메뉴 건너뛰기




Volumn 6, Issue , 2016, Pages

The microbiome of aseptically collected human breast tissue in benign and malignant disease

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; RIBOSOME DNA; RNA 16S;

EID: 84981350540     PISSN: None     EISSN: 20452322     Source Type: Journal    
DOI: 10.1038/srep30751     Document Type: Article
Times cited : (309)

References (38)
  • 1
    • 79952232216 scopus 로고    scopus 로고
    • Global cancer statistics
    • Jemal, A. et al. Global cancer statistics. CA Cancer J. Clin. 61, 69-90 (2011).
    • (2011) CA Cancer J. Clin. , vol.61 , pp. 69-90
    • Jemal, A.1
  • 3
    • 84924860017 scopus 로고    scopus 로고
    • Model for individualized prediction of breast cancer risk after a benign breast biopsy
    • Pankratz, V. S. et al. Model for individualized prediction of breast cancer risk after a benign breast biopsy. J. Clin. Oncol. 33, 923-929 (2015).
    • (2015) J. Clin. Oncol. , vol.33 , pp. 923-929
    • Pankratz, V.S.1
  • 4
    • 84856534859 scopus 로고    scopus 로고
    • Fusobacterium nucleatum infection is prevalent in human colorectal carcinoma
    • Castellarin, M. et al. Fusobacterium nucleatum infection is prevalent in human colorectal carcinoma. Genome Res. 22, 299-306 (2012).
    • (2012) Genome Res. , vol.22 , pp. 299-306
    • Castellarin, M.1
  • 5
    • 84863022950 scopus 로고    scopus 로고
    • Genomic analysis identifies association of Fusobacterium with colorectal carcinoma
    • Kostic, A. D. et al. Genomic analysis identifies association of Fusobacterium with colorectal carcinoma. Genome Res. 22, 292-298 (2012).
    • (2012) Genome Res. , vol.22 , pp. 292-298
    • Kostic, A.D.1
  • 7
    • 84936941938 scopus 로고    scopus 로고
    • Virulence genes are a signature of the microbiome in the colorectal tumor microenvironment
    • Burns, M. B., Lynch, J., Starr, T. K., Knights, D. & Blekhman, R. Virulence genes are a signature of the microbiome in the colorectal tumor microenvironment. Genome Medicine 7, 55 (2015).
    • (2015) Genome Medicine , vol.7 , pp. 55
    • Burns, M.B.1    Lynch, J.2    Starr, T.K.3    Knights, D.4    Blekhman, R.5
  • 8
    • 0027213922 scopus 로고
    • Regression of primary low-grade B-cell gastric lymphoma of mucosa-associated lymphoid tissue type after eradication of Helicobacter pylori
    • Wotherspoon, A. C. et al. Regression of primary low-grade B-cell gastric lymphoma of mucosa-associated lymphoid tissue type after eradication of Helicobacter pylori. Lancet 342, 575-577 (1993).
    • (1993) Lancet , vol.342 , pp. 575-577
    • Wotherspoon, A.C.1
  • 9
    • 48149107365 scopus 로고    scopus 로고
    • Effect of eradication of Helicobacter pylori on incidence of metachronous gastric carcinoma after endoscopic resection of early gastric cancer: An open-label, randomised controlled trial
    • Fukase, K. et al. Effect of eradication of Helicobacter pylori on incidence of metachronous gastric carcinoma after endoscopic resection of early gastric cancer: an open-label, randomised controlled trial. Lancet 372, 392-407 (2008).
    • (2008) Lancet , vol.372 , pp. 392-407
    • Fukase, K.1
  • 10
    • 84899482563 scopus 로고    scopus 로고
    • Immune cell quantitation in normal breast tissue lobules with and without lobulitis
    • Degnim, A. C. et al. Immune cell quantitation in normal breast tissue lobules with and without lobulitis. Breast Cancer Res. Treat. 144, 539-549 (2014).
    • (2014) Breast Cancer Res. Treat. , vol.144 , pp. 539-549
    • Degnim, A.C.1
  • 11
    • 0025871037 scopus 로고
    • Association between infection with Helicobacter pylori and risk of gastric cancer: Evidence from a prospective investigation
    • Forman, D. et al. Association between infection with Helicobacter pylori and risk of gastric cancer: evidence from a prospective investigation. BMJ 302, 1302-1305 (1991).
    • (1991) BMJ , vol.302 , pp. 1302-1305
    • Forman, D.1
  • 12
    • 0035856021 scopus 로고    scopus 로고
    • Helicobacter pylori infection and the development of gastric cancer
    • Uemura, N. et al. Helicobacter pylori infection and the development of gastric cancer. N. Eng. J. Med. 345, 784-789 (2001).
    • (2001) N. Eng. J. Med. , vol.345 , pp. 784-789
    • Uemura, N.1
  • 13
    • 84891473723 scopus 로고    scopus 로고
    • Human gut microbiome and risk for colorectal cancer
