam, P.M., Mistry, V., Marczylo, T.H., Konje, J.C., Evans, M.D., Cooke, M.S., Rapid measurement of 8-oxo-7,8-dihydro-2'-deoxyguanosine in human biological matrices using ultra-high-performance liquid chromatography-tandem mass spectrometry. Free Radic. Biol. Med. 52 (2012), 2057–2063.
    • (2012) Free Radic. Biol. Med. , vol.52 , pp. 2057-2063
    • Lam, P.M.1    Mistry, V.2    Marczylo, T.H.3    Konje, J.C.4    Evans, M.D.5    Cooke, M.S.6
  • 30
    • 32944469912 scopus 로고    scopus 로고
    • Effect of creatinine and specific gravity normalization techniques on xenobiotic biomarkers in smokers' spot and 24-h urines
    • [30] Heavner, D.L., Morgan, W.T., Sears, S.B., Richardson, J.D., Byrd, G.D., Ogden, M.W., Effect of creatinine and specific gravity normalization techniques on xenobiotic biomarkers in smokers' spot and 24-h urines. J. Pharm. Biomed. Anal. 40 (2006), 928–942.
    • (2006) J. Pharm. Biomed. Anal. , vol.40 , pp. 928-942
    • Heavner, D.L.1    Morgan, W.T.2    Sears, S.B.3    Richardson, J.D.4    Byrd, G.D.5    Ogden, M.W.6
  • 31
    • 11244327638 scopus 로고    scopus 로고
    • Establishing the background level of base oxidation in human lymphocyte DNA: results of an interlaboratory validation study
    • [31] Gedik, C.M., Collins, A., ESCODD, Establishing the background level of base oxidation in human lymphocyte DNA: results of an interlaboratory validation study. FASEB J. 19 (2005), 82–84.
    • (2005) FASEB J. , vol.19 , pp. 82-84
    • Gedik, C.M.1    Collins, A.2    ESCODD3
  • 32
    • 60149095890 scopus 로고    scopus 로고
    • Simultaneous determination of 8-oxo-2′-deoxyguanosine and 8-oxo-2′-deoxyadenosine in DNA using online column-switching liquid chromatography/tandem mass spectrometry
    • [32] Singh, R., Teichert, F., Verschoyle, R.D., Kaur, B., Vives, M., Sharma, R.A., Steward, W.P., Gescher, A.J., Farmer, P.B., Simultaneous determination of 8-oxo-2′-deoxyguanosine and 8-oxo-2′-deoxyadenosine in DNA using online column-switching liquid chromatography/tandem mass spectrometry. Rapid Commun. Mass Spectrom. 23 (2009), 151–160.
    • (2009) Rapid Commun. Mass Spectrom. , vol.23 , pp. 151-160
    • Singh, R.1    Teichert, F.2    Verschoyle, R.D.3    Kaur, B.4    Vives, M.5    Sharma, R.A.6    Steward, W.P.7    Gescher, A.J.8    Farmer, P.B.9
  • 33
    • 15044349323 scopus 로고    scopus 로고
    • Substantial decrease of urinary 8-oxo-7,8-dihydroguanine, a product of the base excision repair pathway, in DNA glycosylase defective mice
    • [33] Rozalski, R., Siomek, A., Gackowski, D., Foksinski, M., Gran, C., Klungland, A., Olinski, R., Substantial decrease of urinary 8-oxo-7,8-dihydroguanine, a product of the base excision repair pathway, in DNA glycosylase defective mice. Int. J. Biochem. Cell Biol. 37 (2005), 1331–1336.
    • (2005) Int. J. Biochem. Cell Biol. , vol.37 , pp. 1331-1336
    • Rozalski, R.1    Siomek, A.2    Gackowski, D.3    Foksinski, M.4    Gran, C.5    Klungland, A.6    Olinski, R.7
  • 34
    • 61549104499 scopus 로고    scopus 로고
    • Cautionary insights on knockout mouse studies: the gene or not the gene?
    • [34] Eisener-Dorman, A.F., Lawrence, D.A., Bolivar, V.J., Cautionary insights on knockout mouse studies: the gene or not the gene?. Brain Behav. Immun. 23 (2009), 318–324.
    • (2009) Brain Behav. Immun. , vol.23 , pp. 318-324
    • Eisener-Dorman, A.F.1    Lawrence, D.A.2    Bolivar, V.J.3
  • 36
    • 0032509471 scopus 로고    scopus 로고
    • Repair pathways for processing of 8-oxoguanine in DNA by mammalian cell extracts
    • [36] Dianov, G., Bischoff, C., Piotrowski, J., Bohr, V.A., Repair pathways for processing of 8-oxoguanine in DNA by mammalian cell extracts. J. Biol. Chem. 273 (1998), 33811–33816.
