메뉴 건너뛰기




Volumn 5, Issue JUN, 2014, Pages

Transcriptomic landscape of prophase I sunflower male meiocytes

Author keywords

HA89; Meiocytes; Meiosis; Meiotic genes; RNA seq; Sunflower; Transcriptome

Indexed keywords


EID: 84979500226     PISSN: None     EISSN: 1664462X     Source Type: Journal    
DOI: 10.3389/fpls.2014.00277     Document Type: Article
Times cited : (14)

References (77)
  • 1
    • 65349160381 scopus 로고    scopus 로고
    • Phylogenetic analysis, subcellular localization, and expression patterns of RPD3/HDA1 family histone deacetylases in plants
    • Alinsug, M. V., Yu, C.-W., and Wu, K. (2009). Phylogenetic analysis, subcellular localization, and expression patterns of RPD3/HDA1 family histone deacetylases in plants. BMC Plant Biol. 9:37. doi:10.1186/1471-2229-9-37
    • (2009) BMC Plant Biol , vol.9 , pp. 37
    • Alinsug, M.V.1    Yu, C.-W.2    Wu, K.3
  • 2
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
    • Altschul, S. F., Madden, T. L., Schäffer, A. A., Zhang, J., Zhang, Z., Miller, W., et al. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucl. Acids Res. 25, 3389-3402. doi:10.1093/nar/25.17.3389
    • (1997) Nucl. Acids Res , vol.25 , pp. 3389-3402
    • Altschul, S.F.1    Madden, T.L.2    Schäffer, A.A.3    Zhang, J.4    Zhang, Z.5    Miller, W.6
  • 3
    • 0141919264 scopus 로고    scopus 로고
    • A meiotic time-course for Arabidopsis thaliana
    • Armstrong, S. J., Franklin, F. C. H., and Jones, G. H. (2003). A meiotic time-course for Arabidopsis thaliana. Sex. Plant Reprod. 16, 141-149. doi:10.1007/s00497-003-0186-4
    • (2003) Sex. Plant Reprod , vol.16 , pp. 141-149
    • Armstrong, S.J.1    Franklin, F.C.H.2    Jones, G.H.3
  • 4
    • 77955504378 scopus 로고    scopus 로고
    • Statistical design and analysis of rna sequencing data
    • Auer, P. L., and Doerge, R. (2010). Statistical design and analysis of rna sequencing data. Genetics 185, 405-416. doi:10.1534/genetics.110.114983
    • (2010) Genetics , vol.185 , pp. 405-416
    • Auer, P.L.1    Doerge, R.2
  • 5
    • 0030993490 scopus 로고    scopus 로고
    • Interactions among genes regulating ovule development in arabidopsis thaliana
    • Baker, S. C., Robinson-Beers, K., Villanueva, J. M., Gaiser, J. C., and Gasser, C. S. (1997). Interactions among genes regulating ovule development in arabidopsis thaliana. Genetics 145, 1109.
    • (1997) Genetics , vol.145 , pp. 1109
    • Baker, S.C.1    Robinson-Beers, K.2    Villanueva, J.M.3    Gaiser, J.C.4    Gasser, C.S.5
  • 6
    • 84856625798 scopus 로고    scopus 로고
    • High-resolution view of the yeast meiotic program revealed by ribosome profiling
    • Brar, G. A., Yassour, M., Friedman, N., Regev, A., Ingolia, N. T., and Weissman, J. S. (2012). High-resolution view of the yeast meiotic program revealed by ribosome profiling. Science 335, 552-557. doi:10.1126/science.1215110
    • (2012) Science , vol.335 , pp. 552-557
    • Brar, G.A.1    Yassour, M.2    Friedman, N.3    Regev, A.4    Ingolia, N.T.5    Weissman, J.S.6
  • 7
    • 0028469542 scopus 로고
    • Chiasma function
    • Carpenter, A. (1994). Chiasma function. Cell 77, 959-962. doi:10.1016/0092-8674(94)90434-0
    • (1994) Cell , vol.77 , pp. 959-962
    • Carpenter, A.1
  • 8
    • 0034029174 scopus 로고    scopus 로고
    • Completion of meiosis in Drosophila oocytes requires transcriptional control by grauzone, a new zinc finger protein
    • Available online at
    • Chen, B., Harms, E., Chu, T., Henrion, G., and Strickland, S. (2000). Completion of meiosis in Drosophila oocytes requires transcriptional control by grauzone, a new zinc finger protein. Development 127, 1243-1251. Available online at: http://dev.biologists.org/content/127/6/1243.short
    • (2000) Development , vol.127 , pp. 1243-1251
    • Chen, B.1    Harms, E.2    Chu, T.3    Henrion, G.4    Strickland, S.5
  • 9
    • 78650096170 scopus 로고    scopus 로고
    • Meiosis-specific gene discovery in plants: RNA-Seq applied to isolated Arabidopsis male meiocytes
    • Chen, C., Farmer, A. D., Langley, R. J., Mudge, J., Crow, J. A., May, G. D., et al. (2010). Meiosis-specific gene discovery in plants: RNA-Seq applied to isolated Arabidopsis male meiocytes. BMC Plant Biol. 10:280. doi:10.1186/1471-2229-10-280
    • (2010) BMC Plant Biol , vol.10 , pp. 280
    • Chen, C.1    Farmer, A.D.2    Langley, R.J.3    Mudge, J.4    Crow, J.A.5    May, G.D.6
  • 10
    • 0036337077 scopus 로고    scopus 로고
    • The arabidopsis atk1 gene is required for spindle morphogenesis in male meiosis
    • Available online at
    • Chen, C., Marcus, A., Li, W., Hu, Y., Calzada, J.-P. V., Grossniklaus, U., et al. (2002). The arabidopsis atk1 gene is required for spindle morphogenesis in male meiosis. Development 129, 2401-2409. Available online at: http://dev.biologists.org/content/129/10/2401.short
    • (2002) Development , vol.129 , pp. 2401-2409
    • Chen, C.1    Marcus, A.2    Li, W.3    Hu, Y.4    Calzada, J.-P.V.5    Grossniklaus, U.6
  • 11
    • 84884645267 scopus 로고    scopus 로고
    • Analyzing the meiotic transcriptome using isolated meiocytes of Arabidopsis thaliana
    • eds W. Pawlowski, M. Grelon, and S. Armstrong (New York, NY: Humana Press
    • Chen, C., and Retzel, E. (2013). “Analyzing the meiotic transcriptome using isolated meiocytes of Arabidopsis thaliana,” in Plant Meiosis: Methods and Protocols (Methods in Molecular Biology), eds W. Pawlowski, M. Grelon, and S. Armstrong (New York, NY: Humana Press), 203-213.
