Prevalence and diversity of IncX plasmids carrying fluoroquinolone and β-lactam resistance genes in Escherichia coli originating from diverse sources and geographical areas

Journal of Antimicrobial Chemotherapy

Volumn 71, Issue 8, 2016, Pages 2118-2124

  Dobiasova, Hana ^a   Dolejska, Monika ^a  

^a UNIVERSITY OF VETERINARY AND PHARMACEUTICAL SCIENCES   (Czech Republic)

Author keywords

[No Author keywords available]

Indexed keywords

AMOXICILLIN PLUS CLAVULANIC ACID; AMPICILLIN; BETA LACTAMASE; CEFALOTIN; CEFOTAXIME; CEFTAZIDIME; CHLORAMPHENICOL; CIPROFLOXACIN; COTRIMOXAZOLE; GENTAMICIN; NUCLEASE S1; PROTEIN PMQR; QUINOLONE DERIVATIVE; STREPTOMYCIN; TETRACYCLINE; UNCLASSIFIED DRUG; BETA LACTAM;

ANTIBIOTIC RESISTANCE; ANTIBIOTIC SENSITIVITY; ARTICLE; BACTERIAL GENE; BACTERIUM ISOLATE; CONJUGATION; CONTROLLED STUDY; ESCHERICHIA COLI; GENETIC VARIABILITY; GEOGRAPHIC DISTRIBUTION; INCX1 PLASMID; INCX2 PLASMID; NONHUMAN; PLASMID; PREVALENCE; PULSED FIELD GEL ELECTROPHORESIS; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; ANALYSIS; ANIMAL; BACTERIUM CONJUGATION; BACTERIUM TRANSFORMATION; CLASSIFICATION; CLUSTER ANALYSIS; DNA SEQUENCE; DRUG EFFECTS; ESCHERICHIA COLI INFECTION; GENETIC VARIATION; GENETICS; GENOTYPE; GLOBAL HEALTH; HORIZONTAL GENE TRANSFER; HUMAN; ISOLATION AND PURIFICATION; MATRIX-ASSISTED LASER DESORPTION-IONIZATION MASS SPECTROMETRY; MICROBIOLOGY; MOLECULAR TYPING; POLYMERASE CHAIN REACTION; VETERINARY; WILD ANIMAL;

ANIMALS; ANIMALS, WILD; BETA-LACTAMS; CLUSTER ANALYSIS; CONJUGATION, GENETIC; DRUG RESISTANCE, BACTERIAL; ELECTROPHORESIS, GEL, PULSED-FIELD; ESCHERICHIA COLI; ESCHERICHIA COLI INFECTIONS; FLUOROQUINOLONES; GENE TRANSFER, HORIZONTAL; GENES, BACTERIAL; GENETIC VARIATION; GENOTYPE; GLOBAL HEALTH; HUMANS; MOLECULAR TYPING; PLASMIDS; POLYMERASE CHAIN REACTION; PREVALENCE; SEQUENCE ANALYSIS, DNA; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; TRANSFORMATION, BACTERIAL;

EID: 84982203503     PISSN: 03057453     EISSN: 14602091     Source Type: Journal    
DOI: 10.1093/jac/dkw144     Document Type: Article

References (40)

