Feedback responses of soil greenhouse gas emissions to climate change are modulated by soil characteristics in dryland ecosystems

Soil Biology and Biochemistry

Volumn 100, Issue , 2016, Pages 21-32

  Martins, Catarina S C ^a   Macdonald, Catriona A ^a   Anderson, Ian C ^a   Singh, Brajesh K ^a,b  

^a WESTERN SYDNEY UNIVERSITY   (Australia)

^b UNIVERSITY OF WESTERN SYDNEY   (Australia)

Author keywords

Bacteria; Elevated CO2; Elevated temperature; GHG emissions; Methanotrophs; N2O reducing bacteria

Indexed keywords

BACTERIA; CARBON; CARBON DIOXIDE; ECOLOGY; ECOSYSTEMS; GAS EMISSIONS; GLOBAL WARMING; GREENHOUSE GASES; NITROGEN OXIDES; PLANNING; SOIL SURVEYS; SOILS;

ADAPTATION STRATEGIES; ELEVATED CO; ELEVATED TEMPERATURE; FUTURE CLIMATE PROJECTIONS; GHG EMISSION; GLOBAL WARMING POTENTIAL; METHANOTROPHS; NITROUS OXIDE EMISSIONS;

CLIMATE CHANGE;

ARID REGION; CARBON DIOXIDE; CLIMATE CHANGE; GLOBAL WARMING; GREENHOUSE GAS; HIGH TEMPERATURE; METHANE; METHANOGENIC BACTERIUM; NITRIFYING BACTERIUM; NITROUS OXIDE; SOIL EMISSION; SOIL MICROORGANISM; SOIL PROPERTY; SOIL TEMPERATURE;

EID: 84969983967     PISSN: 00380717     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.soilbio.2016.05.007     Document Type: Article

References (72)