    • (2013) Plant Meiosis: Methods and Protocols (Methods in Molecular Biology) , pp. 203-213
    • Chen, C.1    Retzel, E.2
  • 12
    • 79951806990 scopus 로고    scopus 로고
    • Retinoblastoma protein is essential for early meiotic events in arabidopsis
    • Chen, Z., Higgins, J. D., Hui, J. T. L., Li, J., Franklin, F. C. H., and Berger, F. (2011). Retinoblastoma protein is essential for early meiotic events in arabidopsis. EMBO J. 30, 744-755. doi:10.1038/emboj.2010.344
    • (2011) EMBO J , vol.30 , pp. 744-755
    • Chen, Z.1    Higgins, J.D.2    Hui, J.T.L.3    Li, J.4    Franklin, F.C.H.5    Berger, F.6
  • 13
    • 33846409010 scopus 로고    scopus 로고
    • Changes in gene expression during male meiosis in Petunia hybrida
    • Cnudde, F., Hedatale, V., de Jong, H., Pierson, E. S., Rainey, D. Y., Zabeau, M., et al. (2006). Changes in gene expression during male meiosis in Petunia hybrida. Chromosome Res. 14, 919-932. doi:10.1007/s10577-006-1099-5
    • (2006) Chromosome Res , vol.14 , pp. 919-932
    • Cnudde, F.1    Hedatale, V.2    De Jong, H.3    Pierson, E.S.4    Rainey, D.Y.5    Zabeau, M.6
  • 14
    • 33846927931 scopus 로고    scopus 로고
    • Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
    • Crismani, W., Baumann, U., Sutton, T., Shirley, N., Webster, T., Spangenberg, G., et al. (2006). Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat. BMC Genomics 7:267. doi:10.1186/1471-2164-7-267
    • (2006) BMC Genomics , vol.7 , pp. 267
    • Crismani, W.1    Baumann, U.2    Sutton, T.3    Shirley, N.4    Webster, T.5    Spangenberg, G.6
  • 15
    • 79955680277 scopus 로고    scopus 로고
    • Analysis of anther transcriptomes to identify genes contributing to meiosis and male gametophyte development in rice
    • Deveshwar, P., Bovill, W. D., Sharma, R., Able, J. A., and Kapoor, S. (2011). Analysis of anther transcriptomes to identify genes contributing to meiosis and male gametophyte development in rice. BMC Plant Biol. 11:78. doi:10.1186/1471-2229-11-78
    • (2011) BMC Plant Biol , vol.11 , pp. 78
    • Deveshwar, P.1    Bovill, W.D.2    Sharma, R.3    Able, J.A.4    Kapoor, S.5
  • 16
    • 84860822263 scopus 로고    scopus 로고
    • Meiosis-specific noncoding RNA mediates robust pairing of homologous chromosomes in meiosis
    • Ding, D.-Q., Okamasa, K., Yamane, M., Tsutsumi, C., Haraguchi, T., Yamamoto, M., et al. (2012). Meiosis-specific noncoding RNA mediates robust pairing of homologous chromosomes in meiosis. Science 336, 732-736. doi:10.1126/science.1219518
    • (2012) Science , vol.336 , pp. 732-736
    • Ding, D.-Q.1    Okamasa, K.2    Yamane, M.3    Tsutsumi, C.4    Haraguchi, T.5    Yamamoto, M.6
  • 17
    • 0032848365 scopus 로고    scopus 로고
    • Pollen sporopollenin: Degradation and structural elucidation
    • Domínguez, E., and Mercado, J. (1999). Pollen sporopollenin: degradation and structural elucidation. Sex. Plant 12, 171-178. doi:10.1007/s004970050189
    • (1999) Sex. Plant , vol.12 , pp. 171-178
    • Domínguez, E.1    Mercado, J.2
  • 18
    • 0031019809 scopus 로고    scopus 로고
    • Involvement of purine nucleotide synthetic pathways in gonadotropin-induced meiotic maturation in mouse cumulus cell-enclosed oocytes
    • Downs, S. M. (1997). Involvement of purine nucleotide synthetic pathways in gonadotropin-induced meiotic maturation in mouse cumulus cell-enclosed oocytes. Mol. Reprod. Dev. 46, 155-167. doi:10.1002/(SICI)1098-2795(199702)46:2<155::AID-MRD6>3.0.CO;2-P
    • (1997) Mol. Reprod. Dev , vol.46 , pp. 155-167
    • Downs, S.M.1
  • 19
    • 0031917553 scopus 로고    scopus 로고
    • Meiotic induction in cumulus cell-enclosed mouse oocytes: Involvement of the pentose phosphate pathway
    • Downs, S. M., Humpherson, P. G., and Leese, H. J. (1998). Meiotic induction in cumulus cell-enclosed mouse oocytes: involvement of the pentose phosphate pathway. Biol. Reprod. 58, 1084-1094. doi:10.1095/biolreprod58.4.1084
