-
2
-
-
84873361483
-
The IRP1-HIF-2α axis coordinates iron and oxygen sensing with erythropoiesis and iron absorption
-
Anderson SA, Nizzi CP, Chang YI, Deck KM, Schmidt PJ, Galy B, Damnernsawad A, Broman AT, Kendziorski C, Hentze MW, et al. 2013. The IRP1-HIF-2α axis coordinates iron and oxygen sensing with erythropoiesis and iron absorption. Cell Metab 17: 282-290.
-
(2013)
Cell Metab
, vol.17
, pp. 282-290
-
-
Anderson, S.A.1
Nizzi, C.P.2
Chang, Y.I.3
Deck, K.M.4
Schmidt, P.J.5
Galy, B.6
Damnernsawad, A.7
Broman, A.T.8
Kendziorski, C.9
Hentze, M.W.10
-
3
-
-
0028266818
-
Evidence that the pathway of transferrin receptor mRNA degradation involves an endonucleolytic cleavage within the 3′ UTR and does not involve poly(A) tail shortening
-
Binder R, Horowitz JA, Basilion JP, Koeller DM, Klausner RD, Harford JB. 1994. Evidence that the pathway of transferrin receptor mRNA degradation involves an endonucleolytic cleavage within the 3′ UTR and does not involve poly(A) tail shortening. EMBO J 13: 1969-1980.
-
(1994)
EMBO J
, vol.13
, pp. 1969-1980
-
-
Binder, R.1
Horowitz, J.A.2
Basilion, J.P.3
Koeller, D.M.4
Klausner, R.D.5
Harford, J.B.6
-
4
-
-
75949108066
-
Galaxy: A web-based genome analysis tool for experimentalists
-
Blankenberg D, Von Kuster G, Coraor N, Ananda G, Lazarus R, Mangan M, Nekrutenko A, Taylor J. 2010. Galaxy: a web-based genome analysis tool for experimentalists. Curr Protoc Mol Biol 89: 19.10.1-19.10.21.
-
(2010)
Curr Protoc Mol Biol
, vol.89
, pp. 19.10.1-19.10.21
-
-
Blankenberg, D.1
Von Kuster, G.2
Coraor, N.3
Ananda, G.4
Lazarus, R.5
Mangan, M.6
Nekrutenko, A.7
Taylor, J.8
-
5
-
-
84959471006
-
Regulators of iron homeostasis: New players in metabolism, cell death, and disease
-
Bogdan RA, Miyazawa M, Hashimoto K, Tsuji Y. 2016. Regulators of iron homeostasis: new players in metabolism, cell death, and disease. Trends Biochem Sci 41: 274-286.
-
(2016)
Trends Biochem Sci
, vol.41
, pp. 274-286
-
-
Bogdan, R.A.1
Miyazawa, M.2
Hashimoto, K.3
Tsuji, Y.4
-
6
-
-
0023882711
-
Iron-responsive elements: Regulatory RNA sequences that control mRNA levels and translation
-
Casey JL, Hentze MW, Koeller DM, Caughman SW, Rouault TA, Klausner RD, Harford JB. 1988. Iron-responsive elements: regulatory RNA sequences that control mRNA levels and translation. Science 240: 924-928.
-
(1988)
Science
, vol.240
, pp. 924-928
-
-
Casey, J.L.1
Hentze, M.W.2
Koeller, D.M.3
Caughman, S.W.4
Rouault, T.A.5
Klausner, R.D.6
Harford, J.B.7
-
7
-
-
0024819020
-
Iron regulation of transferrin receptor mRNA levels requires iron-responsive elements and a rapid turnover determinant in the 3′ untranslated region of the mRNA
-
Casey JL, Koeller DM, Ramin VC, Klausner RD, Harford JB. 1989. Iron regulation of transferrin receptor mRNA levels requires iron-responsive elements and a rapid turnover determinant in the 3′ untranslated region of the mRNA. EMBO J 8: 3693-3699.
-
(1989)
EMBO J
, vol.8
, pp. 3693-3699
-
-
Casey, J.L.1
Koeller, D.M.2
Ramin, V.C.3
Klausner, R.D.4
Harford, J.B.5
-
8
-
-
37449009448
-
Iron regulatory proteins are essential for intestinal function and control key iron absorption molecules in the duodenum
-
Galy B, Ferring-Appel D, Kaden S, Grone HJ, Hentze MW. 2008. Iron regulatory proteins are essential for intestinal function and control key iron absorption molecules in the duodenum. Cell Metab 7: 79-85.