1. 2 stimulates grassland soil respiration by increasing carbon inputs rather than by enhancing soil moisture. Glob. Change Biol. 2011, 17:3546-3563.
2. Baggs E.M. Soil microbial sources of nitrous oxide: recent advances in knowledge, emerging challenges and future direction. Curr. Opin. Environ. Sustain. 2011, 3:321-327.
3. Bai E., Li S., Xu W., Li W., Dai W., Jiang P. A meta-analysis of experimental warming effects on terrestrial nitrogen pools and dynamics. New Phytol. 2013, 199:441-451.
4. Baldock J.A., Wheeler I., McKenzie N., McBrateny A. Soils and climate change: potential impacts on carbon stocks and greenhouse gas emissions, and future research for Australian agriculture. Crop Pasture Sci. 2012, 63:269-283.
5. Barton L., Gleeson D.B., Maccarone L.D., Zúñiga L.P., Murphy D.V. Is liming soil a strategy for mitigating nitrous oxide emissions from semi-arid soils?. Soil Biol. Biochem. 2013, 62:28-35.
6. 2O emissions from soils at different water-filled pore space. Biol. Fertil. Soils 2005, 41:379-388.
7. 4 uptake to interactive changes in precipitation and temperature along a climatic gradient. Ecosystems 2010, 13:1157-1170.
8. Bond-Lamberty B., Thomson A. Temperature-associated increases in the global soil respiration record. Nature 2010, 464:579-582.
9. Bourne D.G., McDonald I.R., Murrell J.C. Comparison of pmoA PCR primer sets as tools for investigating methanotroph diversity in three danish soils. Appl. Environ. Microbiol. 2001, 67:3802-3809.
10. Bray R.H., Kurtz L.T. Determination of total, organic, and available forms of phosphorus in soils. Soil Sci. 1945, 59:39-46.
11. 2O fluxes. Biogeochemistry 2012, 109:85-100.
12. Burnham K.P., Anderson D.R. Model Selection and Multimodel Inference. A Practical Information-theoretical Approach 2002, Springer-Verlag, New York.
13. Bustin S.A., Benes V., Garson J.A., Hellemans J., Huggett J., Kubista M., Mueller R., Nolan T., Pfaffl M.W., Shipley G.L., Vandesompele J., Wittwer C.T. The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments. Clin. Chem. 2009, 55:611-622.
14. Butterbach-Bahl K., Baggs E.M., Dannenmann M., Kiese R., Zechmeister-Boltenstern S. Nitrous oxide emissions from soils: how well do we understand the processes and their controls?. Philos. Trans. R. Soc. B Biol. Sci. 2013, 368.
15. 2O emissions due to agricultural activities in a changing climate. Curr. Opin. Environ. Sustain. 2011, 3:389-395.
16. 2O fluxes in an upland grassland ecosystem. Glob. Change Biol. 2012, 18:2520-2531.
17. Conrad R. Quantification of methanogenic pathways using stable carbon isotopic signatures: a review and a proposal. Org. Geochem. 2005, 36:739-752.
18. Cox P.M., Betts R.A., Jones C.D., Spall S.A., Totterdell I.J. Acceleration of global warming due to carbon-cycle feedbacks in a coupled climate model. Nature 2000, 408:184-187.
19. Crous K.Y., Ósvaldsson A., Ellsworth D.S. Is phosphorus limiting in a mature Eucalyptus woodland? Phosphorus fertilisation stimulates stem growth. Plant Soil 2015, 391:293-305.
20. Dalal R.C., Allen D.E. Greenhouse gas fluxes from natural ecosystems. Aust. J. Bot. 2008, 56:369-407.
21. Dalal R.C., Wang W., Robertson G.P., Parton W.J. Nitrous oxide emission from Australian agricultural lands and mitigation options: a review. Soil Res. 2003, 41:165-195.
22. 2O emission ratio of a Rendzic Leptosol as influenced by pH and forest thinning. Soil Biol. Biochem. 2008, 40:2317-2323.
23. Delgado-Baquerizo M., Maestre F.T., Gallardo A., Bowker M.A., Wallenstein M.D., Quero J.L., Ochoa V., Gozalo B., Garcia-Gomez M., Soliveres S., Garcia-Palacios P., Berdugo M., Valencia E., Escolar C., Arredondo T., Barraza-Zepeda C., Bran D., Carreira J.A., Chaieb M., Conceicao A.A., Derak M., Eldridge D.J., Escudero A., Espinosa C.I., Gaitan J., Gatica M.G., Gomez-Gonzalez S., Guzman E., Gutierrez J.R., Florentino A., Hepper E., Hernandez R.M., Huber-Sannwald E., Jankju M., Liu J., Mau R.L., Miriti M., Monerris J., Naseri K., Noumi Z., Polo V., Prina A., Pucheta E., Ramirez E., Ramirez-Collantes D.A., Romao R., Tighe M., Torres D., Torres-Diaz C., Ungar E.D., Val J., Wamiti W., Wang D., Zaady E. Decoupling of soil nutrient cycles as a function of aridity in global drylands. Nature 2013, 502:672-676.