1. Carattoli A. Plasmids and the spread of resistance. Int J Med Microbiol 2013; 303: 298-304.
2. Carattoli A. Resistance plasmid families in Enterobacteriaceae. Antimicrob Agents Chemother 2009; 53: 2227-38.
3. Johnson TJ, Bielak EM, Fortini D et al. Expansion of the IncX plasmid family for improved identification and typing of novel plasmids in drug-resistant Enterobacteriaceae. Plasmid 2012; 68: 43-50.
4. Jones CS, Osborne DJ, Stanley J. Molecular comparison of the IncX plasmids allows division into IncX1 and IncX2 subgroups. J Gen Microbiol 1993; 139: 735-41.
5. Grudniak AM, Kraczkiewicz-Dowjat A, Wolska KI et al. Conjugal transfer of plasmid R6K g ori minireplicon derivatives from Escherichia coli to various genera of pathogenic bacteria. Curr Microbiol 2007; 55: 549-53.
6. Wild J, Czyz A, Rakowski SA et al. g Origin plasmids of R6K lineage replicate in diverse genera of Gram-negative bacteria. Ann Microbiol 2004; 54: 471-80.
7. Chen L, Chavda KD, Fraimow HS et al. Complete nucleotide sequences of blaKPC-4- and blaKPC-5-harboring IncN and IncX plasmids from Klebsiella pneumoniae strains isolated in New Jersey. Antimicrob Agents Chemother 2013; 57: 269-76.
8. Kassis-Chikhani N, Frangeul L, Drieux L et al. Complete nucleotide sequence of the first KPC-2- and SHV-12-encoding IncX Plasmid, pKpS90, from Klebsiella pneumoniae. Antimicrob Agents Chemother 2013; 57: 618-20.
9. Du XX, Wang JF, Fu Y et al. Genetic characteristics of blaNDM-1-positive plasmid in Citrobacter freundii isolate separated from a clinical infectious patient. J Med Microbiol 2013; 62: 1332-7.
10. Albrechtova K, Dolejska M, Cizek A et al. Dogs of nomadic pastoralists in northern Kenya are reservoirs of plasmid-mediated cephalosporinand quinolone-resistant Escherichia coli, including pandemic clone B2-O25-ST131. Antimicrob Agents Chemother 2012; 56: 4013-7.
11. Albrechtová K, Literák I, Čížek A. Vyskyt izolá tů Escherichia coli sprodukcí širokospektrých β-laktamáz a plazmidově přená šenou rezistencí k fluorochinolonům u definovaných souborůpsůa koček v České a Slovenské republice. Veterinářství 2014; 64: 277-82. [Article in Czech].
12. Albrechtova K, Kubelova M, Mazancova J et al. High prevalence and variability of CTX-M-15-producing and fluoroquinolone-resistant Escherichia coli observed in stray dogs in rural Angola. Microb Drug Resist 2014; 20: 372-5.
13. Albrechtova K, Papousek I, De Nys H et al. Low rates of antimicrobialresistant Enterobacteriaceae in wildlife in Tai National Park, Cote d'Ivoire, surrounded by villages with high prevalence of multiresistant ESBLproducing Escherichia coli in people and domestic animals. PLoS One 2014; 9: e113548.
14. Halova D, Papousek I, Jamborova I et al. Plasmid-mediated quinolone resistance genes in Enterobacteriaceae from American crows: high prevalence of bacteria with variable qnrB genes. Antimicrob Agents Chemother 2014; 58: 1257-8.
15. Janatova M, Albrechtova K, Petrzelkova KJ et al. Antimicrobial-resistant Enterobacteriaceae from humans and wildlife in Dzanga-Sangha Protected Area, Central African Republic. Vet Microbiol 2014; 171: 422-31.
16. Jamborova I, Dolejska M, Vojtech J et al. Plasmid-mediated resistance to cephalosporins and fluoroquinolones in various Escherichia coli sequence types isolated from rooks wintering in Europe. Appl Environ Microbiol 2015; 81: 648-57.
17. Dolejska M, Masarikova M, Dobiasova H et al. High prevalence of Salmonella and IMP-4-producing Enterobacteriaceae in the silver gull on Five Islands, Australia. J Antimicrob Chemother 2016; 71: 63-70.
18. Literak I, Dolejska M, Radimersky T et al. Antimicrobial-resistant faecal Escherichia coli in wild mammals in central Europe: multiresistant Escherichia coli producing extended-spectrum β-lactamases in wild boars. J Appl Microbiol 2010; 108: 1702-11.
19. Literak I, Dolejska M, Janoszowska D et al. Antibiotic-resistant Escherichia coli bacteria, including strains with genes encoding the extended-spectrum β-lactamase and QnrS, in waterbirds on the Baltic Sea coast of Poland. Appl Environ Microbiol 2010; 76: 8126-34.
