Estimates of the direct effect of seawater pH on the survival rate of species groups in the California current ecosystem

PLoS ONE

Volumn 11, Issue 8, 2016, Pages

  Busch, D Shallin ^a   McElhany, Paul ^b  

^a ALASKA FISHERIES SCIENCE CENTER   (United States)

^b NORTHWEST FISHERIES SCIENCE CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CALCIUM CARBONATE; CARBON DIOXIDE; FUNCTIONAL GROUP; SEA WATER;

ACIDIFICATION; ARTICLE; BENTHOS; CLIMATE CHANGE; CONTROLLED STUDY; ECOSYSTEM; MARINE ENVIRONMENT; MESOCOSM; NONHUMAN; OCEAN ACIDIFICATION; OYSTER; PH; SEA URCHIN; SENSITIVITY ANALYSIS; SPECIES DIFFERENCE; SURVIVAL RATE; ANIMAL; BIODIVERSITY; CALIFORNIA; CHEMISTRY; ENVIRONMENTAL MONITORING; FACTUAL DATABASE; WATER FLOW;

ANIMALS; BIODIVERSITY; CALIFORNIA; CARBON DIOXIDE; DATABASES, FACTUAL; ENVIRONMENTAL MONITORING; HYDROGEN-ION CONCENTRATION; SEAWATER; SPECIES SPECIFICITY; WATER MOVEMENTS;

EID: 84983546356     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0160669     Document Type: Article

References (65)

