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Volumn 73, Issue 5, 2016, Pages 689-695

Spirosoma fluminis sp. nov., a Gamma–Radiation Resistant Bacterium Isolated from Sediment of the Han River in South Korea

Author keywords

[No Author keywords available]

Indexed keywords

ACID PHOSPHATASE; ALKALINE PHOSPHATASE; ALPHA GALACTOSIDASE; ALPHA GLUCOSIDASE; ALPHA MANNOSIDASE; AMINOPHOSPHOLIPID; AMYGDALIN; ARABINOSE; ARBUTIN; BETA GALACTOSIDASE; BETA GLUCOSIDASE; CATALASE; ESCULIN; ESTERASE; FATTY ACID; GALACTOSE; GENOMIC DNA; GENTIOBIOSE; GLUCOSE; MALTOSE; MANNOSE; MELIBIOSE; N ACETYL BETA GLUCOSAMINIDASE; N ACETYLGLUCOSAMINE; OXIDOREDUCTASE; PHOSPHATIDYLETHANOLAMINE; RNA 16S; SALICIN; SUCROSE; TRYPSIN; BACTERIAL DNA; RIBOSOME DNA;

EID: 84981250420     PISSN: 03438651     EISSN: 14320991     Source Type: Journal    
DOI: 10.1007/s00284-016-1114-9     Document Type: Article
Times cited : (17)

