-
1
-
-
84925709587
-
Text mining for adverse drug events: The promise
-
Drug Saf
-
Harpaz, R., Callahan, A., Tamang, S. et al. (2014) Text mining for adverse drug events: The promise, challenges, and state of the art. Drug Saf., 37, 777-790.
-
(2014)
Challenges, and State of the Art
, vol.37
, pp. 777-790
-
-
Harpaz, R.1
Callahan, A.2
Tamang, S.3
-
2
-
-
84875459651
-
Computational drug repositioning: From data to therapeutics. Clin
-
Hurle, M.R., Yang, L., Xie, Q. et al. (2013) Computational drug repositioning: from data to therapeutics. Clin. Pharmacol. Ther., 93, 335-341.
-
(2013)
Pharmacol. Ther
, vol.93
, pp. 335-341
-
-
Hurle, M.R.1
Yang, L.2
Xie, Q.3
-
3
-
-
84953343489
-
Exploring relation types for literature-based discovery
-
Preiss, J., Stevenson, M., and Gaizauskas, R. (2015) Exploring relation types for literature-based discovery. J. Am. Med. Inform. Assoc., 22, 987-992.
-
(2015)
J. Am. Med. Inform. Assoc
, vol.22
, pp. 987-992
-
-
Preiss, J.1
Stevenson, M.2
Gaizauskas, R.3
-
4
-
-
79960766975
-
Literature mining, ontologies and information visualization for drug repurposing
-
Andronis, C., Sharma, A., Virvilis, V. et al. (2011) Literature mining, ontologies and information visualization for drug repurposing. Brief. Bioinform., 12, 357-368.
-
(2011)
Brief. Bioinform
, vol.12
, pp. 357-368
-
-
Andronis, C.1
Sharma, A.2
Virvilis, V.3
-
5
-
-
84882760954
-
Using rule-based natural language processing to improve disease normalization in biomedical text
-
Kang, N., Singh, B., Afzal, Z. et al. (2013) Using rule-based natural language processing to improve disease normalization in biomedical text. J. Am. Med. Inform. Assoc., 20, 876-881.
-
(2013)
J. Am. Med. Inform. Assoc
, vol.20
, pp. 876-881
-
-
Kang, N.1
Singh, B.2
Afzal, Z.3
-
6
-
-
84890064920
-
DNorm: Disease name normalization with pairwise learning to rank
-
Leaman, R., Islamaj Dogan, R., and Lu, Z. (2013) DNorm: disease name normalization with pairwise learning to rank. Bioinformatics, 29, 2909-2917.
-
(2013)
Bioinformatics
, vol.29
, pp. 2909-2917
-
-
Leaman, R.1
Islamaj Dogan, R.2
Lu, Z.3
-
7
-
-
8444226720
-
Term identification in the biomedical literature
-
Krauthammer, M. and Nenadic, G. (2004) Term identification in the biomedical literature. J. Biomed. Inf., 37, 512-526.
-
(2004)
J. Biomed. Inf
, vol.37
, pp. 512-526
-
-
Krauthammer, M.1
Nenadic, G.2
-
8
-
-
84872217237
-
The extraction of pharmacogenetic and pharmacogenomic relations-A case study using PharmGKB
-
Buyko, E., Beisswanger, E., and Hahn, U. (2012) The extraction of pharmacogenetic and pharmacogenomic relations-a case study using PharmGKB. Pac. Symp. Biocomput., 376-387.
-
(2012)
Pac. Symp. Biocomput
, pp. 376-387
-
-
Buyko, E.1
Beisswanger, E.2
Hahn, U.3
-
9
-
-
84942412129
-
Extraction of potential adverse drug events from medical case reports
-
Gurulingappa, H., Mateen-Rajput, A., and Toldo, L. (2012) Extraction of potential adverse drug events from medical case reports. J. Biomed. Semantics, 3, 15.
-
(2012)
J. Biomed. Semantics
, vol.3
, pp. 15
-
-
Gurulingappa, H.1
Mateen-Rajput, A.2
Toldo, L.3
-
10
-
-
84897915860
-
Knowledge-based extraction of adverse drug events from biomedical text
-
Kang, N., Singh, B., Bui, C. et al. (2014) Knowledge-based extraction of adverse drug events from biomedical text. BMC Bioinformatics, 15, 64.
-
(2014)
BMC Bioinformatics
, vol.15
, pp. 64
-
-
Kang, N.1
Singh, B.2
Bui, C.3
-
11
-
-
84865989881
-
Development of a benchmark corpus to support the automatic extraction of drug-related adverse effects from medical case reports
-
Gurulingappa, H., Rajput, A.M., Roberts, A. et al. (2012) Development of a benchmark corpus to support the automatic extraction of drug-related adverse effects from medical case reports. J. Biomed. Inf., 45, 885-892.
-
(2012)
J. Biomed. Inf
, vol.45
, pp. 885-892
-
-
Gurulingappa, H.1
Rajput, A.M.2
Roberts, A.3
-
12
-
-
84865957320
-
The EU-ADR corpus: Annotated drugs, diseases, targets, and their relationships
-
van Mulligen, E.M., Fourrier-Reglat, A., Gurwitz, D. et al. (2012) The EU-ADR corpus: Annotated drugs, diseases, targets, and their relationships. J. Biomed. Inf., 45, 879-884.
