-
1
-
-
79959264079
-
De novo transcriptome characterization and development of genomic tools for Scabiosa columbaria L. using next-generation sequencing techniques
-
Angeloni, F., Wagemaker, C. A., Jetten, M. S., Op den Camp, H. J., Janssen megens, E. M., Francoijs, K. J., et al. (2011). De novo transcriptome characterization and development of genomic tools for Scabiosa columbaria L. using next-generation sequencing techniques. Mol. Ecol. Resour. 11, 662-674. doi: 10.1111/j.1755-0998.2011.02990.x
-
(2011)
Mol. Ecol. Resour
, vol.11
, pp. 662-674
-
-
Angeloni, F.1
Wagemaker, C.A.2
Jetten, M.S.3
Op den Camp, H.J.4
Janssen megens, E.M.5
Francoijs, K.J.6
-
2
-
-
0035200891
-
Sucrose phosphate synthase activity rises in correlation with high-rate cellulose synthesis in three heterotrophic systems
-
Babb, V. M., and Haigler, C. H. (2001). Sucrose phosphate synthase activity rises in correlation with high-rate cellulose synthesis in three heterotrophic systems. Plant Physiol. 127, 1234-1242. doi: 10.1104/pp.010424
-
(2001)
Plant Physiol
, vol.127
, pp. 1234-1242
-
-
Babb, V.M.1
Haigler, C.H.2
-
3
-
-
39749107291
-
Inhibitory response of Raphanus sativus on lipid peroxidation in albino rats
-
Chaturvedi, P. (2008). Inhibitory response of Raphanus sativus on lipid peroxidation in albino rats. Evid. Based Complement. Alternat. Med. 5, 55-59. doi: 10.1093/ecam/nel077
-
(2008)
Evid. Based Complement. Alternat. Med
, vol.5
, pp. 55-59
-
-
Chaturvedi, P.1
-
4
-
-
0032910988
-
Genetic evidence that invertase-mediated release of hexoses is critical for appropriate carbon partitioning and normal seed development in maize
-
Cheng, W. H., and Chourey, P. S. (1999). Genetic evidence that invertase-mediated release of hexoses is critical for appropriate carbon partitioning and normal seed development in maize. Theor. Appl. Genet. 98, 485-495. doi: 10.1007/s001220051096
-
(1999)
Theor. Appl. Genet
, vol.98
, pp. 485-495
-
-
Cheng, W.H.1
Chourey, P.S.2
-
5
-
-
24644503098
-
Blast2GO: A universal tool for annotation, visualization and analysis in functional genomics research
-
Conesa, A., Götz, S., García Gómez, J. M., Terol, J., Talón, M., and Robles, M. (2005). Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics 21, 3674-3676. doi: 10.1093/bioinformatics/bti610
-
(2005)
Bioinformatics
, vol.21
, pp. 3674-3676
-
-
Conesa, A.1
Götz, S.2
García Gómez, J.M.3
Terol, J.4
Talón, M.5
Robles, M.6
-
6
-
-
0041732170
-
The noble radish: Past, present and future
-
Curtis, I. S. (2003). The noble radish: past, present and future. Trends Plant Sci. 8, 305-307. doi: 10.1016/S1360-1385(03)00127-4
-
(2003)
Trends Plant Sci
, vol.8
, pp. 305-307
-
-
Curtis, I.S.1
-
7
-
-
0034658655
-
Sucrose and the integration of metabolism in vascular plants
-
Farrar, J., Pollock, C., and Gallagher, J. (2000). Sucrose and the integration of metabolism in vascular plants. Plant Sci. 154, 1-11. doi: 10.1016/S0168-9452(99)00260-5
-
(2000)
Plant Sci
, vol.154
, pp. 1-11
-
-
Farrar, J.1
Pollock, C.2
Gallagher, J.3
-
8
-
-
79960264362
-
Full-length transcriptome assembly from RNA-Seq data without a reference genome
-
Grabherr, M. G., Haas, B. J., Yassour, M., Levin, J. Z., Thompson, D. A., Amit, I., et al. (2011). Full-length transcriptome assembly from RNA-Seq data without a reference genome. Nat. Biotechnol. 29, 644-652. doi: 10.1038/nbt.1883
-
(2011)
Nat. Biotechnol
, vol.29
, pp. 644-652
-
-
Grabherr, M.G.1
Haas, B.J.2
Yassour, M.3
Levin, J.Z.4
Thompson, D.A.5
Amit, I.6
-
9
-
-
28744448083
-
Raphanus sativus (Radish): Their chemistry and biology
-
Gutiérrez, R. M., and Perez, R. L. (2004). Raphanus sativus (Radish): their chemistry and biology. Scientific World Journal 4, 811-837. doi: 10.1100/tsw.2004.131
-
(2004)
Scientific World Journal
, vol.4
, pp. 811-837
-
-
Gutiérrez, R.M.1
Perez, R.L.2
-
10
-
-
84862000006
-
De novotranscriptome sequencing of Momordica cochinchinensis to identify genes involved in the carotenoid biosynthesis
-
Hyun, T. K., Rim, Y., Jang, H. J., Kim, C. H., Park, J., Kumar, R., et al. (2012). De novotranscriptome sequencing of Momordica cochinchinensis to identify genes involved in the carotenoid biosynthesis. Plant Mol. Biol. 79, 413-427. doi: 10.1007/s11103-012-9919-9
-
(2012)
Plant Mol. Biol
, vol.79
, pp. 413-427
-
-
Hyun, T.K.1
Rim, Y.2
Jang, H.J.3
Kim, C.H.4
Park, J.5
Kumar, R.6
-
11
-
-
0033290515
-
ESTScan: A program for detecting, evaluating, and reconstructing potential coding regions in EST sequences
-
Iseli, C., Jongeneel, C. V., and Bucher, P. (1999). ESTScan: a program for detecting, evaluating, and reconstructing potential coding regions in EST sequences. Proc. Int. Conf. Intell. Syst. Mol. Biol. 138-148.