References (30)
  • 1
    • 84907057715 scopus 로고    scopus 로고
    • Spirosoma oryzae sp. nov., isolated from rice soil and emended description of the genus Spirosoma
    • COI: 1:CAS:528:DC%2BC2cXitVGktbzI, PID: 24981323
    • Ahn JH, Weon HY, Kim SJ, Hong SB, Seok SJ, Kwon SW (2014) Spirosoma oryzae sp. nov., isolated from rice soil and emended description of the genus Spirosoma. Int J Syst Evol Microbiol 64:3230–3234
    • (2014) Int J Syst Evol Microbiol , vol.64 , pp. 3230-3234
    • Ahn, J.H.1    Weon, H.Y.2    Kim, S.J.3    Hong, S.B.4    Seok, S.J.5    Kwon, S.W.6
  • 3
    • 84904497463 scopus 로고    scopus 로고
    • Spirosoma arcticum sp. nov., isolated from high arctic glacial till
    • COI: 1:CAS:528:DC%2BC2cXhslChtLnP, PID: 24711591
    • Chang X, Jiang F, Wang T, Kan W, Qu Z, Ren L, Fang C, Peng F (2014) Spirosoma arcticum sp. nov., isolated from high arctic glacial till. Int J Syst Evol Microbiol 64:2233–2237
    • (2014) Int J Syst Evol Microbiol , vol.64 , pp. 2233-2237
    • Chang, X.1    Jiang, F.2    Wang, T.3    Kan, W.4    Qu, Z.5    Ren, L.6    Fang, C.7    Peng, F.8
  • 4
    • 0019490792 scopus 로고
    • Distribution of isoprenoid quinone structural types in bacteria and their taxonomic implications
    • COI: 1:STN:280:DyaL3M3ntVWrtQ%3D%3D, PID: 7022156
    • Collins MD, Jones D (1981) Distribution of isoprenoid quinone structural types in bacteria and their taxonomic implications. Microbiol Rev 45:316–354
    • (1981) Microbiol Rev , vol.45 , pp. 316-354
    • Collins, M.D.1    Jones, D.2
  • 5
    • 84959848780 scopus 로고
    • Maximum likelihood and minimum-steps methods for estimating evolutionary trees from data on discrete characters
    • Felsenstein J (1973) Maximum likelihood and minimum-steps methods for estimating evolutionary trees from data on discrete characters. Syst Zool 22:240–249
    • (1973) Syst Zool , vol.22 , pp. 240-249
    • Felsenstein, J.1
  • 6
    • 0000461280 scopus 로고
    • Confidence limit on phylogenies: an approach using the bootstrap
    • Felsenstein J (1985) Confidence limit on phylogenies: an approach using the bootstrap. Evolution 39:783–791
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 7
    • 79958225108 scopus 로고    scopus 로고
    • Fibrisoma limi gen. nov., sp. nov., a filamentous bacterium isolated from tidal flats
    • COI: 1:CAS:528:DC%2BC3MXpsFWls7o%3D, PID: 20601484
    • Filippini M, Kaech A, Ziegler U, Bagheri HC (2011) Fibrisoma limi gen. nov., sp. nov., a filamentous bacterium isolated from tidal flats. Int J Syst Evol Microbiol 61:1418–1424
    • (2011) Int J Syst Evol Microbiol , vol.61 , pp. 1418-1424
    • Filippini, M.1    Kaech, A.2    Ziegler, U.3    Bagheri, H.C.4
  • 8
    • 66149088872 scopus 로고    scopus 로고
    • Spirosoma spitsbergense sp. nov. and Spirosoma luteum sp. nov., isolated from a high Arctic permafrost soil, and emended description of the genus Spirosoma
    • COI: 1:CAS:528:DC%2BD1MXmtVyqtLg%3D, PID: 19329617
    • Finster KW, Herbert RA, Lomstein BA (2009) Spirosoma spitsbergense sp. nov. and Spirosoma luteum sp. nov., isolated from a high Arctic permafrost soil, and emended description of the genus Spirosoma. Int J Syst Evol Microbiol 59:839–844
    • (2009) Int J Syst Evol Microbiol , vol.59 , pp. 839-844
    • Finster, K.W.1    Herbert, R.A.2    Lomstein, B.A.3
  • 9
    • 84889564556 scopus 로고    scopus 로고
    • Spirosoma endophyticum sp. nov., isolated from Zn- and Cd-accumulating Salix caprea
    • COI: 1:CAS:528:DC%2BC2cXksFWltro%3D, PID: 23907231
    • Fries J, Pfeiffer S, Kuffner M, Sessitsch A (2013) Spirosoma endophyticum sp. nov., isolated from Zn- and Cd-accumulating Salix caprea. Int J Syst Evol Microbiol 63:4586–4590
    • (2013) Int J Syst Evol Microbiol , vol.63 , pp. 4586-4590
    • Fries, J.1    Pfeiffer, S.2    Kuffner, M.3    Sessitsch, A.4
  • 11
    • 84988897327 scopus 로고    scopus 로고
    • BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • COI: 1:CAS:528:DC%2BD3cXhtVyjs7Y%3D
    • Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41:95–98
    • (1999) Nucleic Acids Symp Ser , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 12
    • 84947589639 scopus 로고    scopus 로고
    • Spirosoma fluviale sp. nov., isolated from river water
    • COI: 1:CAS:528:DC%2BC2MXitVKhsb7K, PID: 26297023
    • Hatayama K, Kuno T (2015) Spirosoma fluviale sp. nov., isolated from river water. Int J Syst Evol Microbiol 65:3447–3450
    • (2015) Int J Syst Evol Microbiol , vol.65 , pp. 3447-3450
    • Hatayama, K.1    Kuno, T.2
  • 13
    • 0030435636 scopus 로고    scopus 로고
    • Comparative lipoquinone analysis of influent sewage and activated sludge by high-performance liquid chromatography and photodiode array detection
    • COI: 1:CAS:528:DyaK2sXht1SisrY%3D
    • Hiraishi A, Ueda Y, Ishihara J, Mori T (1996) Comparative lipoquinone analysis of influent sewage and activated sludge by high-performance liquid chromatography and photodiode array detection. J Gen Appl Microbiol 42:457–469
    • (1996) J Gen Appl Microbiol , vol.42 , pp. 457-469
    • Hiraishi, A.1    Ueda, Y.2    Ishihara, J.3    Mori, T.4
  • 14