24. 2 and temperature. Glob. Change Biol. 2012, 18:2681-2693.
25. 2O in a semiarid grassland. Glob. Change Biol. 2013, 19:1816-1826.
26. Dijkstra F.A., Prior S.A., Runion G.B., Torbert H.A., Tian H., Lu C., Venterea R.T. Effects of elevated carbon dioxide and increased temperature on methane and nitrous oxide fluxes: evidence from field experiments. Front. Ecol. Environ. 2012, 10:520-527.
27. Feng S., Fu Q. Expansion of global drylands under a warming climate. Atmos. Chem. Phys. 2013, 13:14637-14665.
28. Fierer N., Jackson J.A., Vilgalys R., Jackson R.B. Assessment of soil microbial community structure by use of taxon-specific quantitative PCR assays. Appl. Environ. Microbiol. 2005, 71:4117-4120.
29. Fierer N., Lauber C.L., Ramirez K.S., Zaneveld J., Bradford M.A., Knight R. Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients. ISME J. 2012, 6:1007-1017.
30. 4MIP model intercomparison. J. Clim. 2006, 19:3337-3353.
31. Friedlingstein P., Meinshausen M., Arora V.K., Jones C.D., Anav A., Liddicoat S.K., Knutti R. Uncertainties in CMIP5 climate projections due to carbon cycle feedbacks. J. Clim. 2014, 27:511-526.
32. Hagerty S.B., van Groenigen K.J., Allison S.D., Hungate B.A., Schwartz E., Koch G.W., Kolka R.K., Dijkstra P. Accelerated microbial turnover but constant growth efficiency with warming in soil. Nat. Clim. Change 2014, 4:903-906.
33. Hanson P.J., Edwards N.T., Garten C.T., Andrews J.A. Separating root and soil microbial contributions to soil respiration: a review of methods and observations. Biogeochemistry 2000, 48:115-146.
34. Harris J. Soil microbial communities and restoration ecology: facilitators or followers?. Science 2009, 325:573-574.
35. Hart S.C. Potential impacts of climate change on nitrogen transformations and greenhouse gas fluxes in forests: a soil transfer study. Glob. Change Biol. 2006, 12:1032-1046.
36. Henry S., Bru D., Stres B., Hallet S., Philippot L. Quantitative detection of the nosZ gene, encoding nitrous oxide reductase, and comparison of the abundances of 16S rRNA, narG, nirK, and nosZ genes in soils. Appl. Environ. Microbiol. 2006, 72:5181-5189.
37. Horz H.P., Rich V., Avrahami S., Bohannan B.J.M. Methane-oxidizing bacteria in a California upland grassland soil: diversity and response to simulated global change. Appl. Environ. Microbiol. 2005, 71:2642-2652.
38. 2 on autotrophic nitrification and nitrifiers in dryland ecosystems. Soil Biol. Biochem. 2016, 92:1-15.
39. IPCC Climate Change 2013: the Physical Science Basis. Contribution of Working Group I to the Fifth Assessment Report of the Intergovernmental Panel on Climate Change 2013, Cambridge University Press, Cambridge, United Kingdom and New York, NY, USA, 1535 pp.
40. 2O sink capacity. Nat. Clim. Change 2014, 4:801-805.
41. Karhu K., Auffret M.D., Dungait J.A.J., Hopkins D.W., Prosser J.I., Singh B.K., Subke J.-A., Wookey P.A., Agren G.I., Sebastia M.-T., Gouriveau F., Bergkvist G., Meir P., Nottingham A.T., Salinas N., Hartley I.P. Temperature sensitivity of soil respiration rates enhanced by microbial community response. Nature 2014, 513:81-84.
42. Koorem K., Gazol A., Öpik M., Moora M., Saks Ü., Uibopuu A., Sõber V., Zobel M. Soil nutrient content influences the abundance of soil microbes but not plant biomass at the small-scale. PLoS One 2014, 9:e91998.
43. 2, warming, and drought in a Danish heathland: synthesizing results of the CLIMAITE project after two years of treatments. Glob. Change Biol. 2011, 17:1884-1899.
44. Le Mer J., Roger P. Production, oxidation, emission and consumption of methane by soils: a review. Eur. J. Soil Biol. 2001, 37:25-50.
45. Leuzinger S., Luo Y., Beier C., Dieleman W., Vicca S., Körner C. Do global change experiments overestimate impacts on terrestrial ecosystems?. Trends Ecol. Evol. 2011, 26:236-241.
46. 2 efflux in Douglas-fir terracosms. Glob. Change Biol. 1999, 5:157-168.
47. Luo Y. Terrestrial carbon-cycle feedback to climate warming. Annu. Rev. Ecol. Evol. Syst. 2007, 38:683-712.