    • (1998) Biol. Reprod , vol.58 , pp. 1084-1094
    • Downs, S.M.1    Humpherson, P.G.2    Leese, H.J.3
  • 22
    • 48549084408 scopus 로고    scopus 로고
    • RNA silencing in plants: Yesterday, today, and tomorrow
    • Eamens, A., Wang, M.-B., Smith, N. A., and Waterhouse, P. M. (2008). RNA silencing in plants: yesterday, today, and tomorrow. Plant physiol. 147, 456-468. doi:10.1104/pp.108.117275
    • (2008) Plant Physiol , vol.147 , pp. 456-468
    • Eamens, A.1    Wang, M.-B.2    Smith, N.A.3    Waterhouse, P.M.4
  • 23
    • 77957861306 scopus 로고    scopus 로고
    • A Mec1-and PP4-dependent checkpoint couples centromere pairing to meiotic recombination
    • Falk, J. E., Chan, A. C.-H., Hoffmann, E., and Hochwagen, A. (2010). A Mec1-and PP4-dependent checkpoint couples centromere pairing to meiotic recombination. Dev. Cell 19, 599-611. doi:10.1016/j.devcel.2010.09.006
    • (2010) Dev. Cell , vol.19 , pp. 599-611
    • Falk, J.E.1    Chan, A.C.2    Hoffmann, E.3    Hochwagen, A.4
  • 24
    • 79960264362 scopus 로고    scopus 로고
    • Full-length transcriptome assembly from RNA-Seq data without a reference genome
    • Grabherr, M. G., Haas, B. J., Yassour, M., Levin, J. Z., Thompson, D. A., Amit, I., et al. (2011). Full-length transcriptome assembly from RNA-Seq data without a reference genome. Nat. Biotechnol. 29, 644-652. doi:10.1038/nbt.1883
    • (2011) Nat. Biotechnol , vol.29 , pp. 644-652
    • Grabherr, M.G.1    Haas, B.J.2    Yassour, M.3    Levin, J.Z.4    Thompson, D.A.5    Amit, I.6
  • 25
    • 84861082566 scopus 로고    scopus 로고
    • Arginase induction represses gall development during clubroot infection in arabidopsis
    • Gravot, A., Deleu, C., Wagner, G., Lariagon, C., Lugan, R., Todd, C., et al. (2012). Arginase induction represses gall development during clubroot infection in arabidopsis. Plant Cell Physiol. 53, 901-911. doi:10.1093/pcp/pcs037
    • (2012) Plant Cell Physiol , vol.53 , pp. 901-911
    • Gravot, A.1    Deleu, C.2    Wagner, G.3    Lariagon, C.4    Lugan, R.5    Todd, C.6
  • 26
    • 33745915711 scopus 로고    scopus 로고
    • Genetics of meiotic prophase I in plants
    • Hamant, O., Ma, H., and Cande, W. Z. (2006). Genetics of meiotic prophase I in plants. Ann. Rev. Plant Biol. 57, 267-302. doi:10.1146/annurev.arplant.57.032905.105255
    • (2006) Ann. Rev. Plant Biol , vol.57 , pp. 267-302
    • Hamant, O.1    Ma, H.2    Cande, W.Z.3
  • 28
    • 0034705293 scopus 로고    scopus 로고
    • Structural biology of Rad50 ATPase: ATP-driven conformational control in DNA double-strand break repair and the ABC-ATPase superfamily
    • Hopfner, K. P., Karcher, A., Shin, D. S., Craig, L., Arthur, L. M., Carney, J. P., et al. (2000). Structural biology of Rad50 ATPase: ATP-driven conformational control in DNA double-strand break repair and the ABC-ATPase superfamily. Cell 101, 789-800. doi:10.1016/S0092-8674(00)80890-9
    • (2000) Cell , vol.101 , pp. 789-800
    • Hopfner, K.P.1    Karcher, A.2    Shin, D.S.3    Craig, L.4    Arthur, L.M.5    Carney, J.P.6
  • 29
    • 83455213290 scopus 로고    scopus 로고
    • Insights into hypoxic systemic responses based on analyses of transcriptional regulation in Arabidopsis
    • Hsu, F.-C., Chou, M.-Y., Peng, H.-P., Chou, S.-J., and Shih, M.-C. (2011). Insights into hypoxic systemic responses based on analyses of transcriptional regulation in Arabidopsis. PLoS ONE 6:e28888. doi:10.1371/journal.pone.0028888
    • (2011) Plos ONE , vol.6
    • Hsu, F.-C.1    Chou, M.-Y.2    Peng, H.-P.3    Chou, S.-J.4    Shih, M.-C.5
  • 30
    • 84891810676 scopus 로고    scopus 로고
    • PlantTFDB 3.0: A portal for the functional and evolutionary study of plant transcription factors
    • Jin, J., Zhang, H., Kong, L., Gao, G., and Luo, J. (2014). PlantTFDB 3.0: a portal for the functional and evolutionary study of plant transcription factors. Nucl. Acids Res. 42, D1182-D1187. doi:10.1093/nar/gkt1016
    • (2014) Nucl. Acids Res , vol.42 , pp. D1182-D1187