    • 84945275170 scopus 로고    scopus 로고
    • Spirosoma pulveris sp. nov., a bacterium isolated from a dust sample collected at Chungnam province
    • COI: 1:CAS:528:DC%2BC2MXhslyksrzO, PID: 26502958
    • Joo ES, Lee JJ, Cha S, Jheong W, Seo T, Lim S, Sw Jeong, Srinivasan S (2015) Spirosoma pulveris sp. nov., a bacterium isolated from a dust sample collected at Chungnam province. South Korea. J Microbiol 53:750–755
    • (2015) South Korea. J Microbiol , vol.53 , pp. 750-755
    • Joo, E.S.1    Lee, J.J.2    Cha, S.3    Jheong, W.4    Seo, T.5    Lim, S.6    Sw, J.7    Srinivasan, S.8
  • 15
    • 0000732090 scopus 로고
    • Evolution of protein molecules
    • Munro HN, (ed), Academic Press, New York
    • Jukes TH, Cantor CR (1969) Evolution of protein molecules. In: Munro HN (ed) Mammalian protein metabolism. Academic Press, New York, pp 21–132
    • (1969) Mammalian protein metabolism , pp. 21-132
    • Jukes, T.H.1    Cantor, C.R.2
  • 17
    • 77956800518 scopus 로고
    • Lipid and cell-wall analysis in bacterial systematics
    • COI: 1:CAS:528:DyaL1cXitFylt78%3D
    • Komagata K, Suzuki K (1987) Lipid and cell-wall analysis in bacterial systematics. Methods Microbiol 19:161–207
    • (1987) Methods Microbiol , vol.19 , pp. 161-207
    • Komagata, K.1    Suzuki, K.2
  • 19
    • 84932633066 scopus 로고    scopus 로고
    • Spirosoma montaniterrae sp. nov., an ultraviolet and gamma radiation-resistant bacterium isolated from mountain soil
    • COI: 1:CAS:528:DC%2BC2MXhtFCqs7%2FF, PID: 26115990
    • Lee JJ, Kang MS, Joo ES, Kim MK, Srinivasan S (2015) Spirosoma montaniterrae sp. nov., an ultraviolet and gamma radiation-resistant bacterium isolated from mountain soil. J Microbiol 53:429–434
    • (2015) J Microbiol , vol.53 , pp. 429-434
    • Lee, J.J.1    Kang, M.S.2    Joo, E.S.3    Kim, M.K.4    Srinivasan, S.5
  • 20
    • 84905180160 scopus 로고    scopus 로고
    • Spirosoma radiotolerans sp. nov., a gamma-radiation-resistant bacterium isolated from gamma ray-irradiated soil
    • COI: 1:CAS:528:DC%2BC2cXmsVOjsbw%3D, PID: 24748440
    • Lee JJ, Srinivasan S, Lim S, Joe M, Im S, Bae SI, Park KR, Han JH, Park SH, Joo BM et al (2014) Spirosoma radiotolerans sp. nov., a gamma-radiation-resistant bacterium isolated from gamma ray-irradiated soil. Curr Microbiol 69:286–291
    • (2014) Curr Microbiol , vol.69 , pp. 286-291
    • Lee, J.J.1    Srinivasan, S.2    Lim, S.3    Joe, M.4    Im, S.5    Bae, S.I.6    Park, K.R.7    Han, J.H.8    Park, S.H.9    Joo, B.M.10
  • 21
    • 0000198211 scopus 로고
    • Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography
    • COI: 1:CAS:528:DyaL1MXltFWku7o%3D
    • Mesbah M, Premachandran U, Whitman WB (1989) Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39:159–167
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 159-167
    • Mesbah, M.1    Premachandran, U.2    Whitman, W.B.3
  • 23
    • 0023375195 scopus 로고
    • The neighbor-joining method: a new method for reconstructing phylogenetic trees
    • COI: 1:STN:280:DyaL1c7ovFSjsA%3D%3D, PID: 3447015
    • Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406–425
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 25
    • 0028028182 scopus 로고
    • Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
    • COI: 1:CAS:528:DyaK2MXitFCnsb4%3D
    • Stackebrandt E, Goebel BM (1994) Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44:846–849
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 846-849
    • Stackebrandt, E.1    Goebel, B.M.2
  • 26
    • 84982538593 scopus 로고
    • Determination of DNA base composition by reversed phase high-performance liquid chromatography
    • COI: 1:CAS:528:DyaL2MXitVGktg%3D%3D
    • Tamaoka J, Komagata K (1984) Determination of DNA base composition by reversed phase high-performance liquid chromatography. FEMS Microbiol Lett 25:125–128
    • (1984) FEMS Microbiol Lett , vol.25 , pp. 125-128
    • Tamaoka, J.1    Komagata, K.2
  • 27
    • 84890330527 scopus 로고    scopus 로고
    • MEGA6: molecular evolutionary genetics analysis version 6.0
    • COI: 1:CAS:528:DC%2BC3sXhvVKhurzP, PID: 24132122
    • Tamura K, Stecher G, Peterson D, Filipski A, Kumar S (2013) MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol 30:2725–2729
    • (2013) Mol Biol Evol , vol.30 , pp. 2725-2729
    • Tamura, K.1    Stecher, G.2    Peterson, D.3    Filipski, A.4    Kumar, S.5
  • 29
    • 0031574072 scopus 로고    scopus 로고
    • The Clustal_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The Clustal_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 24:4876–4882
    • (1997) Nucleic Acids Res , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 30
    • 0026067797 scopus 로고
    • 16S ribosomal DNA amplification for phylogenetic study
    • COI: 1:CAS:528:DyaK3MXhsl2lurY%3D, PID: 1987160
    • Weisburg WG, Barns SM, Pelletier DA, Lane DJ (1991) 16S ribosomal DNA amplification for phylogenetic study. J Bacteriol 173:697–703
    • (1991) J Bacteriol , vol.173 , pp. 697-703
    • Weisburg, W.G.1    Barns, S.M.2    Pelletier, D.A.3    Lane, D.J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.