-
(1999)
Proc. Int. Conf. Intell. Syst. Mol. Biol
, pp. 138-148
-
-
Iseli, C.1
Jongeneel, C.V.2
Bucher, P.3
-
12
-
-
18844404205
-
Evolution of genome size in Brassicaceae
-
Johnston, J. S., Pepper, A. E., Hall, A. E., Chen, Z. J., Hodnett, G., Drabek, J., et al. (2005). Evolution of genome size in Brassicaceae. Ann. Bot. 95, 229-235. doi: 10.1093/aob/mci016
-
(2005)
Ann. Bot
, vol.95
, pp. 229-235
-
-
Johnston, J.S.1
Pepper, A.E.2
Hall, A.E.3
Chen, Z.J.4
Hodnett, G.5
Drabek, J.6
-
13
-
-
84922020423
-
Draft sequences of the radish (Raphanus sativus L.) genome
-
Kitashiba, H., Li, F., Hirakawa, H., Kawanabe, T., Zou, Z., Hasegawa, Y., et al. (2014). Draft sequences of the radish (Raphanus sativus L.) genome. DNA Res. 21, 481-490. doi: 10.1093/dnares/dsu014
-
(2014)
DNA Res
, vol.21
, pp. 481-490
-
-
Kitashiba, H.1
Li, F.2
Hirakawa, H.3
Kawanabe, T.4
Zou, Z.5
Hasegawa, Y.6
-
14
-
-
0038642261
-
Gene expression activity and pathway selection for sucrose metabolism in developing storage root of sweet potato
-
Li, X. Q., and Zhang, D. (2003). Gene expression activity and pathway selection for sucrose metabolism in developing storage root of sweet potato. Plant Cell Physiol. 44, 630-636. doi: 10.1093/pcp/pcg080
-
(2003)
Plant Cell Physiol
, vol.44
, pp. 630-636
-
-
Li, X.Q.1
Zhang, D.2
-
15
-
-
84872131575
-
Research progresses on the key enzymes involved in sucrose metabolism in maize
-
Ren, X., and Zhang, J. (2013). Research progresses on the key enzymes involved in sucrose metabolism in maize. Carbohydr. Res. 368, 29-34. doi: 10.1016/j.carres.2012.10.016
-
(2013)
Carbohydr. Res
, vol.368
, pp. 29-34
-
-
Ren, X.1
Zhang, J.2
-
16
-
-
0034953548
-
Spatial and temporal distribution of sucrose synthase in the radish hypocotyl in relation to thickening growth
-
Rouhier, H., and Usuda, H. (2001). Spatial and temporal distribution of sucrose synthase in the radish hypocotyl in relation to thickening growth. Plant Cell Physiol.42, 583-593. doi: 10.1093/pcp/pce071
-
(2001)
Plant Cell Physiol
, vol.42
, pp. 583-593
-
-
Rouhier, H.1
Usuda, H.2
-
17
-
-
84866415109
-
Signaling role of sucrose metabolism in development
-
Ruan, Y. L. (2012). Signaling role of sucrose metabolism in development. Mol. Plant 5, 763-765. doi: 10.1093/mp/sss046
-
(2012)
Mol. Plant
, vol.5
, pp. 763-765
-
-
Ruan, Y.L.1
-
18
-
-
84899718242
-
Sucrose metabolism: Gateway to diverse carbon use and sugar signaling
-
Ruan, Y. L. (2014). Sucrose metabolism: gateway to diverse carbon use and sugar signaling. Annu. Rev. Plant Biol. 65, 33-67. doi: 10.1146/annurev-arplant-050213-040251
-
(2014)
Annu. Rev. Plant Biol
, vol.65
, pp. 33-67
-
-
Ruan, Y.L.1
-
19
-
-
84879705405
-
Interplay between sucrose and folate modulates auxin signaling in Arabidopsis
-
Stokes, M. E., Chattopadhyay, A., Wilkins, O., Nambara, E., and Campbell, M. M. (2013). Interplay between sucrose and folate modulates auxin signaling in Arabidopsis. Plant Physiol. 162, 1552-1565. doi: 10.1104/pp.113.215095
-
(2013)
Plant Physiol
, vol.162
, pp. 1552-1565
-
-
Stokes, M.E.1
Chattopadhyay, A.2
Wilkins, O.3
Nambara, E.4
Campbell, M.M.5
-
21
-
-
0032926830
-
