TransRate: Reference-free quality assessment of de novo transcriptome assemblies

Genome Research

Volumn 26, Issue 8, 2016, Pages 1134-1144

  Smith Unna, Richard ^a   Boursnell, Chris ^a   Patro, Rob ^b   Hibberd, Julian M ^a   Kelly, Steven ^c  

^a UNIVERSITY OF CAMBRIDGE   (United Kingdom)

^b Stony Brook University   (United States)

^c UNIVERSITY OF OXFORD   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

CONTIG; LONG UNTRANSLATED RNA; MESSENGER RNA; NUCLEOTIDE; RIBOSOME RNA; TRANSCRIPTOME;

ALGORITHM; ARTICLE; CALIBRATION; COMPARATIVE STUDY; CONTROLLED STUDY; CORRELATION COEFFICIENT; DE NOVO TRANSCRIPTOME ASSEMBLY; DNA LIBRARY; EXON; FILTRATION; GENETIC REGULATION; GENOME; HUMAN; INTRON RETENTION; MEASUREMENT ACCURACY; MOUSE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; QUALITY CONTROL; REFERENCE FREE QUALITY ASSESSMENT; RICE; TRANSRATE; YEAST; BIOLOGY; GENE EXPRESSION PROFILING; GENETICS; HIGH THROUGHPUT SEQUENCING; PROCEDURES; SOFTWARE;

COMPUTATIONAL BIOLOGY; GENE EXPRESSION PROFILING; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; RNA, LONG NONCODING; RNA, MESSENGER; RNA, RIBOSOMAL; SOFTWARE; TRANSCRIPTOME;

EID: 84982965734     PISSN: 10889051     EISSN: 15495469     Source Type: Journal    
DOI: 10.1101/gr.196469.115     Document Type: Article

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