-
1
-
-
84856750425
-
Human pre-implantation embryo development
-
Niakan, K. K., Han, J., Pedersen, R. A., Simon, C. & Pera, R. A. Human pre-implantation embryo development. Development 139, 829-841, doi: 10.1242/dev.060426 (2012).
-
(2012)
Development
, vol.139
, pp. 829-841
-
-
Niakan, K.K.1
Han, J.2
Pedersen, R.A.3
Simon, C.4
Pera, R.A.5
-
2
-
-
84883743509
-
Single-cell RNA-Seq profiling of human preimplantation embryos and embryonic stem cells
-
Yan, L. et al. Single-cell RNA-Seq profiling of human preimplantation embryos and embryonic stem cells. Nat Struct Mol Biol, doi: 10.1038/nsmb.2660 (2013).
-
(2013)
Nat Struct Mol Biol
-
-
Yan, L.1
-
3
-
-
84941347016
-
Novel PRD-like homeodomain transcription factors and retrotransposon elements in early human development
-
Tohonen, V. et al. Novel PRD-like homeodomain transcription factors and retrotransposon elements in early human development. Nat Commun 6, 8207, doi: 10.1038/ncomms9207 (2015).
-
(2015)
Nat Commun
, vol.6
, pp. 8207
-
-
Tohonen, V.1
-
4
-
-
84944534269
-
Homeodomain proteins: An update
-
Burglin, T. R. & Affolter, M. Homeodomain proteins: an update. Chromosoma, doi: 10.1007/s00412-015-0543-8 (2015).
-
(2015)
Chromosoma
-
-
Burglin, T.R.1
Affolter, M.2
-
5
-
-
84880328173
-
Evolution of homeobox genes
-
Holland, P. W. Evolution of homeobox genes. Wiley Interdiscip Rev Dev Biol 2, 31-45, doi: 10.1002/wdev.78 (2013).
-
(2013)
Wiley Interdiscip Rev Dev Biol
, vol.2
, pp. 31-45
-
-
Holland, P.W.1
-
7
-
-
33845660355
-
Annotation, nomenclature and evolution of four novel homeobox genes expressed in the human germ line
-
Booth, H. A. & Holland, P. W. Annotation, nomenclature and evolution of four novel homeobox genes expressed in the human germ line. Gene 387, 7-14, doi: 10.1016/j.gene.2006.07.034 (2007).
-
(2007)
Gene
, vol.387
, pp. 7-14
-
-
Booth, H.A.1
Holland, P.W.2
-
8
-
-
0035169038
-
Missense mutations of human homeoboxes: A review
-
D'Elia, A. V. et al. Missense mutations of human homeoboxes: A review. Hum Mutat 18, 361-374, doi: 10.1002/humu.1207 (2001).
-
(2001)
Hum Mutat
, vol.18
, pp. 361-374
-
-
D'Elia, A.V.1
-
9
-
-
0027746065
-
Nuclear magnetic resonance spectroscopy of a DNA complex with the uniformly 13C-labeled Antennapedia homeodomain and structure determination of the DNA-bound homeodomain
-
Qian, Y. Q. et al. Nuclear magnetic resonance spectroscopy of a DNA complex with the uniformly 13C-labeled Antennapedia homeodomain and structure determination of the DNA-bound homeodomain. J Mol Biol 234, 1070-1083, doi: 10.1006/jmbi.1993.1660 (1993).
-
(1993)
J Mol Biol
, vol.234
, pp. 1070-1083
-
-
Qian, Y.Q.1
-
10
-
-
38649129104
-
Classification and nomenclature of all human homeobox genes
-
Holland, P. W., Booth, H. A. & Bruford, E. A. Classification and nomenclature of all human homeobox genes. BMC Biol 5, 47, doi: 10.1186/1741-7007-5-47 (2007).
-
(2007)
BMC Biol
, vol.5
, pp. 47
-
-
Holland, P.W.1
Booth, H.A.2
Bruford, E.A.3
-
11
-
-
77953589404
-
The origin and evolution of ARGFX homeobox loci in mammalian radiation
-
Li, G. & Holland, P. W. The origin and evolution of ARGFX homeobox loci in mammalian radiation. BMC Evol Biol 10, 182, doi: 10.1186/1471-2148-10-182 (2010).
-
(2010)
BMC Evol Biol
, vol.10
, pp. 182
-
-
Li, G.1
Holland, P.W.2
-
12
-
-
77749323185
-
RNA-Seq analysis to capture the transcriptome landscape of a single cell
-
Tang, F. et al. RNA-Seq analysis to capture the transcriptome landscape of a single cell. Nat Protoc 5, 516-535, doi: 10.1038/nprot.2009.236 (2010).
-
(2010)
Nat Protoc
, vol.5
, pp. 516-535
-
-
Tang, F.1
-
13
-
-
33744762483
-
CDNA cloning and expression of the human NOBOX gene in oocytes and ovarian follicles
-
Huntriss, J., Hinkins, M. & Picton, H. M. cDNA cloning and expression of the human NOBOX gene in oocytes and ovarian follicles. Mol Hum Reprod 12, 283-289, doi: 10.1093/molehr/gal035 (2006).