1. Doney SC, Fabry VJ, Feely RA, Kleypas JA (2009) Ocean acidification: the other CO2 problem. Annual Review of Marine Science 2009. 1: 169-192.
2. Feely RA, Sabine CL, Lee K, Berelson W, Kleypas J, Fabry VJ, et al. (2004) Impact of anthropogenic CO2 on the CaCO3 system in the oceans. Science 305: 362-366. PMID: 15256664
3. Sabine CL, Feely RA, Gruber N, Key RM, Lee K, Bullister JL, et al. (2004) The oceanic sink for anthropogenic CO2. Science 305: 367-371. PMID: 15256665
4. Clarkson MO, Kasemann SA, Wood RA, Lenton TM, Daines SJ, Richoz S, et al. (2015) Ocean acidification and the Permo-Triassic mass extinction. Science 348: 229-232. doi: 10.1126/science.aaa0193 PMID: 25859043
5. Busch DS, Harvey CJ, McElhany P (2013) Potential impacts of ocean acidifcation on the Puget Sound food web. ICES Journal of Marine Science 70: 823-833.
6. Griffith GP, Fulton EA, Gorton R, Richardson AJ (2012) Predicting interactions among fishing, ocean warming, and ocean acidification in a marine system with whole-ecosystem models. Conservation Biology 26: 1145-1152. doi: 10.1111/j.1523-1739.2012.01937.x PMID: 23009091
7. Hall-Spencer JM, Rodolfo-Metalpa R, Martin S, Ransome E, Fine M, Turner SM, et al. (2008) Volcanic carbon dioxide vents show ecosystem effects of ocean acidification. Nature 454: 96-99. doi: 10.1038/ nature07051 PMID: 18536730
8. Fabricius KE, De'ath G, Noonan S, Uthicke S (2014) Ecological effects of ocean acidification and habitat complexity on reef-associated macroinvertebrate communities. Proceedings of the Royal Society B: Biological Sciences 281.
9. Enochs IC, Manzello DP, Donham EM, Kolodziej G, Okano R, Johnston L, et al. (2015) Shift from coral to macroalgae dominance on a volcanically acidified reef. Nature Climate Change 5: 1083-1088.
10. Barton A, Hales B, Waldbusser GG, Langdon C, Feely RA (2012) The Pacific oyster, Crassostrea gigas, shows negative correlation to naturally elevated carbon dioxide levels: Implications for near-term ocean acidification effects. Limnology and Oceanography 57: 698-710.
11. Bednaršek N, Feely RA, Reum JCP, Peterson B, Menkel J, Alin S, et al. (2014) Limacina helicina shell dissolution as an indicator of declining habitat suitability due to ocean acidification in the California Current Ecosystem. Proceedings of the Royal Society B: Biological Sciences 281: 20140123. doi: 10. 1098/rspb.2014.0123 PMID: 24789895
12. Bednaršek N, Tarling GA, Bakker DCE, Fielding S, Jones EM, Venables HJ, et al. (2012) Extensive dissolution of live pteropods in the Southern Ocean. Nature Geosciences 5: 881-885.
13. Kroeker KJ, Kordas RL, Crim R, Hendriks IE, Ramajo L, Singh GS, et al. (2013) Impacts of ocean acidification on marine organisms: quantifying sensitivities and interaction with warming. Global Change Biology 19: 1884-1896. doi: 10.1111/gcb.12179 PMID: 23505245
14. Kroeker KJ, Kordas RL, Crim RN, Singh GG (2010) Meta-analysis reveals negative yet variable effects of ocean acidification on marine organisms. Ecology Letters 13: 1419-1434. doi: 10.1111/j.1461-0248. 2010.01518.x PMID: 20958904
15. Wittmann AC, Pörtner H-O (2013) Sensitivities of extant animal taxa to ocean acidification. Nature Climate Change 3: 995-1001.
16. Cooley SR, Jewett EB, Reichert J, Robbins L, Shrestha G, Wieczorek D, et al. (2015) Getting ocean acidification on decision makers' to-do lists: dissecting the process through case studies. Oceanography 28: 198-211.
17. Ainsworth CH, Samhouri JF, Busch DS, Chueng WWL, Dunne J, Okey TA (2011) Potential impacts of climate change on Northeast Pacific marine fisheries and food webs. ICES Journal of Marine Science 68: 1217-1229.
18. Busch DS, O'Donnell MJ, Hauri C, Mach KJ, Poach M, Doney SC, et al. (2015) Understanding, characterizing, and communicating responses to ocean acidification: challenges and uncertainties. Oceanography 28: 30-39.
19. Andersson AJ, Kline DI, Edmunds PJ, Archer SD, Bednarsek N, Carpenter RC, et al. (2015) Understanding ocean acidification impacts on organismal to ecological scales. Oceanography 28: 16-27.
20. Schindler DW, Mills KH, Malley DF, Findlay DL, Shearer JA, Davies IJ, et al. (1985) Long-term ecosystem stress: the effects of years of experimental acidification on a small lake. Science 228: 1395-1401. PMID: 17814473
21. Lohbeck KT, Riebesell U, Reusch TBH (2012) Adaptive evolution of a key phytoplankton species to ocean acidification. Nature Geosciences 5: 346-351.
22. Tatters AO, Schnetzer A, Fu F, Lie AYA, Caron DA, Hutchins DA (2013) Short-versus long-term responses to changing CO2 in a coastal dinoflagellate bloom: implications for interspecific competitive interactions and community structure. Evolution 67: 1879-1891. doi: 10.1111/evo.12029 PMID: 23815646
23. Thor P, Dupont S (2015) Transgenerational effects alleviate severe fecundity loss during ocean acidification in a ubiquitous planktonic copepod. Global Change Biology 21: 2261-2271. doi: 10.1111/gcb. 12815 PMID: 25430823
24. McElhany P, Busch DS (2013) Appropriate pCO2 treatments in ocean acidification experiments. Marine Biology 160: 1807-1812.