    • Jin, J.1    Zhang, H.2    Kong, L.3    Gao, G.4    Luo, J.5
  • 31
    • 79961230602 scopus 로고    scopus 로고
    • Progress towards a reference genome for sunflower
    • Kane, N., Gill, N., and King, M. (2011). Progress towards a reference genome for sunflower. Botany 437, 429-437. doi:10.1139/b11-032
    • (2011) Botany , vol.437 , pp. 429-437
    • Kane, N.1    Gill, N.2    King, M.3
  • 32
    • 84859210032 scopus 로고    scopus 로고
    • Fast gapped-read alignment with Bowtie 2
    • Langmead, B., and Salzberg, S. L. (2012). Fast gapped-read alignment with Bowtie 2. Nat. Methods 9, 357-359. doi:10.1038/nmeth.1923
    • (2012) Nat. Methods , vol.9 , pp. 357-359
    • Langmead, B.1    Salzberg, S.L.2
  • 33
    • 84863533639 scopus 로고    scopus 로고
    • Characterization of a set of novel meiotically-active promoters in Arabidopsis
    • Li, J., Farmer, A. D., Lindquist, I. E., Dukowic-Schulze, S., Mudge, J., Li, T., et al. (2012). Characterization of a set of novel meiotically-active promoters in Arabidopsis. BMC Plant Biol. 12:104. doi:10.1186/1471-2229-12-104
    • (2012) BMC Plant Biol , vol.12 , pp. 104
    • Li, J.1    Farmer, A.D.2    Lindquist, I.E.3    Dukowic-Schulze, S.4    Mudge, J.5    Li, T.6
  • 34
    • 84878230501 scopus 로고    scopus 로고
    • PHYTOCHROME INTERACTING FACTOR3 associates with the histone deacetylase HDA15 in repression of chlorophyll biosynthesis and photosynthesis in etiolated Arabidopsis seedlings
    • Liu, X., Chen, C.-Y., Wang, K.-C., Luo, M., Tai, R., Yuan, L., et al. (2013). PHYTOCHROME INTERACTING FACTOR3 associates with the histone deacetylase HDA15 in repression of chlorophyll biosynthesis and photosynthesis in etiolated Arabidopsis seedlings. Plant Cell 25, 1258-1273. doi:10.1105/tpc.113.109710
    • (2013) Plant Cell , vol.25 , pp. 1258-1273
    • Liu, X.1    Chen, C.-Y.2    Wang, K.-C.3    Luo, M.4    Tai, R.5    Yuan, L.6
  • 35
    • 50649089207 scopus 로고    scopus 로고
    • Rna-seq: An assessment of technical reproducibility and comparison with gene expression arrays
    • Marioni, J. C., Mason, C. E., Mane, S. M., Stephens, M., and Gilad, Y. (2008). Rna-seq: an assessment of technical reproducibility and comparison with gene expression arrays. Genome Res. 18, 1509-1517. doi:10.1101/gr.079558.108
    • (2008) Genome Res , vol.18 , pp. 1509-1517
    • Marioni, J.C.1    Mason, C.E.2    Mane, S.M.3    Stephens, M.4    Gilad, Y.5
  • 36
    • 80255127234 scopus 로고    scopus 로고
    • Cutadapt removes adapter sequences from high-throughput sequencing reads
    • Martin, M. (2011). Cutadapt removes adapter sequences from high-throughput sequencing reads. EMBnet.J. 17, 10-12. doi:10.14806/ej.17.1.200
    • (2011) Embnet.J. , vol.17 , pp. 10-12
    • Martin, M.1
  • 37
    • 84894625343 scopus 로고    scopus 로고
    • Dynamics of the chili pepper transcriptome during fruit development
    • Martínez-López, L. A., Ochoa-Alejo, N., and Martínez, O. (2014). Dynamics of the chili pepper transcriptome during fruit development. BMC Genomics 15:143. doi:10.1186/1471-2164-15-143
    • (2014) BMC Genomics , vol.15 , pp. 143
    • Martínez-López, L.A.1    Ochoa-Alejo, N.2    Martínez, O.3
  • 38
    • 0036729529 scopus 로고    scopus 로고
    • The transcriptional program of meiosis and sporulation in fission yeast
    • Mata, J., Lyne, R., Burns, G., and Bähler, J. (2002). The transcriptional program of meiosis and sporulation in fission yeast. Nat. Genet. 32, 143-147. doi:10.1038/ng951
    • (2002) Nat. Genet , vol.32 , pp. 143-147
    • Mata, J.1    Lyne, R.2    Burns, G.3    Bähler, J.4
  • 39
    • 84859620561 scopus 로고    scopus 로고
    • Deficiency in DNA methylation increases meiotic crossover rates in euchromatic but not in heterochromatic regions in Arabidopsis
    • Melamed-Bessudo, C., and Levy, A. A. (2012). Deficiency in DNA methylation increases meiotic crossover rates in euchromatic but not in heterochromatic regions in Arabidopsis. Proc. Natl. Acad. Sci. U.S.A. 109, E981-E988. doi:10.1073/pnas.1120742109
