Expression regulation of polycistronic lee3 genes of enterohaemorrhagic Escherichia coli

PLoS ONE

Volumn 11, Issue 5, 2016, Pages

  Sun, Wei Sheng W ^a,b   Chen, Jenn Wei ^c   Wu, Yi Chih ^a   Tsai, Hsing Yuan ^a   Kuo, Yu Liang ^d,e   Syu, Wan Jr ^a,b  

^a NATIONAL YANG MING UNIVERSITY   (Taiwan)

^b ACADEMIA SINICA   (Taiwan)

^c NATIONAL CHENG KUNG UNIVERSITY   (Taiwan)

^d CHUNG SHAN MEDICAL UNIVERSITY   (Taiwan)

^e CHUNG SHAN MEDICAL UNIVERSITY HOSPITAL   (Taiwan)

Author keywords

[No Author keywords available]

Indexed keywords

DNA FLANKING REGION; DNA TRANSCRIPTION; ENTEROHEMORRHAGIC ESCHERICHIA COLI; ESCHERICHIA COLI O157; GENE EXPRESSION; OPEN READING FRAME; OPERON; POLYMERASE CHAIN REACTION; TRANSCRIPTION INITIATION; TRANSCRIPTION REGULATION; GENE EXPRESSION REGULATION; GENE ORDER; GENETIC TRANSCRIPTION; GENETICS; GENOMIC ISLAND; METABOLISM; PLASMID; PROTEIN SYNTHESIS; REGULATORY SEQUENCE;

ESCHERICHIA COLI PROTEIN;

ENTEROHEMORRHAGIC ESCHERICHIA COLI; ESCHERICHIA COLI O157; ESCHERICHIA COLI PROTEINS; GENE EXPRESSION REGULATION, BACTERIAL; GENE ORDER; GENOMIC ISLANDS; OPEN READING FRAMES; OPERON; PLASMIDS; PROTEIN BIOSYNTHESIS; REGULATORY SEQUENCES, NUCLEIC ACID; TRANSCRIPTION, GENETIC;

EID: 84969651367     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0155578     Document Type: Article

References (38)