25. Haigh R, Ianson D, Holt CA, Neate HE, Edwards AM (2015) Effects of ocean acidification on temperate coastal marine ecosystems and fisheries in the Northeast Pacific. PLOS ONE 10: e0117533. doi: 10. 1371/journal.pone.0117533 PMID: 25671596
26. Waldbusser GG, Hales B, Langdon CJ, Haley BA, Schrader P, Brunner EL, et al. (2015) Ocean acidification has multiple modes of action on bivalve larvae. PLOS ONE 10: e0128376. doi: 10.1371/journal. pone.0128376 PMID: 26061095
27. Kaplan IC, Marshall KN, Hodgson E, Koehn L (2014) Update for 2014 methodology review: ongoing revisions to the spatially explicit Atlantis ecosystem model of the California Current. NOAA Northwest Fisheries Science Center and University of Washington.
28. Brand EJ, Kaplan IC, Harvey CJ, Levin PS, Fulton EA, Hermann AJ, et al. (2007) A spatially explicit ecosystem model of the California Current's food web and oceanography. NOAA Technical Memorandum NMFS-NWFSC-84. 145 p.
29. Horne P, Kaplan IC, Marshall K, Levin PS, Harvey CJ, Hermann AJ, et al. (2010) Design and parameterization of a spatially explicity ecosystem model of the central California Current. NOAA Technical Memorandum NMFS-NWFSC-1 04. 140 p.
30. Kaplan IC, Horne PJ, Levin PS (2012) Screening California Current fishery management scenarios using the Atlantis end-to-end ecosystem model. Progress in Oceanography 102: 5-18.
31. Kaplan IC, Levin PS, Burden M, Fulton EA (2010) Fishing catch shares in the face of global change: a framework for integrating cumulative impacts and single species management. Canadian Journal of Fisheries Science 67: 1968-1982.
32. Feely RA, Sabine CL, Hernandez-Ayon JM, Ianson D, Hales B (2008) Evidence for upwelling of corrosive "acidified" water onto the continental shelf. Science 320: 1490-1492. doi: 10.1126/science. 1155676 PMID: 18497259
33. Gruber N, Hauri C, Lachkar Z, Loher D, Frölicher TL, Plattner G-K (2012) Rapid progression of ocean acidification in the California Current System. Science 337: 220-223. doi: 10.1126/science.1216773 PMID: 22700658
34. National Marine Fisheries Service (2015) Fisheries of the United States, 2014. U.S. Department of Commerce, NOAA Current Fishery Statistics No.2014. Available: https://www.st.nmfs.noaa.gov/ commercial-fisheries/fus/fus14/index
35. Miller JJ, Maher M, Bohaboy E, Friedman CS, McElhany P (2016). Exposure to low pH reduces survival and delays development in early life stages of Dungeness crab (Cancer magister). Marine Biology 163: 1-11.
36. Dupont S, Hall E, Calosi P, Lundve B (2014) First evidence of altered sensory quality in a shellfish exposed to decreased pH relevant to ocean acidification. Journal of Shellfish Research 33:857-861.
37. Nagelkerken I, Connell SD (2015) Global alteration of ocean ecosystem functioning due to increasing human CO2 emissions. Proceedings of the National Academy of Sciences 112: 13272-13277.
38. Pespeni MH, Chan F, Menge BA, Palumbi SR (2013) Signs of adaptation to local pH conditions across an environmental mosaic in the California Current Ecosystem. Integrative and Comparative Biology 53: 857-870. doi: 10.1093/icb/ict094 PMID: 23980118
39. Meyer J, Riebesell U (2015) Responses of coccolithophores to ocean acidification: a meta-analysis. Biogeosciences 12: 1671-1682.
40. Miller AW, Reynolds AC, Sobrino C, Riedel GF (2009) Shellfish face uncertain future in high CO2 world: influence of acidification on oyster larvae calcification and growth in estuaries. PLOS ONE 4: e5661. doi: 10.1371/journal.pone.0005661 PMID: 19478855
41. IPCC (2014) Summary for Policymakers. In: Climate Change 2014: Impacts, Adaptation, and Vulnerability. Part A: Global and Sectoral Aspects. Contribution of Working Group II to the Fifth Assessment Report of the Intergovernmental Panel on Climate Change. Field CB, Barros VR, Dokken DJ, Mach KJ, Mastrandrea MD, Bilir TE, et al., editors. Cambridge University Press, Cambridge, United Kingdom and New York, NY, USA.
42. Gattuso J-P, Brewer P, Hoegh-Guldberg O, Kleypas JA, Pörtner H-O, Schmidt D (2014) Ocean acidification: cross-chapter box. In: Climate Change 2014: Impacts, Adaptation, and Vulnerability. Part A: Global and Sectoral Aspects. Contribution of Working Group II to the Fifth Assessment Report of the Intergovernmental Panel on Climate Change. Field CB, Barros VR, Dokken DJ, Mach KJ, Mastrandrea MD, Bilir TE, et al., editors. Cambridge University Press, Cambridge, United Kingdom and New York, NY, USA.
43. Hoegh-Guldberg O, Cai R, Brewer PG, Fabry VJ, Hilmi K, Jung S, et al. (2014) The Ocean. In: Climate Change 2014: Impacts, Adaptation, and Vulnerability. Part A: Global and Sectoral Aspects. Contribution of Working Group II to the Fifth Assessment Report of the Intergovernmental Panel on Climate Change. Field CB, Barros VR, Dokken DJ, Mach KJ, Mastrandrea MD, Bilir TE, et al., editors. Cambridge University Press, Cambridge, United Kingdom and New York, NY, USA.