    • (2012) Proc. Natl. Acad. Sci. U.S.A. , vol.109 , pp. E981-E988
    • Melamed-Bessudo, C.1    Levy, A.A.2
  • 40
    • 0037743399 scopus 로고    scopus 로고
    • Isolation and characterization of a novel gras gene that regulates meiosis-associated gene expression
    • Morohashi, K., Minami, M., Takase, H., Hotta, Y., and Hiratsuka, K. (2003). Isolation and characterization of a novel gras gene that regulates meiosis-associated gene expression. J. Biol. Chem. 278, 20865-20873. doi:10.1074/jbc.M301712200
    • (2003) J. Biol. Chem , vol.278 , pp. 20865-20873
    • Morohashi, K.1    Minami, M.2    Takase, H.3    Hotta, Y.4    Hiratsuka, K.5
  • 41
    • 78649861218 scopus 로고    scopus 로고
    • Break-induced ATR and Ddb1-Cul4(Cdt) ubiquitin ligase-dependent nucleotide synthesis promotes homologous recombination repair in fission yeast
    • Moss, J., Tinline-Purvis, H., Walker, C. A., Folkes, L. K., Stratford, M. R., Hayles, J., et al. (2010). Break-induced ATR and Ddb1-Cul4(Cdt) ubiquitin ligase-dependent nucleotide synthesis promotes homologous recombination repair in fission yeast. Genes Dev. 24, 2705-2716. doi:10.1101/gad.1970810
    • (2010) Genes Dev , vol.24 , pp. 2705-2716
    • Moss, J.1    Tinline-Purvis, H.2    Walker, C.A.3    Folkes, L.K.4    Stratford, M.R.5    Hayles, J.6
  • 42
    • 0038460047 scopus 로고    scopus 로고
    • AraCyc: A biochemical pathway database for Arabidopsis
    • Mueller, L., Zhang, P., and Rhee, S. (2003). AraCyc: a biochemical pathway database for Arabidopsis. Plant Physiol. 132, 453-460. doi:10.1104/pp.102.017236
    • (2003) Plant Physiol , vol.132 , pp. 453-460
    • Mueller, L.1    Zhang, P.2    Rhee, S.3
  • 43
    • 80052033085 scopus 로고    scopus 로고
    • Global transcriptome analysis of two ameiotic1 alleles in maize anthers: Defining steps in meiotic entry and progression through prophase I
    • Nan, G.-L., Ronceret, A., Wang, R. C., Fernandes, J. F., Cande, W. Z., and Walbot, V. (2011). Global transcriptome analysis of two ameiotic1 alleles in maize anthers: defining steps in meiotic entry and progression through prophase I. BMC Plant Biol. 11:120. doi:10.1186/1471-2229-11-120
    • (2011) BMC Plant Biol , vol.11 , pp. 120
    • Nan, G.-L.1    Ronceret, A.2    Wang, R.C.3    Fernandes, J.F.4    Cande, W.Z.5    Walbot, V.6
  • 44
    • 0034799943 scopus 로고    scopus 로고
    • Strand exchange reaction in vitro and DNA-dependent ATPase activity of recombinant LIM15/DMC1 and RAD51 proteins from Coprinus cinereus
    • Nara, T., Hamada, F., Namekawa, S., and Sakaguchi, K. (2001). Strand exchange reaction in vitro and DNA-dependent ATPase activity of recombinant LIM15/DMC1 and RAD51 proteins from Coprinus cinereus. Biochem. Biophys. Res. Commun. 285, 92-97. doi:10.1006/bbrc.2001.5095
    • (2001) Biochem. Biophys. Res. Commun , vol.285 , pp. 92-97
    • Nara, T.1    Hamada, F.2    Namekawa, S.3    Sakaguchi, K.4
  • 45
    • 79954622489 scopus 로고    scopus 로고
    • Pathways to meiotic recombination in Arabidopsis thaliana
    • Osman, K., Higgins, J. D., Sanchez-Moran, E., Armstrong, S. J., and Franklin, F. C. H. (2011). Pathways to meiotic recombination in Arabidopsis thaliana. New Phytol. 190, 523-544. doi:10.1111/j.1469-8137.2011.03665.x
    • (2011) New Phytol , vol.190 , pp. 523-544
    • Osman, K.1    Higgins, J.D.2    Sanchez-Moran, E.3    Armstrong, S.J.4    Franklin, F.C.H.5
  • 46
    • 0031037911 scopus 로고    scopus 로고
    • Regulation of gene expression during meiosis in Saccharomyces cerevisiae: SPR3 is controlled by both ABFI and a new sporulation control element
    • Ozsarac, N., Straffon, M. J., Dalton, H. E., and Dawes, I. W. (1997). Regulation of gene expression during meiosis in Saccharomyces cerevisiae: SPR3 is controlled by both ABFI and a new sporulation control element. Mol. Cell. Biol. 17, 1152-1159.