-
(2006)
Mol Hum Reprod
, vol.12
, pp. 283-289
-
-
Huntriss, J.1
Hinkins, M.2
Picton, H.M.3
-
14
-
-
79960148060
-
The dynamics of vertebrate homeobox gene evolution: Gain and loss of genes in mouse and human lineages
-
Zhong, Y. F. & Holland, P. W. The dynamics of vertebrate homeobox gene evolution: gain and loss of genes in mouse and human lineages. BMC Evol Biol 11, 169, doi: 10.1186/1471-2148-11-169 (2011).
-
(2011)
BMC Evol Biol
, vol.11
, pp. 169
-
-
Zhong, Y.F.1
Holland, P.W.2
-
15
-
-
84893315703
-
Clonal culturing of human embryonic stem cells on laminin-521/E-cadherin matrix in defined and xeno-free environment
-
Rodin, S. et al. Clonal culturing of human embryonic stem cells on laminin-521/E-cadherin matrix in defined and xeno-free environment. Nat Commun 5, 3195, doi: 10.1038/ncomms4195 (2014).
-
(2014)
Nat Commun
, vol.5
, pp. 3195
-
-
Rodin, S.1
-
16
-
-
84897406127
-
A promoter-level mammalian expression atlas
-
Forrest, A. R. et al. A promoter-level mammalian expression atlas. Nature 507, 462-470, doi: 10.1038/nature13182 (2014).
-
(2014)
Nature
, vol.507
, pp. 462-470
-
-
Forrest, A.R.1
-
17
-
-
84939209563
-
Gateways to the FANTOM5 promoter level mammalian expression atlas
-
Lizio, M. et al. Gateways to the FANTOM5 promoter level mammalian expression atlas. Genome Biol 16, 22, doi: 10.1186/s13059-014-0560-6 (2015).
-
(2015)
Genome Biol
, vol.16
, pp. 22
-
-
Lizio, M.1
-
18
-
-
84905052378
-
DNA methylation dynamics of the human preimplantation embryo
-
Smith, Z. D. et al. DNA methylation dynamics of the human preimplantation embryo. Nature 511, 611-615, doi: 10.1038/nature13581 (2014).
-
(2014)
Nature
, vol.511
, pp. 611-615
-
-
Smith, Z.D.1
-
19
-
-
84864359044
-
Differential DNA methylation in purified human blood cells: Implications for cell lineage and studies on disease susceptibility
-
Reinius, L. E. et al. Differential DNA methylation in purified human blood cells: implications for cell lineage and studies on disease susceptibility. PLoS One 7, e41361, doi: 10.1371/journal.pone.0041361 (2012).
-
(2012)
PLoS One
, vol.7
-
-
Reinius, L.E.1
-
20
-
-
84890060756
-
SAMstrt: Statistical test for differential expression in single-cell transcriptome with spike-in normalization
-
Katayama, S., Tohonen, V., Linnarsson, S. & Kere, J. SAMstrt: statistical test for differential expression in single-cell transcriptome with spike-in normalization. Bioinformatics 29, 2943-2945, doi: 10.1093/bioinformatics/btt511 (2013).
-
(2013)
Bioinformatics
, vol.29
, pp. 2943-2945
-
-
Katayama, S.1
Tohonen, V.2
Linnarsson, S.3
Kere, J.4
-
21
-
-
0034069495
-
Gene ontology: Tool for the unification of biology. The Gene Ontology Consortium
-
Ashburner, M. et al. Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet 25, 25-29, doi: 10.1038/75556 (2000).
-
(2000)
Nat Genet
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
-
22
-
-
84942163495
-
Defining the three cell lineages of the human blastocyst by single-cell RNA-seq
-
Blakeley, P. et al. Defining the three cell lineages of the human blastocyst by single-cell RNA-seq. Development 142, 3151-3165, doi: 10.1242/dev.123547 (2015).
-
(2015)
Development
, vol.142
, pp. 3151-3165
-
-
Blakeley, P.1
-
23
-
-
0031877016
-
Combining evidence using p-values: Application to sequence homology searches
-
Bailey, T. L. & Gribskov, M. Combining evidence using p-values: application to sequence homology searches. Bioinformatics 14, 48-54 (1998).
-
(1998)
Bioinformatics
, vol.14
, pp. 48-54
-
-
Bailey, T.L.1
Gribskov, M.2
-
24
-
-
84890282772
-
Transcription factor evolution in eukaryotes and the assembly of the regulatory toolkit in multicellular lineages
-
de Mendoza, A. et al. Transcription factor evolution in eukaryotes and the assembly of the regulatory toolkit in multicellular lineages. Proceedings of the National Academy of Sciences of the United States of America 110, E4858-4866, doi: 10.1073/pnas.1311818110 (2013).
-
(2013)
Proceedings of the National Academy of Sciences of the United States of America
, vol.110
, pp. E4858-4866
-
-
De Mendoza, A.1
-
25
-
-
0026504525
-
Homeobox genes and axial patterning
-
McGinnis, W. & Krumlauf, R. Homeobox genes and axial patterning. Cell 68, 283-302 (1992).