44. Pörtner H-O, Karl D, Boyd PW, Cheung W, Lluch-Cota SE, Nojiri Y, et al. (2014) Ocean systems. In: Climate Change 2014: Impacts, Adaptation, and Vulnerability. Part A: Global and Sectoral Aspects. Contribution of Working Group II to the Fifth Assessment Report of the Intergovernmental Panel on Climate Change. Field CB, Barros VR, Dokken DJ, Mach KJ, Mastrandrea MD, Bilir TE, et al., editors. Cambridge University Press, Cambridge, United Kingdom and New York, NY, USA.
45. Riebesell U, Fabry VJ, Hansson L, Gattuso J-P, editors (2010) Guide to best practices for ocean acidification research and data reporting. Luxembourg: Publications Office of the European Union. 260 p.
46. Udovydchenkov IA, Duda TF, Doney SC, Lima ID (2010) Modeling deep ocean shipping noise in varying acidity conditions. The Journal of the Acoustical Society of America 128: EL130-EL136. doi: 10. 1121/1.3402284 PMID: 20815429
47. Hofmann GE, Smith JE, Johnson KS, Send U, Levin LA, Micheli F, et al. (2011) High-frequency dynamics of ocean pH: a multi-ecosystem comparison. PLOS ONE 6: e28983. doi: 10.1371/journal.pone. 0028983 PMID: 22205986
48. Tukey JW (1977) Exploratory data analysis: Pearson.
49. Browman HI (2016) Applying organized scepticisim to ocean acidification research. ICES Journal of Marine Science 73: 529-536.
50. Barton A, Waldbusser GG, Feely RA, Weisberg SB, Newton JA, Hales B, et al. (2015) Impacts of coastal acidification on the Pacific Northwest shellfish industry and adaptation strategies implemented in response. Oceanography 28: 146-159.
51. Padilla-Gamiño JL, Kelly MW, Evans TG, Hofmann GE (2013) Temperature and CO2 additively regulate physiology, morphology and genomic responses of larval sea urchins, Strongylocentrotus purpuratus. Proceedings of the Royal Society B: Biological Sciences 280: 20130155. doi: 10.1098/rspb.2013. 0155 PMID: 23536595
52. Ross PM, Parker L, O'Connor WA, Bailey EA (2011) The impact of ocean acidification on reproduction, early development and settlement of marine organisms. Water 3: 1005.
53. Feely RA, Klinger T, Newton J, Chadsey M (2013) Washington Blue Ribbon Panel on Ocean Acidification: Science white paper. NOAA Oceans and Atmospheric Research Special Report.
54. Evans W, Hales B, Strutton PG, Shearman RK, Barth JA (2015) Failure to bloom: Intense upwelling results in negligible phytoplankton response and prolonged CO2 outgassing over the Oregon shelf. Journal of Geophysical Research: Oceans 120: 1446-1461.
55. Samhouri JF, Levin PS (2012) Linking land-and sea-based activities to risk in coastal ecosystems. Biological Conservation 145: 118-129.
56. Hare JA, Morrison WE, Nelson MW, Stachura MM, Teeters EJ, Griffis RB, et al. (2016) A vulnerability assessment of fish and invertebrates to climate change on the Northeast U.S. continental shelf. PLOS ONE 11: e0146756. doi: 10.1371/journal.pone.0146756 PMID: 26839967
57. Hodgson E, Essington T, Kaplan IC (2014) Appendix management strategy (MS) 2013-05. Assessing the risk of ocean acidification in the California Current to two key fishery species, Dungeness crab (Cancer magister) and pink shrimp (Pandalus jordani) California Current Integrated Ecosystem Assessment Update 2013, U.S. Dept. Commerce, NOAA, Northwest and Southwest Fisheries Science Centers.
58. Field CB, Barros VR, Mach KJ, Mastrandrea MD, van Aalst M, Adger WN, et al. (2014) Technical summary. Ocean acidification: cross-chapter box. In: Climate Change 2014: Impacts, Adaptation, and Vulnerability. Summaries, Frequently Asked Questions, and Cross-Chapter Boxes. Contribution of Working Group II to the Fifth Assessment Report of the Intergovernmental Panel on Climate Change. Field CB, Barros VR, Dokken DJ, Mach KJ, Mastrandrea MD, Bilir TE, et al., editors. Cambridge University Press, Cambridge, United Kingdom and New York, NY, USA.
59. Pörtner H (2008) Ecosystem effects of ocean acidification in times of ocean warming: a physiologist's view. Marine Ecology Progress Series 373: 203-217.
60. Gao K, Helbling EW, Häder DP, Hutchins DA (2012) Responses of marine primary producers to interactions between ocean acidification, solar radiation, and warming. Marine Ecology Progress Series 470: 167-189.
61. Dutkiewicz S, Morris JJ, Follows MJ, Scott J, Levitan O, Dyhrman ST, et al. (2015) Impact of ocean acidification on the structure of future phytoplankton communities. Nature Climate Change 5:1002-1006.
62. Nilsson GE, Dixson DL, Domenici P, McCormick MI, Sorensen C, Watson S-A, et al. (2012) Near-future carbon dioxide levels alter fish behaviour by interfering with neurotransmitter function. Nature Climate Change 2: 201-204.
63. Fu FX, Place AR, Garcia NS, Hutchins DA (2010) CO2 and phosphate availability control the toxicity of the harmful bloom dinoflagellate Karlodinium veneficum. Aquatic Microbial Ecology 59: 55-65.
64. Cornwall CE, Hurd CL (In press) Experimental design in ocean acidification research: problems and solutions. ICES Journal of Marine Science.
65. Reum JCP, Alin SR, Harvey CJ, Bednarsek N, Evans W, Feely RA, et al. (2016) Interpretation and design of ocean acidification experiments in upwelling systems in the context of carbonate chemistry co-variation with temperature and oxygen. ICES Journal of Marine Science 73: 582-595.