    • Ahn, J. et al. Human gut microbiome and risk for colorectal cancer. J. Natl. Cancer Inst. 105, 1907-1911 (2013).
    • (2013) J. Natl. Cancer Inst. , vol.105 , pp. 1907-1911
    • Ahn, J.1
  • 14
    • 84888638819 scopus 로고    scopus 로고
    • The microbiome and cancer
    • Schwabe, R. F. & Jobin, C. The microbiome and cancer. Nat. Rev. Cancer 13, 800-812 (2013).
    • (2013) Nat. Rev. Cancer , vol.13 , pp. 800-812
    • Schwabe, R.F.1    Jobin, C.2
  • 15
    • 0018068315 scopus 로고
    • Effect of intestinal microflora on 2,2-dimethyl-4-aminobiphenyl-induced carcinogenesis in F344 rats
    • Reddy, B. S. & Watanabe, K. Effect of intestinal microflora on 2,2-dimethyl-4-aminobiphenyl-induced carcinogenesis in F344 rats. J. Natl. Cancer Inst. 61, 1269-1271 (1978).
    • (1978) J. Natl. Cancer Inst. , vol.61 , pp. 1269-1271
    • Reddy, B.S.1    Watanabe, K.2
  • 16
    • 79959247053 scopus 로고    scopus 로고
    • Characterization of the diversity and temporal stability of bacterial communities in human milk
    • Hunt, K. M. et al. Characterization of the diversity and temporal stability of bacterial communities in human milk. PLos One 6, e21313 (2011).
    • (2011) PLos One , vol.6 , pp. e21313
    • Hunt, K.M.1
  • 17
    • 84865336911 scopus 로고    scopus 로고
    • The human milk microbiome changes over lactation and is shaped by maternal weight and mode of delivery
    • Cabrera-Rubio, R. et al. The human milk microbiome changes over lactation and is shaped by maternal weight and mode of delivery. Am. J. Clin. Nutr. 96, 544-551 (2012).
    • (2012) Am. J. Clin. Nutr. , vol.96 , pp. 544-551
    • Cabrera-Rubio, R.1
  • 18
    • 0021154237 scopus 로고
    • Studies on the role of intestinal bacteria in metabolism of synthetic and natural steroid hormones
    • Adlercreutz, H., Pulkkinen, M. O., Hamalainen, E. K. & Korpela, J. T. Studies on the role of intestinal bacteria in metabolism of synthetic and natural steroid hormones. J. Steroid Biochem. 20, 217-229 (1984).
    • (1984) J. Steroid Biochem. , vol.20 , pp. 217-229
    • Adlercreutz, H.1    Pulkkinen, M.O.2    Hamalainen, E.K.3    Korpela, J.T.4
  • 19
    • 84871376007 scopus 로고    scopus 로고
    • Fecal microbial determinants of fecal and systemic estrogens and estrogen metabolites: A cross-sectional study
    • Flores, R. et al. Fecal microbial determinants of fecal and systemic estrogens and estrogen metabolites: a cross-sectional study. J. Transl. Med. 10, 253 (2012).
    • (2012) J. Transl. Med. , vol.10 , pp. 253
    • Flores, R.1
  • 22
    • 84865082160 scopus 로고    scopus 로고
    • Associating microbiome composition with environmental covariates using generalized UniFrac distances
    • Chen, J. et al. Associating microbiome composition with environmental covariates using generalized UniFrac distances. Bioinformatics 28, 2106-2113 (2012).
    • (2012) Bioinformatics , vol.28 , pp. 2106-2113
    • Chen, J.1
  • 23
    • 84884127512 scopus 로고    scopus 로고
    • Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
    • Langille, M. G. et al. Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences. Nat. Biotechnol. 31, 814-821 (2013).
    • (2013) Nat. Biotechnol. , vol.31 , pp. 814-821
    • Langille, M.G.1
  • 24
    • 84897449654 scopus 로고    scopus 로고
    • Microbial dysbiosis is associated with human breast cancer
    • Xuan, C. et al. Microbial dysbiosis is associated with human breast cancer. PLos One 9, e83744 (2014).
    • (2014) PLos One , vol.9 , pp. e83744
    • Xuan, C.1
  • 25
    • 84899121453 scopus 로고    scopus 로고
    • Microbiota of human breast tissue
    • Urbaniak, C. et al. Microbiota of human breast tissue. Appl. Environ. Microbiol. 80, 3007-3114 (2014).
    • (2014) Appl. Environ. Microbiol. , vol.80 , pp. 3007-3114
    • Urbaniak, C.1
  • 26
    • 84862276328 scopus 로고    scopus 로고
    • Human Microbiome Project Consortium. Structure function and diversity of the healthy human microbiome
    • Human Microbiome Project Consortium. Structure, function and diversity of the healthy human microbiome. Nature 486, 207-214 (2012).
    • (2012) Nature , vol.486 , pp. 207-214
  • 27
    • 79956359184 scopus 로고    scopus 로고
    • Towards the human colorectal cancer microbiome
    • Marchesi, J. R. et al. Towards the human colorectal cancer microbiome. PLos One 6, e20447 (2011).