-
(2008)
Cell Metab
, vol.7
, pp. 79-85
-
-
Galy, B.1
Ferring-Appel, D.2
Kaden, S.3
Grone, H.J.4
Hentze, M.W.5
-
9
-
-
25844449770
-
Galaxy: A platform for interactive large-scale genome analysis
-
Giardine B, Riemer C, Hardison RC, Burhans R, Elnitski L, Shah P, Zhang Y, Blankenberg D, Albert I, Taylor J, et al. 2005. Galaxy: a platform for interactive large-scale genome analysis. Genome Res 15: 1451-1455.
-
(2005)
Genome Res
, vol.15
, pp. 1451-1455
-
-
Giardine, B.1
Riemer, C.2
Hardison, R.C.3
Burhans, R.4
Elnitski, L.5
Shah, P.6
Zhang, Y.7
Blankenberg, D.8
Albert, I.9
Taylor, J.10
-
10
-
-
77955801615
-
Galaxy: A comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences
-
Goecks J, Nekrutenko A, Taylor J, Galaxy T. 2010. Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences. Genome Biol 11: R86.
-
(2010)
Genome Biol
, vol.11
, pp. R86
-
-
Goecks, J.1
Nekrutenko, A.2
Taylor, J.3
Galaxy, T.4
-
11
-
-
84955059552
-
Iron homeostasis in health and disease
-
Gozzelino R, Arosio P. 2016. Iron homeostasis in health and disease. Int J Mol Sci 17: 1-14.
-
(2016)
Int J Mol Sci
, vol.17
, pp. 1-14
-
-
Gozzelino, R.1
Arosio, P.2
-
12
-
-
0027131432
-
Recombinant iron-regulatory factor functions as an iron-responsive-element-binding protein, a translational repressor and an aconitase. A functional assay for translational repression and direct demonstration of the iron switch
-
Gray NK, Quick S, Goossen B, Constable A, Hirling H, Kuhn LC, Hentze MW. 1993. Recombinant iron-regulatory factor functions as an iron-responsive-element-binding protein, a translational repressor and an aconitase. A functional assay for translational repression and direct demonstration of the iron switch. Eur J Biochem 218: 657-667.
-
(1993)
Eur J Biochem
, vol.218
, pp. 657-667
-
-
Gray, N.K.1
Quick, S.2
Goossen, B.3
Constable, A.4
Hirling, H.5
Kuhn, L.C.6
Hentze, M.W.7
-
13
-
-
0029866604
-
Iron regulatory proteins 1 and 2 bind distinct sets of RNA target sequences
-
Henderson BR, Menotti E, Kuhn LC. 1996. Iron regulatory proteins 1 and 2 bind distinct sets of RNA target sequences. J Biol Chem 271: 4900-4908.
-
(1996)
J Biol Chem
, vol.271
, pp. 4900-4908
-
-
Henderson, B.R.1
Menotti, E.2
Kuhn, L.C.3
-
14
-
-
0026846376
-
The secondary structure of the regulatory region of the transferrin receptor mRNA deduced by enzymatic cleavage
-
Horowitz JA, Harford JB. 1992. The secondary structure of the regulatory region of the transferrin receptor mRNA deduced by enzymatic cleavage. New Biol 4: 330-338.
-
(1992)
New Biol
, vol.4
, pp. 330-338
-
-
Horowitz, J.A.1
Harford, J.B.2
-
15
-
-
0024669905
-
A cytosolic protein binds to structural elements within the iron regulatory region of the transferrin receptor mRNA
-
Koeller DM, Casey JL, Hentze MW, Gerhardt EM, Chan LN, Klausner RD, Harford JB. 1989. A cytosolic protein binds to structural elements within the iron regulatory region of the transferrin receptor mRNA. Proc Natl Acad Sci 86: 3574-3578.
-
(1989)
Proc Natl Acad Sci
, vol.86
, pp. 3574-3578
-
-
Koeller, D.M.1
Casey, J.L.2
Hentze, M.W.3
Gerhardt, E.M.4
Chan, L.N.5
Klausner, R.D.6
Harford, J.B.7
-
16
-
-
80455179726
-
iCLIP-transcriptome-wide mapping of protein-RNA interactions with individual nucleotide resolution
-
Konig J, Zarnack K, Rot G, Curk T, Kayikci M, Zupan B, Turner DJ, Luscombe NM, Ule J. 2011. iCLIP-transcriptome-wide mapping of protein-RNA interactions with individual nucleotide resolution. J Vis Exp 50: e2638.