    • (1997) Mol. Cell. Biol , vol.17 , pp. 1152-1159
    • Ozsarac, N.1    Straffon, M.J.2    Dalton, H.E.3    Dawes, I.W.4
  • 48
    • 28244431712 scopus 로고    scopus 로고
    • Coordinating the events of the meiotic prophase
    • Pawlowski, W. P., and Cande, W. Z. (2005). Coordinating the events of the meiotic prophase. Trends Cell Biol. 15, 674-681. doi:10.1016/j.tcb.2005.10.005
    • (2005) Trends Cell Biol , vol.15 , pp. 674-681
    • Pawlowski, W.P.1    Cande, W.Z.2
  • 49
    • 62549087063 scopus 로고    scopus 로고
    • Maize AMEIOTIC1 is essential for multiple early meiotic processes and likely required for the initiation of meiosis
    • Pawlowski, W. P., Wang, C.-J. R., Golubovskaya, I. N., Szymaniak, J. M., Shi, L., Hamant, O., et al. (2009). Maize AMEIOTIC1 is essential for multiple early meiotic processes and likely required for the initiation of meiosis. Proc. Natl. Acad. Sci. U.S.A. 106, 3603-3608. doi:10.1073/pnas.0810115106
    • (2009) Proc. Natl. Acad. Sci. U.S.A. , vol.106 , pp. 3603-3608
    • Pawlowski, W.P.1    Wang, C.-J.R.2    Golubovskaya, I.N.3    Szymaniak, J.M.4    Shi, L.5    Hamant, O.6
  • 50
    • 80052788645 scopus 로고    scopus 로고
    • New and old ways to control meiotic recombination
    • Phadnis, N., Hyppa, R. W., and Smith, G. R. (2011). New and old ways to control meiotic recombination. Trends Genet. 27, 411-421. doi:10.1016/j.tig.2011.06.007
    • (2011) Trends Genet , vol.27 , pp. 411-421
    • Phadnis, N.1    Hyppa, R.W.2    Smith, G.R.3
  • 51
    • 33751317226 scopus 로고    scopus 로고
    • A family of zinc-finger proteins is required for chromosome-specific pairing and synapsis during meiosis in C
    • Phillips, C. M., and Dernburg, A. F. (2006). A family of zinc-finger proteins is required for chromosome-specific pairing and synapsis during meiosis in C. elegans. Dev. Cell 11, 817-829. doi:10.1016/j.devcel.2006.09.020
    • (2006) Elegans. Dev. Cell , vol.11 , pp. 817-829
    • Phillips, C.M.1    Dernburg, A.F.2
  • 52
    • 84981689154 scopus 로고
    • Succulence, cations and organic acids in leaves of kalanchoe daigremontiana grown in long and short days in soil and water culture
    • Phillips, R. D., and Jennings, D. H. (1976). Succulence, cations and organic acids in leaves of kalanchoe daigremontiana grown in long and short days in soil and water culture. New Phytol. 77, 599-611. doi:10.1111/j.1469-8137.1976.tb04652.x
    • (1976) New Phytol , vol.77 , pp. 599-611
    • Phillips, R.D.1    Jennings, D.H.2
  • 53
    • 75649134588 scopus 로고    scopus 로고
    • Plaza: A comparative genomics resource to study gene and genome evolution in plants
    • Proost, S., van Bel, M., Sterck, L., Billiau, K., van Parys, T., van de Peer, Y., et al. (2009). Plaza: a comparative genomics resource to study gene and genome evolution in plants. Plant Cell 21, 3718-3731. doi:10.1105/tpc.109.071506
    • (2009) Plant Cell , vol.21 , pp. 3718-3731
    • Proost, S.1    Van Bel, M.2    Sterck, L.3    Billiau, K.4    Van Parys, T.5    Van De Peer, Y.6
  • 54
    • 84877279380 scopus 로고    scopus 로고
    • Characterization of the metabolic requirements in yeast meiosis
    • Ray, D., and Ye, P. (2013). Characterization of the metabolic requirements in yeast meiosis. PLoS ONE 8:e63707. doi:10.1371/journal.pone.0063707
    • (2013) Plos ONE , vol.8
    • Ray, D.1    Ye, P.2
  • 55
    • 84964924930 scopus 로고    scopus 로고
    • Vienna: R Foundation for Statistical Computingonline at
    • R Core Team. (2013). R: A Language and Environment for Statistical Computing. Vienna: R Foundation for Statistical Computing. Available online at: http://www.R-project.org/
    • (2013) R: A Language and Environment for Statistical Computing
  • 56
    • 48049087429 scopus 로고    scopus 로고
    • Arabidopsis SMG7 protein is required for exit from meiosis
    • Riehs, N., Akimcheva, S., Puizina, J., Bulankova, P., Idol, R. A., Siroky, J., et al. (2008). Arabidopsis SMG7 protein is required for exit from meiosis. J. Cell Sci. 121(pt 13), 2208-2216. doi:10.1242/jcs.027862
    • (2008) J. Cell Sci , vol.121 , pp. 2208-2216
    • Riehs, N.1    Akimcheva, S.2    Puizina, J.3    Bulankova, P.4    Idol, R.A.5    Siroky, J.6
  • 57
    • 84966194407 scopus 로고
    • Genomic map of a diploid hybrid species