1. Kaper JB. Pathogenic Escherichia coli. International journal of medical microbiology: IJMM. 2005; 295 (6-7):355-6. doi: 10.1016/j.ijmm.2005.06.008 PMID: 16238012.
2. Braeye T, Denayer S, De Rauw K, Forier A, Verluyten J, Fourie L, et al. Lessons learned from a textbook outbreak: EHEC-O157:H7 infections associated with the consumption of raw meat products, June 2012, Limburg, Belgium. Archives of public health. 2014; 72(1):44. doi: 10.1186/2049-3258-72-44 PMID: 25810911; PubMed Central PMCID: PMC4373035.
3. Buchholz U, Bernard H, Werber D, Bohmer MM, Remschmidt C, Wilking H, et al. German outbreak of Escherichia coli O104:H4 associated with sprouts. The New England journal of medicine. 2011; 365 (19):1763-70. doi: 10.1056/NEJMoa1106482 PMID: 22029753.
4. Reid SD, Herbelin CJ, Bumbaugh AC, Selander RK, Whittam TS. Parallel evolution of virulence in pathogenic Escherichia coli. Nature. 2000; 406(6791):64-7. doi: 10.1038/35017546 PMID: 10894541.
5. Cornelis GR. The type III secretion injectisome. Nature reviews Microbiology. 2006; 4(11):811-25. doi: 10.1038/nrmicro1526 PMID: 17041629.
6. Sekiya K, Ohishi M, Ogino T, Tamano K, Sasakawa C, Abe A. Supermolecular structure of the enteropathogenic Escherichia coli type III secretion system and its direct interaction with the EspA-sheath-like structure. Proceedings of the National Academy of Sciences of the United States of America. 2001; 98 (20):11638-43. doi: 10.1073/pnas.191378598 PMID: 11562461; PubMed Central PMCID: PMC58782.
7. Garmendia J, Frankel G, Crepin VF. Enteropathogenic and enterohemorrhagic Escherichia coli infections: translocation, translocation, translocation. Infection and immunity. 2005; 73(5):2573-85. doi: 10. 1128/IAI.73.5.2573-2585.2005 PMID: 15845459; PubMed Central PMCID: PMC1087358.
8. Ritchie JM, Waldor MK. The locus of enterocyte effacement-encoded effector proteins all promote enterohemorrhagic Escherichia coli pathogenicity in infant rabbits. Infection and immunity. 2005; 73 (3):1466-74. doi: 10.1128/IAI.73.3.1466-1474.2005 PMID: 15731044; PubMed Central PMCID: PMC1064977.
9. Elliott SJ, Sperandio V, Giron JA, Shin S, Mellies JL, Wainwright L, et al. The locus of enterocyte effacement (LEE)-encoded regulator controls expression of both LEE- and non-LEE-encoded virulence factors in enteropathogenic and enterohemorrhagic Escherichia coli. Infection and immunity. 2000; 68 (11):6115-26. PMID: 11035714; PubMed Central PMCID: PMC97688.
10. Li M, Rosenshine I, Tung SL, Wang XH, Friedberg D, Hew CL, et al. Comparative proteomic analysis of extracellular proteins of enterohemorrhagic and enteropathogenic Escherichia coli strains and their ihf and ler mutants. Applied and environmental microbiology. 2004; 70(9):5274-82. doi: 10.1128/AEM.70. 9.5274-5282.2004 PMID: 15345410; PubMed Central PMCID: PMC520853.
11. Torres AG, Lopez-Sanchez GN, Milflores-Flores L, Patel SD, Rojas-Lopez M, Martinez de la Pena CF, et al. Ler and H-NS, regulators controlling expression of the long polar fimbriae of Escherichia coli O157:H7. Journal of bacteriology. 2007; 189(16):5916-28. doi: 10.1128/JB.00245-07 PMID: 17586645; PubMed Central PMCID: PMC1952049.
12. Huang LH, Syu WJ. GrlA of enterohemorrhagic Escherichia coli O157:H7 activates lee1 by binding to the promoter region. Journal of microbiology, immunology, and infection 2008; 41(1):9-16. PMID: 18327421.
13. Iyoda S, Koizumi N, Satou H, Lu Y, Saitoh T, Ohnishi M, et al. The GrlR-GrlA regulatory system coordinately controls the expression of flagellar and LEE-encoded type III protein secretion systems in enterohemorrhagic Escherichia coli. Journal of bacteriology. 2006; 188(16):5682-92. doi: 10.1128/JB.00352-06 PMID: 16885436; PubMed Central PMCID: PMC1540053.
14. Tsai NP, Wu YC, Chen JW, Wu CF, Tzeng CM, Syu WJ. Multiple functions of l0036 in the regulation of the pathogenicity island of enterohaemorrhagic Escherichia coli O157:H7. The Biochemical journal. 2006; 393(Pt 2):591-9. doi: 10.1042/BJ20051201 PMID: 16248852; PubMed Central PMCID: PMC1360710.
15. Gauthier A, Puente JL, Finlay BB. Secretin of the enteropathogenic Escherichia coli type III secretion system requires components of the type III apparatus for assembly and localization. Infection and immunity. 2003; 71(6):3310-9. PMID: 12761113; PubMed Central PMCID: PMC155723.
16. Andrade A, Pardo JP, Espinosa N, Perez-Hernandez G, Gonzalez-Pedrajo B. Enzymatic characterization of the enteropathogenic Escherichia coli type III secretion ATPase EscN. Archives of biochemistry and biophysics. 2007; 468(1):121-7. doi: 10.1016/j.abb.2007.09.020 PMID: 17964526.
17. Lin CN, Sun WS, Lu HY, Ng SC, Liao YS, Syu WJ. Protein interactions and regulation of EscA in enterohemorrhagic E. coli. PloS one. 2014; 9(1):e85354. doi: 10.1371/journal.pone.0085354 PMID: 24454847; PubMed Central PMCID: PMC3890302.
18. Monjaras Feria J, Garcia-Gomez E, Espinosa N, Minamino T, Namba K, Gonzalez-Pedrajo B. Role of EscP (Orf16) in injectisome biogenesis and regulation of type III protein secretion in enteropathogenic Escherichia coli. Journal of bacteriology. 2012; 194(22):6029-45. doi: 10.1128/JB.01215-12 PMID: 22923600; PubMed Central PMCID: PMC3486364.