-
(2011)
J Vis Exp
, vol.50
, pp. e2638
-
-
Konig, J.1
Zarnack, K.2
Rot, G.3
Curk, T.4
Kayikci, M.5
Zupan, B.6
Turner, D.J.7
Luscombe, N.M.8
Ule, J.9
-
17
-
-
84923096246
-
Iron regulatory proteins and their role in controlling iron metabolism
-
Kuhn LC. 2015. Iron regulatory proteins and their role in controlling iron metabolism. Metallomics 7: 232-243.
-
(2015)
Metallomics
, vol.7
, pp. 232-243
-
-
Kuhn, L.C.1
-
18
-
-
56549105330
-
HITS-CLIP yields genome-wide insights into brain alternative RNA processing
-
Licatalosi DD, Mele A, Fak JJ, Ule J, Kayikci M, Chi SW, Clark TA, Schweitzer AC, Blume JE, Wang X, et al. 2008. HITS-CLIP yields genome-wide insights into brain alternative RNA processing. Nature 456: 464-469.
-
(2008)
Nature
, vol.456
, pp. 464-469
-
-
Licatalosi, D.D.1
Mele, A.2
Fak, J.J.3
Ule, J.4
Kayikci, M.5
Chi, S.W.6
Clark, T.A.7
Schweitzer, A.C.8
Blume, J.E.9
Wang, X.10
-
19
-
-
84861852253
-
2+ binds iron responsive element-RNA, selectively changing protein-binding affinities and regulating mRNA repression and activation
-
2+ binds iron responsive element-RNA, selectively changing protein-binding affinities and regulating mRNA repression and activation. Proc Natl Acad Sci 109: 8417-8422.
-
(2012)
Proc Natl Acad Sci
, vol.109
, pp. 8417-8422
-
-
Ma, J.1
Haldar, S.2
Khan, M.A.3
Sharma, S.D.4
Merrick, W.C.5
Theil, E.C.6
Goss, D.J.7
-
20
-
-
10844282789
-
Mammalian tissue oxygen levels modulate iron-regulatory protein activities in vivo
-
Meyron-Holtz EG, Ghosh MC, Rouault TA. 2004. Mammalian tissue oxygen levels modulate iron-regulatory protein activities in vivo. Science 306: 2087-2090.
-
(2004)
Science
, vol.306
, pp. 2087-2090
-
-
Meyron-Holtz, E.G.1
Ghosh, M.C.2
Rouault, T.A.3
-
21
-
-
0024819449
-
Synthesis of small RNAs using T7 RNA polymerase
-
Milligan JF, Uhlenbeck OC. 1989. Synthesis of small RNAs using T7 RNA polymerase. Methods Enzymol 180: 51-62.
-
(1989)
Methods Enzymol
, vol.180
, pp. 51-62
-
-
Milligan, J.F.1
Uhlenbeck, O.C.2
-
22
-
-
0029129682
-
Use of ultra stable UNCG tetraloop hairpins to fold RNA structures: Thermodynamic and spectroscopic applications
-
Molinaro M, Tinoco I Jr. 1995. Use of ultra stable UNCG tetraloop hairpins to fold RNA structures: thermodynamic and spectroscopic applications. Nucleic Acids Res 23: 3056-3063.
-
(1995)
Nucleic Acids Res
, vol.23
, pp. 3056-3063
-
-
Molinaro, M.1
Tinoco, I.2
-
23
-
-
0032160381
-
IRP-1 binding to ferritin mRNA prevents the recruitment of the small ribosomal subunit by the cap-binding complex eIF4F
-
Muckenthaler M, Gray NK, Hentze MW. 1998. IRP-1 binding to ferritin mRNA prevents the recruitment of the small ribosomal subunit by the cap-binding complex eIF4F. Mol Cell 2: 383-388.
-
(1998)
Mol Cell
, vol.2
, pp. 383-388
-
-
Muckenthaler, M.1
Gray, N.K.2
Hentze, M.W.3
-
24
-
-
0024276911
-
A stem-loop in the 3′ untranslated region mediates iron-dependent regulation of transferrin receptor mRNA stability in the cytoplasm
-
Mullner EW, Kuhn LC. 1988. A stem-loop in the 3′ untranslated region mediates iron-dependent regulation of transferrin receptor mRNA stability in the cytoplasm. Cell 53: 815-825.
-
(1988)
Cell
, vol.53
, pp. 815-825
-
-
Mullner, E.W.1
Kuhn, L.C.2
-
25
-
-
70350576223
-
An E3 ligase possessing an iron-responsive hemerythrin domain is a regulator of iron homeostasis
-
Salahudeen AA, Thompson JW, Ruiz JC, Ma HW, Kinch LN, Li Q, Grishin NV, Bruick RK. 2009. An E3 ligase possessing an iron-responsive hemerythrin domain is a regulator of iron homeostasis. Science 326: 722-726.
