Hantavirus pulmonary syndrome and rodent reservoirs in the savanna-like biome of Brazil's southeastern region

Epidemiology and Infection

Volumn 144, Issue 5, 2016, Pages 1107-1116

  Limongi, J E ^a   Oliveira, R C ^b   Guterres, A ^b   Costa Neto, S F ^b   Fernandes, J ^b   Vicente, L H B ^b   Coelho, M G ^a   Ramos, V N ^a   Ferreira, M S ^a   Bonvicino, C R ^b   D'Andrea, P S ^b   Lemos, E R S ^b  

^a FEDERAL UNIVERSITY OF UBERLÂNDIA   (Brazil)

^b INSTITUTO OSWALDO CRUZ   (Brazil)

Author keywords

Araraquara virus; hantavirus pulmonary syndrome; Necromys lasiurus; Rodentia

Indexed keywords

ADOLESCENT; ADULT; ANIMAL TISSUE; ARTICLE; BRAZIL; CALOMYS; CALOMYS EXPULSUS; CALOMYS TENER; CERRADOMYS MARACAJUENSIS; CERRADOMYS MARINUS; CERRADOMYS SCOTTI; CERRADOMYS SUBFLAVUS; CONTROLLED STUDY; ENZYME LINKED IMMUNOSORBENT ASSAY; FEMALE; GENOTYPE; HANTAVIRUS; HANTAVIRUS PULMONARY SYNDROME; HUMAN; INTERSPECIFIC COMPETITION; MALE; MIDDLE AGED; NECROMYS LASIURUS; NONHUMAN; NUCLEOTIDE SEQUENCE; OLIGORYZOMYS MATTOGROSSAE; OLIGORYZOMYS NIGRIPES; OXYMYCTERUS DELATOR; PHYLOGENY; POPULATION DYNAMICS; PSEUDORYZOMYS SIMPLEX; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RODENT; SAVANNA; SPECIES DIVERSITY; VIRUS CARRIER; ANIMAL; DISEASE CARRIER; DNA SEQUENCE; GENETICS; GRASSLAND; METABOLISM; MOLECULAR GENETICS; PHYSIOLOGY; PREVALENCE; RODENT DISEASES; VETERINARY; VIROLOGY; YOUNG ADULT;

VIRUS PROTEIN;

ADULT; ANIMALS; BRAZIL; DISEASE RESERVOIRS; FEMALE; GENOTYPE; GRASSLAND; HANTAVIRUS; HANTAVIRUS PULMONARY SYNDROME; HUMANS; MALE; MIDDLE AGED; MOLECULAR SEQUENCE DATA; PHYLOGENY; POPULATION DYNAMICS; PREVALENCE; RODENT DISEASES; RODENTIA; SEQUENCE ANALYSIS, DNA; SEROEPIDEMIOLOGIC STUDIES; VIRAL PROTEINS; YOUNG ADULT;

EID: 84971592007     PISSN: 09502688     EISSN: 14694409     Source Type: Journal    
DOI: 10.1017/S095026881500237X     Document Type: Article

References (39)