    • (2011) PLos One , vol.6 , pp. e20447
    • Marchesi, J.R.1
  • 28
    • 84917705687 scopus 로고    scopus 로고
    • Development of recombinant methioninase to target the general cancer-specific metabolic defect of methionine dependence: A 40-year odyssey
    • Hoffman, R. M. Development of recombinant methioninase to target the general cancer-specific metabolic defect of methionine dependence: a 40-year odyssey. Expert Opin. Biol. Ther. 15, 21-31 (2015).
    • (2015) Expert Opin. Biol. Ther. , vol.15 , pp. 21-31
    • Hoffman, R.M.1
  • 29
    • 84861701419 scopus 로고    scopus 로고
    • A review of methionine dependency and the role of methionine restriction in cancer growth control and life-span extension
    • Cavuoto, P. & Fenech, M. F. A review of methionine dependency and the role of methionine restriction in cancer growth control and life-span extension. Cancer Treat. Rev. 38, 726-736 (2012).
    • (2012) Cancer Treat. Rev. , vol.38 , pp. 726-736
    • Cavuoto, P.1    Fenech, M.F.2
  • 30
    • 77952960280 scopus 로고    scopus 로고
    • Treatment of infectious mastitis during lactation: Antibiotics versus oral administration of Lactobacilli isolated from breast milk
    • Arroyo, R. et al. Treatment of infectious mastitis during lactation: antibiotics versus oral administration of Lactobacilli isolated from breast milk. Clin. Infect. Dis. 50, 1551-1558 (2010).
    • (2010) Clin. Infect. Dis. , vol.50 , pp. 1551-1558
    • Arroyo, R.1
  • 31
    • 84960121427 scopus 로고    scopus 로고
    • Prevention of Infectious Mastitis by Oral Administration of Lactobacillus salivarius PS2 during Late Pregnancy
    • Fernandez, L. et al. Prevention of Infectious Mastitis by Oral Administration of Lactobacillus salivarius PS2 During Late Pregnancy. Clin. Infect. Dis. 62, 568-573 (2016).
    • (2016) Clin. Infect. Dis. , vol.62 , pp. 568-573
    • Fernandez, L.1
  • 32
    • 84928714899 scopus 로고    scopus 로고
    • Gut bacteria require neutrophils to promote mammary tumorigenesis
    • Lakritz, J. R. et al. Gut bacteria require neutrophils to promote mammary tumorigenesis. Oncotarget 6, 9387-9396 (2015).
    • (2015) Oncotarget , vol.6 , pp. 9387-9396
    • Lakritz, J.R.1
  • 33
    • 84931284624 scopus 로고    scopus 로고
    • Prolonged use of a proton pump inhibitor reduces microbial diversity: Implications for Clostridium difficile susceptibility
    • Seto, C. T., Jeraldo, P., Orenstein, R., Chia, N. & DiBaise, J. K. Prolonged use of a proton pump inhibitor reduces microbial diversity: implications for Clostridium difficile susceptibility. Microbiome 2, 42 (2014).
    • (2014) Microbiome , vol.2 , pp. 42
    • Seto, C.T.1    Jeraldo, P.2    Orenstein, R.3    Chia, N.4    DiBaise, J.K.5
  • 34
    • 84918559643 scopus 로고    scopus 로고
    • IM-TORNADO: A tool for comparison of 16S reads from paired-end libraries
    • Jeraldo, P. et al. IM-TORNADO: a tool for comparison of 16S reads from paired-end libraries. PLos One 9, e114804 (2014).
    • (2014) PLos One , vol.9 , pp. e114804
    • Jeraldo, P.1
  • 35
    • 77952243141 scopus 로고    scopus 로고
    • QIIME allows analysis of high-throughput community sequencing data
    • Caporaso, J. G. et al. QIIME allows analysis of high-throughput community sequencing data. Nat. Methods 7, 335-336 (2010).
    • (2010) Nat. Methods , vol.7 , pp. 335-336
    • Caporaso, J.G.1
  • 36
    • 84863981120 scopus 로고    scopus 로고
    • Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms
    • Caporaso, J. G. et al. Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms. Isme J. 6, 1621-1624 (2012).
    • (2012) Isme J. , vol.6 , pp. 1621-1624
    • Caporaso, J.G.1
  • 37
    • 84929159912 scopus 로고    scopus 로고
    • Testing in Microbiome-Profiling Studies with MiRKAT, the Microbiome Regression-Based Kernel Association Test
    • Zhao, N. et al. Testing in Microbiome-Profiling Studies with MiRKAT, the Microbiome Regression-Based Kernel Association Test. Am. J. Hum. Genet. 96, 797-807 (2015).
    • (2015) Am. J. Hum. Genet. , vol.96 , pp. 797-807
    • Zhao, N.1
  • 38
    • 0035478854 scopus 로고    scopus 로고
    • Random forests
    • Breiman, L. Random forests. Mach. Learn. 45, 5-32 (2001).
    • (2001) Mach. Learn. , vol.45 , pp. 5-32
    • Breiman, L.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.