48. Luo Y., Su B.O., Currie W.S., Dukes J.S., Finzi A., Hartwig U., Hungate B., Mc Murtrie R.E., Oren R.A.M., Parton W.J., Pataki D.E., Shaw M.R., Zak D.R., Field C.B. Progressive nitrogen limitation of ecosystem responses to rising atmospheric carbon dioxide. BioScience 2004, 54:731-739.
49. Maestre F.T., Delgado-Baquerizo M., Jeffries T.C., Eldridge D.J., Ochoa V., Gozalo B., Quero J.L., García-Gómez M., Gallardo A., Ulrich W., Bowker M.A., Arredondo T., Barraza-Zepeda C., Bran D., Florentino A., Gaitán J., Gutiérrez J.R., Huber-Sannwald E., Jankju M., Mau R.L., Miriti M., Naseri K., Ospina A., Stavi I., Wang D., Woods N.N., Yuan X., Zaady E., Singh B.K. Increasing aridity reduces soil microbial diversity and abundance in global drylands. Proc. Natl. Acad. Sci. 2015, 112:15684-15689.
50. Martins C.S.C., Nazaries L., Macdonald C.A., Anderson I.C., Singh B.K. Water availability and abundance of microbial groups are key determinants of greenhouse gas fluxes in a dryland forest ecosystem. Soil Biol. Biochem. 2015, 86:5-16.
51. Millennium Ecosystem Assessment Dryland Systems, Ecosystems and Human Well-being: Current State and Trends 2005, 625-655. Island Press, Washington, DC, USA.
52. Mohanty S.R., Bodelier P.L.E., Conrad R. Effect of temperature on composition of the methanotrophic community in rice field and forest soil. FEMS Microbiol. Ecol. 2007, 62:24-31.
53. 4 grasses prosper as carbon dioxide eliminates desiccation in warmed semi-arid grassland. Nature 2011, 476:202-205.
54. 2 concentrations. FEMS Microbiol. Ecol. 2008, 65:102-112.
55. 2 efflux. Glob. Change Biol. 2014, 20:1146-1160.
56. Orians G.H., Milewski A.V. Ecology of Australia: the effects of nutrient-poor soils and intense fires. Biol. Rev. 2007, 82:393-423.
57. Pennanen T., Liski J., Bååth E., Kitunen V., Uotila J., Westman C.J., Fritze H. Structure of the microbial communities in coniferous forest soils in relation to site fertility and stand development stage. Microb. Ecol. 1999, 38:168-179.
58. Piao S., Ciais P., Friedlingstein P., de Noblet-Ducoudré N., Cadule P., Viovy N., Wang T. Spatiotemporal patterns of terrestrial carbon cycle during the 20th century. Glob. Biogeochem. Cycles 2009, 23:GB4026.
59. Powell J.R., Welsh A., Hallin S. Microbial functional diversity enhances predictive models linking environmental parameters to ecosystem properties. Ecology 2015, 96:1985-1993.
60. Rangel T.F., Diniz-Filho J.A.F., Bini L.M. SAM: a comprehensive application for spatial analysis in macroecology. Ecography 2010, 33:46-50.
61. Rastogi M., Singh S., Pathak H. Emission of carbon dioxide from soil. Curr. Sci. 2002, 82:510-517.
62. 2?. Glob. Change Biol. 2011, 17:3176-3186.
63. Reynolds J.F., Smith D.M.S., Lambin E.F., Turner B.L., Mortimore M., Batterbury S.P.J., Downing T.E., Dowlatabadi H., Fernández R.J., Herrick J.E., Huber-Sannwald E., Jiang H., Leemans R., Lynam T., Maestre F.T., Ayarza M., Walker B. Global desertification: building a science for dryland development. Science 2007, 316:847-851.
64. 2O from the nitrogen cycle - could enzymic regulation hold the key?. Trends Biotechnol. 2009, 27:388-397.
65. Rousk J., Baath E., Brookes P.C., Lauber C.L., Lozupone C., Caporaso J.G., Knight R., Fierer N. Soil bacterial and fungal communities across a pH gradient in an arable soil. ISME J. 2010, 4:1340-1351.
66. Ryan M.G., Law B.E. Interpreting, measuring, and modeling soil respiration. Biogeochemistry 2005, 73:3-27.
67. Shao P., Zeng X., Moore D.J., Zeng X. Soil microbial respiration from observations and earth system models. Environ. Res. Lett. 2013, 8:034034.
68. Singh B.K., Bardgett R.D., Smith P., Reay D.S. Microorganisms and climate change: terrestrial feedbacks and mitigation options. Nat. Rev. Microbiol. 2010, 8:779-790.
69. Tate K.R. Soil methane oxidation and land-use change - from process to mitigation. Soil Biol. Biochem. 2015, 80:260-272.
70. 2. Nature 2011, 475. 214-U121.
71. Wilson B.R., Growns I., Lemon J. Scattered native trees and soil patterns in grazing land on the Northern Tablelands of New South Wales, Australia. Soil Res. 2007, 45:199-205.
72. 4 uptake in an old-growth tropical forest, southern China. Biogeosciences 2011, 8:2805-2813.