1. Musser GG, Carleton MD. Family Cricetidae. In: Wilson DE, Reeder DM, eds. Mammal Species of the World: a Taxonomic and Geographic Reference, 3rd edn. Baltimore: Johns Hopkins University Press, 2005, pp. 955-1189.
2. Nichol ST, et al. Family Bunyaviridae. In: Fauquet CM, Mayo MA, Maniloff J, et al., eds. Virus Taxonomy: Eighth Report of the International Committee on Taxonomy of Viruses. San Diego: Elsevier Academic Press, 2005, pp. 695-716.
3. Oliveira RC, et al. Hantavirus reservoirs: current status with an emphasis on data from Brazil. Viruses 2014; 6: 1929-1973.
4. Araújo J, et al. Detection of hantavirus in bats from remaining rain forest in São Paulo, Brazil. BMC Research Notes 2012; 215: 690.
5. Limongi JE, et al. Cross-sectional survey of hantavirus infection, Brazil. Emerging Infectious Diseases 2009; 15: 1981-1983.
6. Araujo J, et al. Co-circulation in a single biome of the Juquitiba and Araraquara hantavirus detected in human sera in a sub-tropical region of Brazil. Journal of Medical Virology 2015; 87:725-732.
7. Jonsson CB, Figueiredo LTM, Vapalahti O. A global perspective on hantavirus ecology, epidemiology, and disease. Clinical Microbiology Reviews 2010; 23: 412-441.
8. Oliveira RC, et al. Rio Mamoré virus and hantavirus pulmonary syndrome, Brazil. Emerging Infectious Diseases 2014; 20: 1568-1570.
9. Souza WM, Figueiredo LTM. Analysis of the nucleocapsid gene brings new insights to the classification of Sigmodontinae-borne hantaviruses. Archives of Virology 2014; 159: 2475-2477.
10. Firth C, et al. Diversity and distribution of hantaviruses in South America. Journal of Virology 2012; 86: 13756-13766.
11. Melo-Silva CR, et al. Characterization of hantaviruses circulating in Central Brazil. Infection, Genetics and Evolution 2009; 9: 241-247.
12. Figueiredo LTM, et al. Hantavirus pulmonary syndrome, Central Plateau, Southeastern, and Southern Brazil. Emerging Infectious Diseases 2009; 15: 561-567.
13. Figueiredo LTM, et al. Hantaviruses and cardiopulmonary syndrome in South America. Virus Research 2014; 187: 43-54.
14. Weksler M, Bonvicino CR. Genus Oligoryzomys Bangs, 1900. In: Patton JL, Pardiñas UFJ, D'Elía G, eds. Mammals of South America, vol. 2, Rodents. Chicago: The University of Chicago Press, 2015, pp. 1305-1375.
15. Guterres A, et al. Characterization of Juquitiba virus in Oligoryzomys fornesi from Brazilian Cerrado. Viruses 2014; 6: 1473-1482.
16. Ribeiro JF, Walter BMT. The main phytophysiognomies of Cerrado Biome. In: Sano SM, Almeida SP, Ribeiro JF, eds. Ecologia e Flora. Brasília: Embrapa, 2008, pp. 152-212.
17. Mills JN, et al. Methods for Trapping and Sampling Small Mammals for Virologic Testing. Atlanta: Centers for Disease Control and Prevention, 1995, pp. 201.
18. Pachaly JR, Brito HFV. Interspecific allometric scaling. In: Fowler ME, Cubas ZS, eds. Biology, Medicine, and Surgery of South American Wild Animals. Ames, IA: Iowa State University Press, 2001, pp. 475-481.
19. Mills JN, et al. A longitudinal study of hantavirus infection in three sympatric reservoir species in agroeco-systems on the Argentine Pampa. Vector Borne and Zoonotic Diseases 2007; 7: 229-240.
20. Bonvicino CR, Oliveira JA, D´andrea PS. Guide of the rodents of Brazil with keys for genera, based on external characters. Rio de Janeiro: Centro Panamericano de Febre Aftosa-OPAS/OMS, 2008, pp. 120.
21. Bonvicino CR, et al. The chromosomes of Nectomys (Rodentia, Cricetidae) with 2n = 52, 2n = 56, and interspecific hybrids (2n = 54). Cytogenetics and Cell Genetics 1996; 73: 190-193.
22. Sambrook J, Fritsch EF, Maniatis T. Molecular Cloning: A Laboratory Manual. New York: Cold Spring Harbor Laboratory Press, 1989, pp. 230.
23. Irwin DM, Kocher TD, Wilson AC. Evolution of the cytochrome b gene of mammals. Journal of Molecular Evolution 1991; 32: 128-144.
24. Smith MF, Patton JL. Variation in mitochondrial cytochrome b sequence in natural populations of South American Akodontine rodents (Muridae: Sigmodontinae). Molecular Biology and Evolution 1991; 8: 85-103.
25. Cassens I, et al. Mitochondrial DNA variation in the European otter (Lutralutra) and the use of spatial autocorrelation analysis in conservation. Journal of Heredity 2000; 91: 31-35.
26. Raboni SM, et al. Hantavirus infection in Brazil: development and evaluation of an enzyme immunoassay and immunoblotting based on N recombinant protein. Diagnostic Microbiology and Infectious Disease 2007; 58: 89-97.
27. Figueiredo LTM, et al. Expression of a hantavirus N protein and its efficacy as antigen in immune assays. Brazilian Journal of Medical and Biological Research 2008; 41: 596-599.
28. Figueiredo LTM, et al. Evaluation of an enzyme-linked immunosorbent assay based on Araraquara virus recombinant nucleocapsid protein. American Journal of Tropical Medicine and Hygiene 2009; 81: 273-276
29. Guterres A, et al. Phylogenetic analysis of the S segment from Juquitiba hantavirus: identification of two distinct lineages in Oligoryzomys nigripes. Infection, Genetics and Evolution 2013; 18: 262-268.
30. Tamura K, et al. MEGA5: Molecular Evolutionary Genetics Analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution 2010; 28: 2731-2739.
31. Ronquist F, Huelsenbeck JP. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 2003; 19: 1572-1574.
32. Teixeira BR, et al. Population ecology of hantavirus rodent hosts in southern Brazil. American Journal of Tropical Medicine and Hygiene 2014; 91: 249-257.
33. Limongi JE, et al. Serological survey of hantavirus in rodents in Uberlândia, Minas Gerais, Brazil. Revista do Instituto de Medicina Tropical de São Paulo 2013; 55: 155-158.
34. Streilen KE. Ecology of small mammals in the Semiarid Brazilian Caatinga I. Climate and faunal composition. Annals of Carnegie Museum 1982; 51: 79-107.
35. Marinho-Filho J, et al. Diversity standards and small mammal numbers: conservation of the cerrado biodiversity. Anais da Academia Brasileira de Ciências 1994; 66: 49-156.
36. Limongi JE, et al. Hantavirus cardiopulmonary syndrome in the Triângulo Mineiro and Alto Paranaíba regions, State of Minas Gerais, 1998-2005: clinical-epidemiological aspects of 23 cases. Revista da Sociedade Brasileira de Medicina Tropical 2007; 40: 295-299.
37. Rosa EST, et al. Hantaviruses and hantavirus pulmonary syndrome, Maranhão, Brazil. Emerging Infectious Diseases 2010; 16: 1952-1955.
38. Suzuki A, et al. Identifying rodent hantavirus reservoirs, Brazil. Emerging Infectious Diseases 2004; 10: 2127-2134.
39. Figueiredo GG, et al. Diagnosis of hantavirus infection in humans and rodents in Ribeirão Preto, State of São Paulo, Brazil. Revista da Sociedade Brasileira de Medicina Tropical 2010; 43: 348-354.