-
(2012)
J. Biomed. Inf
, vol.45
, pp. 879-884
-
-
Van Mulligen, E.M.1
Fourrier-Reglat, A.2
Gurwitz, D.3
-
15
-
-
84925619870
-
TmChem: A high performance approach for chemical named entity recognition and normalization
-
Leaman, R., Wei, C.H., and Lu, Z. (2015) tmChem: A high performance approach for chemical named entity recognition and normalization. J. Cheminform., 7, S3.
-
(2015)
J. Cheminform
, vol.7
, pp. S3
-
-
Leaman, R.1
Wei, C.H.2
Lu, Z.3
-
16
-
-
84892698876
-
A CTDPfizer collaboration: Manual curation of 88, 000 scientific articles text mined for drug-disease and drug-phenotype interactions
-
bat080
-
Davis, A.P., Wiegers, T.C., Roberts, P.M. et al. (2013) A CTDPfizer collaboration: manual curation of 88, 000 scientific articles text mined for drug-disease and drug-phenotype interactions. Database, 2013, bat080.
-
(2013)
Database
-
-
Davis, A.P.1
Wiegers, T.C.2
Roberts, P.M.3
-
17
-
-
84925683427
-
CHEMDNER: The drugs and chemical names extraction challenge
-
Krallinger, M., Leitner, F., Rabal, O. et al. (2015) CHEMDNER: The drugs and chemical names extraction challenge. J. Cheminform., 7, S1.
-
(2015)
J. Cheminform
, vol.7
, pp. S1
-
-
Krallinger, M.1
Leitner, F.2
Rabal, O.3
-
18
-
-
0032234331
-
Evaluating lexical variant generation to improve information retrieval
-
Divita, G., Browne, A.C., and Rindflesch, T.C. (1998) Evaluating lexical variant generation to improve information retrieval. Proceedings of the American Medical Informatics Association Symposium, pp. 775-779.
-
(1998)
Proceedings of the American Medical Informatics Association Symposium
, pp. 775-779
-
-
Divita, G.1
Browne, A.C.2
Rindflesch, T.C.3
-
19
-
-
0345863927
-
The Unified Medical Language System (UMLS): Integrating biomedical terminology
-
Bodenreider, O. (2004) The Unified Medical Language System (UMLS): Integrating biomedical terminology. Nucleic Acids Res., 32, D267-D270.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. D267-D270
-
-
Bodenreider, O.1
-
20
-
-
84888064144
-
Aggregating UMLS semantic types for reducing conceptual complexity
-
McCray, A.T., Burgun, A., and Bodenreider, O. (2001) Aggregating UMLS semantic types for reducing conceptual complexity. Medinfo, 10, 216-220.
-
(2001)
Medinfo
, vol.10
, pp. 216-220
-
-
McCray, A.T.1
Burgun, A.2
Bodenreider, O.3
-
21
-
-
0041627757
-
A simple algorithm for identifying abbreviation definitions in biomedical text
-
Schwartz, A.S. and Hearst, M.A. (2003) A simple algorithm for identifying abbreviation definitions in biomedical text. Pac. Symp. Biocomput., 4, 451-462.
-
(2003)
Pac. Symp. Biocomput
, vol.4
, pp. 451-462
-
-
Schwartz, A.S.1
Hearst, M.A.2
-
22
-
-
38449109471
-
Combining lexical and semantic methods of inter-terminology mapping using the UMLS
-
Fung, K.W., Bodenreider, O., Aronson, A. et al. (2007) Combining lexical and semantic methods of inter-terminology mapping using the UMLS. Stud. Health Technol. Inform., 129, 605-609.
-
(2007)
Stud. Health Technol. Inform
, vol.129
, pp. 605-609
-
-
Fung, K.W.1
Bodenreider, O.2
Aronson, A.3
-
23
-
-
84870453566
-
SemMedDB: A PubMed-scale repository of biomedical semantic predications
-
Kilicoglu, H., Shin, D., Fiszman, M. et al. (2012) SemMedDB: A PubMed-scale repository of biomedical semantic predications. Bioinformatics, 28, 3158-3160.
-
(2012)
Bioinformatics
, vol.28
, pp. 3158-3160
-
-
Kilicoglu, H.1
Shin, D.2
Fiszman, M.3
-
24
-
-
84970980448
-
RELigator: Chemical- disease relation extraction using prior knowledge and textual information
-
Pons, E., Becker, B., Akhondi, S. et al. (2015) RELigator: chemical- disease relation extraction using prior knowledge and textual information. Proceedings of the Fifth BioCreative Challenge EvaluationWorkshop, pp. 247-253.
-
(2015)
Proceedings of the Fifth BioCreative Challenge EvaluationWorkshop
, pp. 247-253
-
-
Pons, E.1
Becker, B.2
Akhondi, S.3
-
25
-
-
70449720821
-
Text mining and manual curation of chemical-gene-disease networks for the comparative toxicogenomics database (CTD)
-
Wiegers, T.C., Davis, A.P., Cohen, K.B. et al. (2009) Text mining and manual curation of chemical-gene-disease networks for the comparative toxicogenomics database (CTD). BMC Bioinformatics., 10, 326.
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 326
-
-
Wiegers, T.C.1
Davis, A.P.2
Cohen, K.B.3
|