19. Lara-Tejero M, Kato J, Wagner S, Liu X, Galan JE. A sorting platform determines the order of protein secretion in bacterial type III systems. Science. 2011; 331(6021):1188-91. doi: 10.1126/science. 1201476 PMID: 21292939; PubMed Central PMCID: PMC3859126.
20. Wong AR, Raymond B, Collins JW, Crepin VF, Frankel G. The enteropathogenic E. coli effector EspH promotes actin pedestal formation and elongation via WASP-interacting protein (WIP). Cellular microbiology. 2012; 14(7):1051-70. doi: 10.1111/j.1462-5822.2012.01778.x PMID: 22372637.
21. Lovdok L, Bentele K, Vladimirov N, Muller A, Pop FS, Lebiedz D, et al. Role of translational coupling in robustness of bacterial chemotaxis pathway. PLoS biology. 2009; 7(8):e1000171. doi: 10.1371/journal. pbio.1000171 PMID: 19688030; PubMed Central PMCID: PMC2716512.
22. Schumperli D, McKenney K, Sobieski DA, Rosenberg M. Translational coupling at an intercistronic boundary of the Escherichia coli galactose operon. Cell. 1982; 30(3):865-71. PMID: 6754091.
23. McCarthy JE. Post-transcriptional control in the polycistronic operon environment: studies of the atp operon of Escherichia coli. Molecular microbiology. 1990; 4(8):1233-40. PMID: 2149159.
24. Mossey P, Das A. Expression of Agrobacterium tumefaciens octopine Ti-plasmid virB8 gene is regulated by translational coupling. Plasmid. 2013; 69(1):72-80. doi: 10.1016/j.plasmid.2012.09.002 PMID: 22990025.
25. Oppenheim DS, Yanofsky C. Translational coupling during expression of the tryptophan operon of Escherichia coli. Genetics. 1980; 95(4):785-95. PMID: 6162715; PubMed Central PMCID: PMC1214269.
26. Romo-Castillo M, Andrade A, Espinosa N, Monjaras Feria J, Soto E, Diaz-Guerrero M, et al. EscO, a functional and structural analog of the flagellar FliJ protein, is a positive regulator of EscN ATPase activity of the enteropathogenic Escherichia coli injectisome. Journal of bacteriology. 2014; 196(12):2227-41. doi: 10.1128/JB.01551-14 PMID: 24706741; PubMed Central PMCID: PMC4054183.
27. Sperandio V, Mellies JL, Delahay RM, Frankel G, Crawford JA, Nguyen W, et al. Activation of enteropathogenic Escherichia coli (EPEC) lee2 and lee3 operons by Ler. Molecular microbiology. 2000; 38 (4):781-93. PMID: 11115113.
28. Umanski T, Rosenshine I, Friedberg D. Thermoregulated expression of virulence genes in enteropathogenic Escherichia coli. Microbiology. 2002; 148(Pt 9):2735-44. PMID: 12213920.
29. Abe H, Tatsuno I, Tobe T, Okutani A, Sasakawa C. Bicarbonate ion stimulates the expression of locus of enterocyte effacement-encoded genes in enterohemorrhagic Escherichia coli O157:H7. Infection and immunity. 2002; 70(7):3500-9. PMID: 12065489; PubMed Central PMCID: PMC128104.
30. Lin CN, Syu WJ, Sun WS, Chen JW, Chen TH, Don MJ, et al. A role of ygfZ in the Escherichia coli response to plumbagin challenge. Journal of biomedical science. 2010; 17:84. doi: 10.1186/1423-0127-17-84 PMID: 21059273; PubMed Central PMCID: PMC2989944.
31. Ku CP, Lio JC, Wang SH, Lin CN, Syu WJ. Identification of a third EspA-binding protein that forms part of the type III secretion system of enterohemorrhagic Escherichia coli. The Journal of biological chemistry. 2009; 284(3):1686-93. doi: 10.1074/jbc.M807478200 PMID: 19028682.
32. Bustamante VH, Santana FJ, Calva E, Puente JL. Transcriptional regulation of type III secretion genes in enteropathogenic Escherichia coli: Ler antagonizes H-NS-dependent repression. Molecular microbiology. 2001; 39(3):664-78. PMID: 11169107.
33. Burmann BM, Schweimer K, Luo X, Wahl MC, Stitt BL, Gottesman ME, et al. A NusE:NusG complex links transcription and translation. Science. 2010; 328(5977):501-4. doi: 10.1126/science.1184953 PMID: 20413501.
34. Proshkin S, Rahmouni AR, Mironov A, Nudler E. Cooperation between translating ribosomes and RNA polymerase in transcription elongation. Science. 2010; 328(5977):504-8. doi: 10.1126/science. 1184939 PMID: 20413502; PubMed Central PMCID: PMC2930199.
35. Lodato PB, Kaper JB. Post-transcriptional processing of the lee4 operon in enterohaemorrhagic Escherichia coli. Molecular microbiology. 2009; 71(2):273-90. doi: 10.1111/j.1365-2958.2008.06530.x PMID: 19019141; PubMed Central PMCID: PMC2782684.
36. Osterman IA, Evfratov SA, Sergiev PV, Dontsova OA. Comparison of mRNA features affecting translation initiation and reinitiation. Nucleic acids research. 2013; 41(1):474-86. doi: 10.1093/nar/gks989 PMID: 23093605; PubMed Central PMCID: PMC3592434.
37. Younis R, Bingle LE, Rollauer S, Munera D, Busby SJ, Johnson S, et al. SepL resembles an aberrant effector in binding to a class 1 type III secretion chaperone and carrying an N-terminal secretion signal. Journal of bacteriology. 2010; 192(22):6093-8. doi: 10.1128/JB.00760-10 PMID: 20833800; PubMed Central PMCID: PMC2976445.
38. Deng W, Li Y, Hardwidge PR, Frey EA, Pfuetzner RA, Lee S, et al. Regulation of type III secretion hierarchy of translocators and effectors in attaching and effacing bacterial pathogens. Infection and immunity. 2005; 73(4):2135-46. doi: 10.1128/IAI.73.4.2135-2146.2005 PMID: 15784556; PubMed Central PMCID: PMC1087438.