    • Rieseberg, L. H., Choi, H., Chan, R., and Spore, C. (1993). Genomic map of a diploid hybrid species. Heredity 70, 285-293. doi:10.1038/hdy.1993.41
    • (1993) Heredity , vol.70 , pp. 285-293
    • Rieseberg, L.H.1    Choi, H.2    Chan, R.3    Spore, C.4
  • 58
    • 0029046245 scopus 로고
    • Hybrid speciation accompanied by genomic reorganization in wild sunflowers
    • Rieseberg, L. H., van Fossen, C., and Desrochers, A. M. (1995). Hybrid speciation accompanied by genomic reorganization in wild sunflowers. Nature 375, 313-316. doi:10.1038/375313a0
    • (1995) Nature , vol.375 , pp. 313-316
    • Rieseberg, L.H.1    Van Fossen, C.2    Desrochers, A.M.3
  • 59
    • 84871946825 scopus 로고    scopus 로고
    • Streaming fragment assignment for real-time analysis of sequencing experiments
    • Roberts, A., and Pachter, L. (2013). Streaming fragment assignment for real-time analysis of sequencing experiments. Nat. Methods 10, 71-73. doi:10.1038/nmeth.2251
    • (2013) Nat. Methods , vol.10 , pp. 71-73
    • Roberts, A.1    Pachter, L.2
  • 60
    • 75249087100 scopus 로고    scopus 로고
    • EdgeR: A Bioconductor package for differential expression analysis of digital gene expression data
    • Robinson, M. D., McCarthy, D. J., and Smyth, G. K. (2010). edgeR: a Bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics 26, 139-140. doi:10.1093/bioinformatics/btp616
    • (2010) Bioinformatics , vol.26 , pp. 139-140
    • Robinson, M.D.1    McCarthy, D.J.2    Smyth, G.K.3
  • 61
    • 36448981743 scopus 로고    scopus 로고
    • Moderated statistical tests for assessing differences in tag abundance
    • Robinson, M. D., and Smyth, G. K. (2007). Moderated statistical tests for assessing differences in tag abundance. Bioinformatics 23, 2881-2887. doi:10.1093/bioinformatics/btm453
    • (2007) Bioinformatics , vol.23 , pp. 2881-2887
    • Robinson, M.D.1    Smyth, G.K.2
  • 62
    • 41149085992 scopus 로고    scopus 로고
    • Small-sample estimation of negative binomial dispersion, with applications to sage data
    • Robinson, M. D., and Smyth, G. K. (2008). Small-sample estimation of negative binomial dispersion, with applications to sage data. Biostatistics 9, 321-332. doi:10.1093/biostatistics/kxm030
    • (2008) Biostatistics , vol.9 , pp. 321-332
    • Robinson, M.D.1    Smyth, G.K.2
  • 63
    • 84978987802 scopus 로고    scopus 로고
    • Análisis Meiótico de una cruza entre girasol cultivado (Heliantus annuus L. Variedad Macrocarpus) y girasol solvestre (Heliantus annuus L. Ssp Texanus Heiser)
    • Rodríguez-de-laPaz, J., Gómez-Martínez, M., and Reyes-Valdés, H. (2007). Análisis Meiótico de una cruza entre girasol cultivado (Heliantus annuus L. variedad Macrocarpus) y girasol solvestre (Heliantus annuus L. ssp Texanus Heiser). Acta Bot. Mex. 80, 7-20.
    • (2007) Acta Bot. Mex , vol.80 , pp. 7-20
    • Rodríguez-De-Lapaz, J.1    Gómez-Martínez, M.2    Reyes-Valdés, H.3
  • 65
    • 79952422304 scopus 로고    scopus 로고
    • Quality control and preprocessing of metagenomic datasets
    • Schmieder, R., and Edwards, R. (2011). Quality control and preprocessing of metagenomic datasets. Bioinformatics 27, 863-864. doi:10.1093/bioinformatics/btr026
    • (2011) Bioinformatics , vol.27 , pp. 863-864
    • Schmieder, R.1    Edwards, R.2
  • 66
    • 0000128226 scopus 로고
    • Description of sunflower growth stages
    • Schneiter, A., and Miller, J. (1981). Description of sunflower growth stages. Crop Sci. 21, 901-903. doi:10.2135/cropsci1981.0011183X002100060024x
    • (1981) Crop Sci , vol.21 , pp. 901-903
    • Schneiter, A.1    Miller, J.2
  • 67
    • 84979572720 scopus 로고    scopus 로고
    • Basic information
    • Chapter 1, eds J. Hu, G. Seiler, and C. Kole (Cleveland, OH: CRC Press
    • Seller, G., and Jan, C. (2010). “Basic information,” in Genetics, Genomics and Breeding of Sunflower, Chapter 1, eds J. Hu, G. Seiler, and C. Kole (Cleveland, OH: CRC Press), 1-40. doi:10.1201/b10192-2
    • (2010) Genetics, Genomics and Breeding of Sunflower , pp. 1-40
    • Seller, G.1    Jan, C.2
  • 68
    • 38049155945 scopus 로고    scopus 로고
    • Regulation of dna double-strand break repair pathway choice
    • Shrivastav, M., de Haro, L. P., and Nickoloff, J. A. (2008). Regulation of dna double-strand break repair pathway choice. Cell Res. 18, 134-147. doi:10.1038/cr.2007.111
    • (2008) Cell Res , vol.18 , pp. 134-147
