Co-circulation in a single biome of the Juquitiba and Araraquara hantavirus detected in human sera in a sub-tropical region of Brazil

Journal of Medical Virology

Volumn 87, Issue 5, 2015, Pages 725-732

  de Araujo, Jansen ^a   Duré, Ana I L ^b   Negrão, Raquel ^a   Ometto, Tatiana ^a   Thomazelli, Luciano M ^a   Durigon, Edison Luiz ^a  

^a UNIVERSITY OF SÃO PAULO   (Brazil)

^b Ezequiel Dias Foundation (FUNED)   (Brazil)

Author keywords

Araraquara virus; Fatal cases; Human hantavirus; Juquitiba virus; SYBR Green real time RT PCR

Indexed keywords

ADULT; AGED; ARTICLE; BRAZIL; CLINICAL ARTICLE; CONTROLLED STUDY; DNA SEQUENCE; FEMALE; GENBANK; GEOGRAPHIC DISTRIBUTION; HANTAVIRUS; HANTAVIRUS INFECTION; HUMAN; MAJOR CLINICAL STUDY; MALE; MICROBIOME; MIDDLE AGED; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION SYSTEM; REAL TIME POLYMERASE CHAIN REACTION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEQUENCE ALIGNMENT; VIRUS DETECTION; VIRUS STRAIN; YOUNG ADULT; ADOLESCENT; BLOOD; CHILD; CLASSIFICATION; CLUSTER ANALYSIS; GENETICS; HANTAVIRUS INFECTIONS; ISOLATION AND PURIFICATION; MOLECULAR GENETICS; PHYLOGENY; SEQUENCE HOMOLOGY; VIROLOGY;

ARARAQUARA VIRUS; HANTAVIRUS;

VIRUS RNA;

ADOLESCENT; ADULT; AGED; BRAZIL; CHILD; CLUSTER ANALYSIS; FEMALE; HANTAVIRUS; HANTAVIRUS INFECTIONS; HUMANS; MALE; MIDDLE AGED; MOLECULAR SEQUENCE DATA; PHYLOGENY; RNA, VIRAL; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY; YOUNG ADULT;

EID: 84925072817     PISSN: 01466615     EISSN: 10969071     Source Type: Journal    
DOI: 10.1002/jmv.24118     Document Type: Article

References (29)