-
(1992)
Cell
, vol.68
, pp. 283-302
-
-
McGinnis, W.1
Krumlauf, R.2
-
26
-
-
84921828165
-
A Hox regulatory network of hindbrain segmentation is conserved to the base of vertebrates
-
Parker, H. J., Bronner, M. E. & Krumlauf, R. A Hox regulatory network of hindbrain segmentation is conserved to the base of vertebrates. Nature 514, 490-493, doi: 10.1038/nature13723 (2014).
-
(2014)
Nature
, vol.514
, pp. 490-493
-
-
Parker, H.J.1
Bronner, M.E.2
Krumlauf, R.3
-
27
-
-
0036170004
-
Nobox is a homeobox-encoding gene preferentially expressed in primordial and growing oocytes
-
Suzumori, N., Yan, C., Matzuk, M. M. & Rajkovic, A. Nobox is a homeobox-encoding gene preferentially expressed in primordial and growing oocytes. Mech Dev 111, 137-141 (2002).
-
(2002)
Mech Dev
, vol.111
, pp. 137-141
-
-
Suzumori, N.1
Yan, C.2
Matzuk, M.M.3
Rajkovic, A.4
-
28
-
-
84928199128
-
Dynamic Alu methylation during normal development, aging, and tumorigenesis
-
Luo, Y., Lu, X. & Xie, H. Dynamic Alu methylation during normal development, aging, and tumorigenesis. Biomed Res Int 2014, 784706, doi: 10.1155/2014/784706 (2014).
-
(2014)
Biomed Res Int
, vol.2014
, pp. 784706
-
-
Luo, Y.1
Lu, X.2
Xie, H.3
-
29
-
-
84905030212
-
The DNA methylation landscape of human early embryos
-
Guo, H. et al. The DNA methylation landscape of human early embryos. Nature 511, 606-610, doi: 10.1038/nature13544 (2014).
-
(2014)
Nature
, vol.511
, pp. 606-610
-
-
Guo, H.1
-
30
-
-
84919651076
-
Genome-wide analysis of DNA methylation dynamics during early human development
-
Okae, H. et al. Genome-wide analysis of DNA methylation dynamics during early human development. PLoS Genet 10, e1004868, doi: 10.1371/journal.pgen.1004868 (2014).
-
(2014)
PLoS Genet
, vol.10
-
-
Okae, H.1
-
31
-
-
0034614577
-
OTX2 directly interacts with LIM1 and HNF-3beta
-
Nakano, T., Murata, T., Matsuo, I. & Aizawa, S. OTX2 directly interacts with LIM1 and HNF-3beta. Biochem Biophys Res Commun 267, 64-70, doi: 10.1006/bbrc.1999.1872 (2000).
-
(2000)
Biochem Biophys Res Commun
, vol.267
, pp. 64-70
-
-
Nakano, T.1
Murata, T.2
Matsuo, I.3
Aizawa, S.4
-
32
-
-
84872037931
-
Zscan4 promotes genomic stability during reprogramming and dramatically improves the quality of iPS cells as demonstrated by tetraploid complementation
-
Jiang, J. et al. Zscan4 promotes genomic stability during reprogramming and dramatically improves the quality of iPS cells as demonstrated by tetraploid complementation. Cell Res 23, 92-106, doi: 10.1038/cr.2012.157 (2013).
-
(2013)
Cell Res
, vol.23
, pp. 92-106
-
-
Jiang, J.1
-
33
-
-
34548288054
-
NOBOX homeobox mutation causes premature ovarian failure
-
Qin, Y. et al. NOBOX homeobox mutation causes premature ovarian failure. Am J Hum Genet 81, 576-581, doi: 10.1086/519496 (2007).
-
(2007)
Am J Hum Genet
, vol.81
, pp. 576-581
-
-
Qin, Y.1
-
34
-
-
0032553369
-
A rapidly evolving homeobox at the site of a hybrid sterility gene
-
Ting, C. T., Tsaur, S. C., Wu, M. L. & Wu, C. I. A rapidly evolving homeobox at the site of a hybrid sterility gene. Science 282, 1501-1504 (1998).
-
(1998)
Science
, vol.282
, pp. 1501-1504
-
-
Ting, C.T.1
Tsaur, S.C.2
Wu, M.L.3
Wu, C.I.4
-
35
-
-
84946037477
-
Ensembl
-
Cunningham, F. et al. Ensembl. Nucleic Acids Res 43, D662-669, doi: 10.1093/nar/gku1010 (2015).
-
(2015)
Nucleic Acids Res
, vol.43
, pp. D662-669
-
-
Cunningham, F.1
-
36
-
-
0028321893
-
Homeodomain proteins
-
Gehring, W. J., Affolter, M. & Burglin, T. Homeodomain proteins. Annu Rev Biochem 63, 487-526, doi: 10.1146/annurev. bi.63.070194.002415 (1994).
-
(1994)
Annu Rev Biochem
, vol.63
, pp. 487-526
-
-
Gehring, W.J.1
Affolter, M.2
Burglin, T.3
|