    • Shrivastav, M.1    De Haro, L.P.2    Nickoloff, J.A.3
  • 69
    • 0042424602 scopus 로고    scopus 로고
    • Statistical significance for genomewide studies
    • Storey, J. D., and Tibshirani, R. (2003). Statistical significance for genomewide studies. Proc. Natl. Acad. Sci. U.S.A. 100, 9440-9445. doi:10.1073/pnas.1530509100
    • (2003) Proc. Natl. Acad. Sci. U.S.A. , vol.100 , pp. 9440-9445
    • Storey, J.D.1    Tibshirani, R.2
  • 70
    • 33749037701 scopus 로고    scopus 로고
    • Mechanism of homologous recombination: Mediators and helicases take on regulatory functions
    • Sung, P., and Klein, H. (2006). Mechanism of homologous recombination: mediators and helicases take on regulatory functions. Nat. Rev. Mol. Cell Biol. 7, 739-750. doi:10.1038/nrm2008
    • (2006) Nat. Rev. Mol. Cell Biol , vol.7 , pp. 739-750
    • Sung, P.1    Klein, H.2
  • 71
    • 0034020067 scopus 로고    scopus 로고
    • Transcriptional regulation of meiosis in yeast
    • Vershon, A. K., and Pierce, M. (2000). Transcriptional regulation of meiosis in yeast. Curr. Opin. Cell Biol. 12, 334-339. doi:10.1016/S0955-0674(00)00104-6
    • (2000) Curr. Opin. Cell Biol , vol.12 , pp. 334-339
    • Vershon, A.K.1    Pierce, M.2
  • 72
    • 34748860416 scopus 로고    scopus 로고
    • Differential gene expression in Arabidopsis wild-type and mutant anthers: Insights into anther cell differentiation and regulatory networks
    • Wijeratne, A. J., Zhang, W., Sun, Y., Liu, W., Albert, R., Zheng, Z., et al. (2007). Differential gene expression in Arabidopsis wild-type and mutant anthers: insights into anther cell differentiation and regulatory networks. Plant J. Cell Mol. Biol. 52, 14-29. doi:10.1111/j.1365-313X.2007.03217.x
    • (2007) Plant J. Cell Mol. Biol , vol.52 , pp. 14-29
    • Wijeratne, A.J.1    Zhang, W.2    Sun, Y.3    Liu, W.4    Albert, R.5    Zheng, Z.6
  • 73
    • 56549102814 scopus 로고    scopus 로고
    • Managing meiotic recombination in plant breeding
    • Wijnker, E., and de Jong, H. (2008). Managing meiotic recombination in plant breeding. Trends Plant Sci. 13, 640-646. doi:10.1016/j.tplants.2008.09.004
    • (2008) Trends Plant Sci , vol.13 , pp. 640-646
    • Wijnker, E.1    De Jong, H.2
  • 74
    • 84859421171 scopus 로고    scopus 로고
    • Reverse breeding in Arabidopsis thaliana generates homozygous parental lines from a heterozygous plant
    • Wijnker, E., van Dun, K., de Snoo, C. B., Lelivelt, C. L. C., Keurentjes, J. J. B., Naharudin, N. S., et al. (2012). Reverse breeding in Arabidopsis thaliana generates homozygous parental lines from a heterozygous plant. Nat. Genet. 44, 467-470. doi:10.1038/ng.2203
    • (2012) Nat. Genet , vol.44 , pp. 467-470
    • Wijnker, E.1    Van Dun, K.2    De Snoo, C.B.3    Lelivelt, C.L.C.4    Keurentjes, J.J.B.5    Naharudin, N.S.6
  • 75
    • 77957829514 scopus 로고    scopus 로고
    • Mek1 kinase governs outcomes of meiotic recombination and the checkpoint response
    • Wu, H.-Y., Ho, H.-C., and Burgess, S. M. (2010). Mek1 kinase governs outcomes of meiotic recombination and the checkpoint response. Curr. Biol. 20, 1707-1716. doi:10.1016/j.cub.2010.09.016
    • (2010) Curr. Biol , vol.20 , pp. 1707-1716
    • Wu, H.-Y.1    Ho, H.-C.2    Burgess, S.M.3
  • 76
    • 79551643605 scopus 로고    scopus 로고
    • The transcriptome landscape of Arabidopsis male meiocytes from high-throughput sequencing: The complexity and evolution of the meiotic process
    • Yang, H., Lu, P., Wang, Y., and Ma, H. (2011). The transcriptome landscape of Arabidopsis male meiocytes from high-throughput sequencing: the complexity and evolution of the meiotic process. Plant J. Cell Mol. Biol. 65, 503-516. doi:10.1111/j.1365-313X.2010.04439.x
    • (2011) Plant J. Cell Mol. Biol , vol.65 , pp. 503-516
    • Yang, H.1    Lu, P.2    Wang, Y.3    Ma, H.4
  • 77
    • 0038118701 scopus 로고    scopus 로고
    • The Arabidopsis MALE MEIOCYTE DEATH1 gene encodes a PHD-finger protein that is required for male meiosis
    • Yang, X., Makaroff, C. A., and Ma, H. (2003). The Arabidopsis MALE MEIOCYTE DEATH1 gene encodes a PHD-finger protein that is required for male meiosis. Plant Cell 15, 1281-1295. doi:10.1105/tpc.010447
    • (2003) Plant Cell , vol.15 , pp. 1281-1295
    • Yang, X.1    Makaroff, C.A.2    Ma, H.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.