1. Araujo J, Pereira A, Nardi MS, Henriques DA, Lautenschalager D, Dutra LM, Ometto TL, Hurtado RF, Maués F, Nava A, Morais FA, Aires CC, Favorito S, Durigon EL. 2011. Detection of hantaviruses in Brazilian rodents by SYBR-Green-Based Real-Time RT-PCR. Arch Virol 156:1269-1274.
2. Araujo J, Thomazelli LM, Henriques DA, Lautenschalager D, Ometto T, Dutra LM, Aires CC, Favorito S, Durigon EL. 2012. Detection of hantavirus in bats from remaining rain forest in São Paulo, Brazil. BMC Res. Notes 5.
3. Delfraro A, Tomé L, D'Elía G, Clara M, Achával F, Russi JC, Rodonz JRA. 2008. Juquitiba-like hantavirus from 2 nonrelated rodent species, Uruguay. Emerg Infect Dis 14:1447-1451.
4. Easterbrook JD, Klein SL. 2008. Immunological mechanisms mediating hantavirus persistence in rodent reservoirs. PLoS Pathog 4: e1000172.
5. Figueiredo GG De, Borges AA, Campos GM, Machado AM, Saggioro FP, Sabino Júnior GDS, Badra SJ, Ortiz AA, Figueiredo LTM. 2010. Diagnosis of hantavirus infection in humans and rodents in Ribeirão Preto, State of São Paulo, Brazil. Rev Soc Bras Med Trop 43:348-354.
6. Figueiredo LTM, Moreli ML, De-Sousa RLM, Borges AA, De-Figueiredo GG, Machado AM, Bisordi I, Agasse-Sugahara TK, Suzuki A, Pereira LE, De-Souza RP, De-Souza LTM, Braconi CT, Harsi CM, De-Andrade-Zanotto PM. 2009. Hantavirus pulmonary syndrome, Central Plateau, Southeastern, and Southern Brazil. Emerg Infect Dis 15:561-567.
7. Galeno H, Mora J, Villagra E, Fernandez J, Hernandez J, Mertz GJ, Ramirez E. 2002. First human isolate of hantavirus (Andes Virus) in The Americas. Emerg Infect Dis 8:657-661.
8. Guterres A, de Oliveira RC, Fernandes J, Strecht L, Casado F, Gomes de Oliveira, D'Andrea FC, Bonvicino PS, Schrago CR, Sampaio CG, de Lemos ER. 2014. Characterization of Juquitiba virus in Oligoryzomys Fornesi from Brazilian Cerrado. Viruses 6:1473-1482.
9. Hujakka H, Koistinen V, Eerikäinen P, Kuronen I, Laatikainen A, Kauppinen J, Vaheri A, Vapalahti O, Närvänen A. 2001. Comparison of a new immunochromatographic rapid test with a commercial EIA for the detection of Puumala virus specific IgM antibodies. J Clin Virol 23:79-85.
10. Jakab F, Horváth G, Ferenczi E, Sebok J, Varecza Z, Szucs G. 2007. Detection of Dobrava hantaviruses in Apodemus Agrarius mice in the transdanubian region of Hungary. Virus Res 128:149-152.
11. Johnson AM, de Souza LT, Ferreira IB, Pereira LE, Ksiazek TG, Rollin PE, Peters CJ, Nichol ST. 1999. Genetic investigation of novel hantaviruses causing fatal HPS in Brazil. J. Med. Virol. 59:527-535.
12. Kaukinen P, Vaheri A, Plyusnin A. 2005. Hantavirus nucleocapsid protein: A multifunctional molecule with both housekeeping and ambassadorial duties. Arch Virol 150:1693-1713.
13. Limongi JE, da Costa FC, Pinto RMC, de Oliveira RC, Bragagnolo C, Lemos ERS, de Paula MBC, Pajuaba Neto AA, Ferreira MS. 2009. Cross-sectional survey of hantavirus infection, Brazil. Emerg Infect Dis 15:1981-1983.
14. Machado AM, de Souza WM, de Pádua M, da Silva Rodrigues, Machado AR, Figueiredo LTM. 2013. Development of a one-step SYBR Green I Real-Time RT-PCR assay for the detection and quantitation of Araraquara and Rio Mamore hantavirus. Viruses 5:2272-2281.
15. Maes P, Klempa B, Clement J, Matthijnssens J, Gajdusek DC, Krüger DH, Van Ranst M. 2009. A proposal for new criteria for the classification of hantaviruses, based on S and M segment protein sequences. Infect Genet Evol 9:813-820.
16. Mendes WS, Aragão NJ, Santos HJ, Raposo L, Vasconcelos PF, Rosa ES, Elkhoury MR. BMC Res. Notes 2001. Hantavirus pulmonary syndrome in Anajatuba, Maranhão, Brazil. Rev Soc Bras Med Trop 43:237-240.
17. Ministry of Health. 2013. Casos Confirmados de Hantavirose. Brasil, Grandes Regiões e Unidades Federadas. 1993 a 2012*. /portalsaude/arquivos/pdf. (accessed November, 2013).
18. de Oliveira SV, Escobar LE, Peterson a T, Gurgel-Gonçalves R. 2013. Potential geographic distribution of hantavirus reservoirs in Brazil. PloS ONE 8: e85137.
19. Oliveira RC, Teixeira BR, Mello FCA, Pereira AP, Duarte AS, Bonaldo MC, Bonvicino CR, D'Andrea PS, Lemos ERS. 2009. Genetic characterization of a Juquitiba-like viral lineage in Oligoryzomys nigripes in Rio de Janeiro, Brazil. Acta Trop 112:212-218.
20. Ometto T, Durigon EL, Araujo J, Aprelon R, de Aguiar DM, Cavalcante GT, Melo RM, Levi JE, Júnior SMDA, Petry MV, Neto IS, Serafini P, Villalobos E, Cunha EMS, Lara MDCCSH, Nava AFD, Nardi MS, Hurtado R, Rodrigues R, Sherer AL, Sherer JDFM, Geraldi MP, de Seixas MMM, Peterka C, Bandeira DDS, Pradel J, Vachiery N, Labruna MB, de Camargo LMA, Lanciotti R, Lefrançois T. 2013. West Nile virus surveillance, Brazil, 2008-2010. Trans R Soc Trop Med Hyg 107:723-730.
21. Raboni SM, de Borba L, Hoffmann FG, de Noronha L, Azevedo ML, Carstensen S, Mazzarotto GA, Bordignon J, dos Santos CN. 2009. Evidence of circulation of Laguna Negra-like hantavirus in the Central West of Brazil: Case report. J Clin Virol 45:153-156.
22. Raboni SM, Levis S, Rosa EST, Bisordi I, Delfraro A, Lemos E, Correia DC, Duarte Dos Santos CN. 2007. Hantavirus infection in Brazil: Development and evaluation of an enzyme immunoassay and immunoblotting based on N recombinant protein. Diagn Microbiol Infect Dis 58:89-97.
23. Schmaljohn CS, Nichol ST. 2007. Bunyaviridae. In: Knipe DM, Howley PM, editors. Fields virology. Philadelphia, PA: Lippincott Williams & Wilkins, pp 1741-1789.
24. Schmaljohn CS. 1996. Bunyaviridae: The virus and their replication. In: Fields BN, Knipe DM, Howley PM, editors. Fields virology. Philadelphia, PA: Lippincott Raven Publishers, pp 1447-1472.
25. Silva M, Vasconcelos MJ, Hidalgo NTR, Veiga APR, Canzian M, Marotto PCF, Lima VCP. 1997. Hantavirus pulmonary syndrome in the rural area of Juquitiba, São Paulo metropolitan area, Brazil. Rev Soc Bras Med Trop 39:237-238.
26. Silva-Vergara ML, Costa JC, Barata CH, Curi VGM, Tiveron CG, Teixeira AC. 2002. Hantavirus pulmonary syndrome in Uberaba, Minas Gerais, Brazil. Mem Inst Oswaldo Cruz 97:783-787.
27. Sobreira M, Souza GT, Moreli ML, Borges AA, Morais FA, Figueiredo LT, Almeida AM. 2008. A serosurvey for hantavirus infection in wild rodents from the states of Rio de Janeiro and Pernambuco, Brazil. Acta Trop 107:150-152.
28. Suzuki A, Bisordi I, Levis S, Garcia J, Pereira LE, Souza RP, Sugahara TKN, Pini N, Enria D, Souza LTM. 2004. Identifying rodent hantavirus reservoirs. Brazil Emerg Infect Dis 10:2127-2134.
29. Wei F, Li J, Ling J, Chen L-J, Li N, Liu Y-Y, Luo F, Xiong H-R, Hou W, Yang Z-Q. 2013. Establishment of SYBR Green-Based qPCR assay for rapid evaluation and quantification for anti-hantaan virus compounds in vitro and in suckling mice. Virus genes 46:54-62.