20. Literak I, Petro R, Dolejska M et al. Antimicrobial resistance in fecal Escherichia coli isolates from healthy urban children of two age groups in relation to their antibiotic therapy. Antimicrob Agents Chemother 2011; 55: 3005-7.
21. Dolejska M, Duskova E, Rybarikova J et al. Plasmids carrying blaCTX-M-1 and qnr genes in Escherichia coli isolates from an equine clinic and a horseback riding centre. J Antimicrob Chemother 2011; 66: 757-64.
22. Tausova D, Dolejska M, Cizek A et al. Escherichia coli with extendedspectrum β-lactamase and plasmid-mediated quinolone resistance genes in great cormorants and mallards in Central Europe. J Antimicrob Chemother 2012; 67: 1103-7.
23. Papagiannitsis CC, Studentova V, Chudackova E et al. Identification of a New Delhi metallo-β-lactamase-4 (NDM-4)-producing Enterobacter cloacae from a Czech patient previously hospitalized in Sri Lanka. Folia Microbiol 2013; 58: 547-9.
24. Dobiasova H, Dolejska M, Jamborova I et al. Extended spectrum β-lactamase and fluoroquinolone resistance genes and plasmids among Escherichia coli isolates from zoo animals, Czech Republic. FEMS Microbiol Ecol 2013; 85: 604-11.
25. Literak I, Reitschmied T, Bujnakova D et al. Broilers as a source of quinolone-resistant and extraintestinal pathogenic Escherichia coli in the Czech Republic. Microb Drug Resist 2013; 19: 57-63.
26. Poirel L, Walsh TR, Cuvillier V et al. Multiplex PCR for detection of acquired carbapenemase genes. Diagn Microbiol Infect Dis 2011; 70: 119-23.
27. Agerso Y, Aarestrup FM, Pedersen K et al. Prevalence of extendedspectrum cephalosporinase (ESC)-producing Escherichia coli in Danish slaughter pigs and retail meat identified by selective enrichment and association with cephalosporin usage. J Antimicrob Chemother 2012; 67: 582-8.
28. Literak I, Micudova M, Tausova D et al. Plasmid-mediated quinolone resistance genes in fecal bacteria from rooks commonly wintering throughout Europe. Microb Drug Resist 2012; 18: 567-73.
29. Carattoli A, Bertini A, Villa L et al. Identification of plasmids by PCR-based replicon typing. J Microbiol Methods 2005; 63: 219-28.
30. CDC. One-Day (24-28 h) Standardized Laboratory Protocol for Molecular Subtyping of Escherichia coli O157:H7, Non-Typhoidal Salmonella serotypes, and Shigella sonnei by Pulsed Field Gel Electrophoresis (PFGE). CDC, Atlanta, GA, USA: The National Molecular Subtyping Network for Foodborne Disease Surveillance, 2004. http://www.cdc.gov/pulsenet/protocols/ecoli_ salmonella_shigella_protocols.pdf.
31. Clinical and Laboratory Standards Institute. Performance Standards for Antimicrobial Susceptibility Testing: Twenty-first Informational Supplement M100-S21. CLSI, Wayne, PA, USA, 2011.
32. Brown T. Southern Blotting (00:IV:2.9A:2.9.1-2.9.20). In: Current Protocols in Molecular Biology. John Wiley & Sons, Inc., 2001.
33. Sumrall ET, Gallo EB, Aboderin AO et al. Dissemination of the transmissible quinolone-resistance gene qnrS1 by IncX plasmids in Nigeria. PLoS One 2014; 9: e110279.
34. Hoffmann M, Zhao S, Pettengill J et al. Comparative genomic analysis and virulence differences in closely related Salmonella enterica serotype Heidelberg isolates from humans, retail meats, and animals. Genome Biol Evol 2014; 6: 1046-68.
35. Norman A, Hansen LH, She QX et al. Nucleotide sequence of pOLA52: a conjugative IncX1 plasmid from Escherichia coli which enables biofilm formation and multidrug efflux. Plasmid 2008; 60: 59-74.
36. Bielak E, Bergenholtz RD, Jorgensen MS et al. Investigation of diversity of plasmids carrying the blaTEM-52 gene. J Antimicrob Chemother 2011; 66: 2465-74.
37. Matsumoto Y, Izumiya H, Sekizuka T et al. Characterization of blaTEM-52-carrying plasmids of extended-spectrum-β-lactamaseproducing Salmonella enterica isolates from chicken meat with a common supplier in Japan. Antimicrob Agents Chemother 2014; 58: 7545-7.
38. Cattoir V, Poirel L, Aubert C et al. Unexpected occurrence of plasmid-mediated quinolone resistance determinants in environmental Aeromonas spp. Emerg Infect Dis 2008; 14: 231-7.
39. CMY-2 genes in Escherichia coli fromhealthy humans and animals in Tunisia. Microb Drug Resist 2014; 20: 495-500.
40. NDM-4-like genes in the Enterobacteriaceae. J Clin Pathol 2015; 68: 835-8.