-
(2009)
Science
, vol.326
, pp. 722-726
-
-
Salahudeen, A.A.1
Thompson, J.W.2
Ruiz, J.C.3
Ma, H.W.4
Kinch, L.N.5
Li, Q.6
Grishin, N.V.7
Bruick, R.K.8
-
26
-
-
0030842653
-
Probing the structure of the regulatory region of human transferrin receptor messenger RNA and its interaction with iron regulatory protein-1
-
Schlegl J, Gegout V, Schlager B, Hentze MW, Westhof E, Ehresmann C, Ehresmann B, Romby P. 1997. Probing the structure of the regulatory region of human transferrin receptor messenger RNA and its interaction with iron regulatory protein-1. RNA 3: 1159-1172.
-
(1997)
RNA
, vol.3
, pp. 1159-1172
-
-
Schlegl, J.1
Gegout, V.2
Schlager, B.3
Hentze, M.W.4
Westhof, E.5
Ehresmann, C.6
Ehresmann, B.7
Romby, P.8
-
27
-
-
84927154486
-
An overview of molecular basis of iron metabolism regulation and the associated pathologies
-
Silva B, Faustino P. 2015. An overview of molecular basis of iron metabolism regulation and the associated pathologies. Biochim Biophys Acta 1852: 1347-1359.
-
(2015)
Biochim Biophys Acta
, vol.1852
, pp. 1347-1359
-
-
Silva, B.1
Faustino, P.2
-
28
-
-
33645307993
-
Complete loss of iron regulatory proteins 1 and 2 prevents viability of murine zygotes beyond the blastocyst stage of embryonic development
-
Smith SR, Ghosh MC, Ollivierre-Wilson H, Hang Tong W, Rouault TA. 2006. Complete loss of iron regulatory proteins 1 and 2 prevents viability of murine zygotes beyond the blastocyst stage of embryonic development. Blood Cells Mol Dis 36: 283-287.
-
(2006)
Blood Cells Mol Dis
, vol.36
, pp. 283-287
-
-
Smith, S.R.1
Ghosh, M.C.2
Ollivierre-Wilson, H.3
Hang Tong, W.4
Rouault, T.A.5
-
29
-
-
0242497663
-
CLIP identifies Nova-regulated RNA networks in the brain
-
Ule J, Jensen KB, Ruggiu M, Mele A, Ule A, Darnell RB. 2003. CLIP identifies Nova-regulated RNA networks in the brain. Science 302: 1212-1215.
-
(2003)
Science
, vol.302
, pp. 1212-1215
-
-
Ule, J.1
Jensen, K.B.2
Ruggiu, M.3
Mele, A.4
Ule, A.5
Darnell, R.B.6
-
30
-
-
70350613915
-
Control of iron homeostasis by an iron-regulated ubiquitin ligase
-
Vashisht AA, Zumbrennen KB, Huang X, Powers DN, Durazo A, Sun D, Bhaskaran N, Persson A, Uhlen M, Sangfelt O, et al. 2009. Control of iron homeostasis by an iron-regulated ubiquitin ligase. Science 326: 718-721.
-
(2009)
Science
, vol.326
, pp. 718-721
-
-
Vashisht, A.A.1
Zumbrennen, K.B.2
Huang, X.3
Powers, D.N.4
Durazo, A.5
Sun, D.6
Bhaskaran, N.7
Persson, A.8
Uhlen, M.9
Sangfelt, O.10
-
31
-
-
67649840910
-
CLIP: Construction of cDNA libraries for high-throughput sequencing from RNAs cross-linked to proteins in vivo
-
Wang Z, Tollervey J, Briese M, Turner D, Ule J. 2009. CLIP: construction of cDNA libraries for high-throughput sequencing from RNAs cross-linked to proteins in vivo. Methods 48: 287-293.
-
(2009)
Methods
, vol.48
, pp. 287-293
-
-
Wang, Z.1
Tollervey, J.2
Briese, M.3
Turner, D.4
Ule, J.5
-
32
-
-
84861319900
-
UNAC tetraloops: To what extent do they mimic GNRA tetraloops?
-
Zhao Q, Huang HC, Nagaswamy U, Xia Y, Gao X, Fox GE. 2012. UNAC tetraloops: to what extent do they mimic GNRA tetraloops? Biopolymers 97: 617-628.
-
(2012)
Biopolymers
, vol.97
, pp. 617-628
-
-
Zhao, Q.1
Huang, H.C.2
Nagaswamy, U.3
Xia, Y.4
Gao, X.5
Fox, G.E.6
|