Phylodynamics with Migration: A Computational Framework to Quantify Population Structure from Genomic Data

Molecular Biology and Evolution

Volumn 33, Issue 8, 2016, Pages 2102-2116

  Kühnert, Denise ^a,b,c   Stadler, Tanja ^a,c   Vaughan, Timothy G ^b   Drummond, Alexei J ^b  

^a ETH ZURICH   (Switzerland)

^b UNIVERSITY OF AUCKLAND   (New Zealand)

^c SWISS INSTITUTE OF BIOINFORMATICS   (Switzerland)

Author keywords

Bayesian inference; biogeography; birth death model; epidemiology; infectious diseases; phylogeography

Indexed keywords

ARTICLE; BIRTH; CONCEPTUAL FRAMEWORK; DEATH; EPIDEMIC; GENOME ANALYSIS; GEOGRAPHIC DISTRIBUTION; HIGH RISK POPULATION; HOST PATHOGEN INTERACTION; INFLUENZA A (H3N2); INFLUENZA A VIRUS (H3N2); LATVIA; NONHUMAN; PHYLODYNAMICS; PHYLOGENY; POPULATION DENSITY; POPULATION DYNAMICS; POPULATION MIGRATION; POPULATION STRUCTURE; PROBABILITY; SEASONAL VARIATION; SIMULATION; TROPICS; VIRUS TRANSMISSION; BAYES THEOREM; COMPUTER SIMULATION; GENETICS; GENOMICS; HUMAN; INFLUENZA, HUMAN; ISOLATION AND PURIFICATION; PHYLOGEOGRAPHY; PROCEDURES; TRANSMISSION; VIROLOGY;

BAYES THEOREM; COMPUTER SIMULATION; DISEASE OUTBREAKS; EPIDEMICS; GENOMICS; HUMANS; INFLUENZA A VIRUS, H3N2 SUBTYPE; INFLUENZA, HUMAN; PHYLOGENY; PHYLOGEOGRAPHY;

EID: 84982993520     PISSN: 07374038     EISSN: 15371719     Source Type: Journal    
DOI: 10.1093/molbev/msw064     Document Type: Article

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