    • (1998) J. Biol. Chem. , vol.273 , pp. 33811-33816
    • Dianov, G.1    Bischoff, C.2    Piotrowski, J.3    Bohr, V.A.4
  • 37
    • 0032077542 scopus 로고    scopus 로고
    • Efficient in vitro repair of 7-hydro-8-oxodeoxyguanosine by human cell extracts: involvement of multiple pathways
    • [37] Jaiswal, M., Lipinski, L.J., Bohr, V.A., Mazur, S.J., Efficient in vitro repair of 7-hydro-8-oxodeoxyguanosine by human cell extracts: involvement of multiple pathways. Nucleic Acids Res. 26 (1998), 2184–2191.
    • (1998) Nucleic Acids Res. , vol.26 , pp. 2184-2191
    • Jaiswal, M.1    Lipinski, L.J.2    Bohr, V.A.3    Mazur, S.J.4
  • 39
    • 0037089147 scopus 로고    scopus 로고
    • A quantitative model of human DNA base excision repair. I. Mechanistic insights
    • [39] Sokhansanj, B.A., Rodrigue, G.R., Fitch, J.P., Wilson, D.M. 3rd, A quantitative model of human DNA base excision repair. I. Mechanistic insights. Nucleic Acids Res. 30 (2002), 1817–1825.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 1817-1825
    • Sokhansanj, B.A.1    Rodrigue, G.R.2    Fitch, J.P.3    Wilson, D.M.4
  • 42
  • 43
    • 4544243741 scopus 로고    scopus 로고
    • Transcription activities at 8-oxoG lesions in DNA
    • [43] Larsen, E., Kwon, K., Coin, F., Egly, J.M., Klungland, A., Transcription activities at 8-oxoG lesions in DNA. DNA Repair 3 (2004), 1457–1468.
    • (2004) DNA Repair , vol.3 , pp. 1457-1468
    • Larsen, E.1    Kwon, K.2    Coin, F.3    Egly, J.M.4    Klungland, A.5
  • 45
    • 4444339833 scopus 로고    scopus 로고
    • Oxidative DNA damage and disease: induction, repair and significance
    • [45] Evans, M.D., Dizdaroglu, M., Cooke, M.S., Oxidative DNA damage and disease: induction, repair and significance. Mutat. Res. 567 (2004), 1–61.
    • (2004) Mutat. Res. , vol.567 , pp. 1-61
    • Evans, M.D.1    Dizdaroglu, M.2    Cooke, M.S.3
  • 46
    • 84862302029 scopus 로고    scopus 로고
    • Human MTH3 (NUDT18) protein hydrolyzes oxidized forms of guanosine and deoxyguanosine diphosphates: comparison with MTH1 and MTH2
    • [46] Takagi, Y., Setoyama, D., Ito, R., Kamiya, H., Yamagata, Y., Sekiguchi, M., Human MTH3 (NUDT18) protein hydrolyzes oxidized forms of guanosine and deoxyguanosine diphosphates: comparison with MTH1 and MTH2. J. Biol. Chem. 287 (2012), 21541–21549.
    • (2012) J. Biol. Chem. , vol.287 , pp. 21541-21549
    • Takagi, Y.1    Setoyama, D.2    Ito, R.3    Kamiya, H.4    Yamagata, Y.5    Sekiguchi, M.6
  • 47
    • 0028927316 scopus 로고
    • Generation and elimination of 8-oxo-7,8-dihydro-2′-deoxyguanosine 5′-triphosphate, a mutagenic substrate for DNA synthesis, in human cells
    • [47] Hayakawa, H., Taketomi, A., Sakumi, K., Kuwano, M., Sekiguchi, M., Generation and elimination of 8-oxo-7,8-dihydro-2′-deoxyguanosine 5′-triphosphate, a mutagenic substrate for DNA synthesis, in human cells. Biochemistry 34 (1995), 89–95.
    • (1995) Biochemistry , vol.34 , pp. 89-95
    • Hayakawa, H.1    Taketomi, A.2    Sakumi, K.3    Kuwano, M.4    Sekiguchi, M.5
  • 49
    • 77950338379 scopus 로고    scopus 로고
    • Suppression of mutagenesis by 8-hydroxy-2′-deoxyguanosine 5′-triphosphate (7,8-dihydro-8-oxo-2′-deoxyguanosine 5′-triphosphate) by human MTH1, MTH2, and NUDT5
    • [49] Hori, M., Satou, K., Harashima, H., Kamiya, H., Suppression of mutagenesis by 8-hydroxy-2′-deoxyguanosine 5′-triphosphate (7,8-dihydro-8-oxo-2′-deoxyguanosine 5′-triphosphate) by human MTH1, MTH2, and NUDT5. Free Radic. Biol. Med. 48 (2010), 1197–1201.
    • (2010) Free Radic. Biol. Med. , vol.48 , pp. 1197-1201
    • Hori, M.1    Satou, K.2    Harashima, H.3    Kamiya, H.4
  • 53
    • 84861473820 scopus 로고    scopus 로고
    • Human Mut T homolog 1 (MTH1)
    • [53] Rai, P., Human Mut T homolog 1 (MTH1). Small GTPases 3 (2012), 120–125.
    • (2012) Small GTPases , vol.3 , pp. 120-125
    • Rai, P.1


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