Development of sink capacity of the "storage root" in a radish cultivar with a high ratio of "storage root" to shoot
-
Usuda, H., Demura, T., Shimogawara, K., and Fukuda, H. (1999). Development of sink capacity of the "storage root" in a radish cultivar with a high ratio of "storage root" to shoot. Plant Cell Physiol. 40, 369-377. doi: 10.1093/oxfordjournals.pcp.a029552
-
(1999)
Plant Cell Physiol
, vol.40
, pp. 369-377
-
-
Usuda, H.1
Demura, T.2
Shimogawara, K.3
Fukuda, H.4
-
22
-
-
0000785628
-
Sucrose synthase, starch accumulation, and tomato fruit sink strength
-
Wang, F., Sanz, A., Brenner, M. L., and Smith, A. (1993). Sucrose synthase, starch accumulation, and tomato fruit sink strength. Plant Physiol. 101, 321-327.
-
(1993)
Plant Physiol
, vol.101
, pp. 321-327
-
-
Wang, F.1
Sanz, A.2
Brenner, M.L.3
Smith, A.4
-
23
-
-
34347379550
-
-
Beijing: Scientific and Technical Documents Publishing House
-
Wang, L., and He, Q. (2005). Chinese Radish. Beijing: Scientific and Technical Documents Publishing House.
-
(2005)
Chinese Radish
-
-
Wang, L.1
He, Q.2
-
24
-
-
84864372943
-
Transcriptome analysis of the roots at early and late seedling stages using Illumina paired-end sequencing and development of EST-SSR markers in radish
-
Wang, S., Wang, X., He, Q., Liu, X., Xu, W., Li, L., et al. (2012). Transcriptome analysis of the roots at early and late seedling stages using Illumina paired-end sequencing and development of EST-SSR markers in radish. Plant Cell Rep. 31, 1437-1447. doi: 10.1007/s00299-012-1259-3
-
(2012)
Plant Cell Rep
, vol.31
, pp. 1437-1447
-
-
Wang, S.1
Wang, X.2
He, Q.3
Liu, X.4
Xu, W.5
Li, L.6
-
25
-
-
80052208252
-
Changes of sugar content and sucrose metabolizing enzyme activities during fleshy taproot development in radish (Raphanus sativus L.)
-
Wang, W., Gong, Y., Liu, L., Wang, Y., Jing, Z., Huang, D., et al. (2007). Changes of sugar content and sucrose metabolizing enzyme activities during fleshy taproot development in radish (Raphanus sativus L.). Acta Hortic. Sin. 34, 1313-1316. doi: 10.3321/j.issn:0513-353x.2007.05.043
-
(2007)
Acta Hortic. Sin
, vol.34
, pp. 1313-1316
-
-
Wang, W.1
Gong, Y.2
Liu, L.3
Wang, Y.4
Jing, Z.5
Huang, D.6
-
26
-
-
84888251195
-
De novo transcriptome sequencing of radish (Raphanus sativus L.) and analysis of major genes involved in glucosinolate metabolism
-
Wang, Y., Pan, Y., Liu, Z., Zhu, X., Zhai, L., Xu, L., et al. (2013). De novo transcriptome sequencing of radish (Raphanus sativus L.) and analysis of major genes involved in glucosinolate metabolism. BMC Genomics 14:836. doi: 10.1186/1471-2164-14-836
-
(2013)
BMC Genomics
, vol.14
, pp. 836
-
-
Wang, Y.1
Pan, Y.2
Liu, Z.3
Zhu, X.4
Zhai, L.5
Xu, L.6
-
27
-
-
78650502725
-
De novoassembly and characterization of root transcriptome using Illumina paired-end sequencing and development of cSSR markers in sweetpotato (Ipomoea batatas)
-
Wang, Z., Fang, B., Chen, J., Zhang, X., Luo, Z., Huang, L., et al. (2010). De novoassembly and characterization of root transcriptome using Illumina paired-end sequencing and development of cSSR markers in sweetpotato (Ipomoea batatas).BMC Genomics 11:726. doi: 10.1186/1471-2164-11-726
-
(2010)
BMC Genomics
, vol.11
, pp. 726
-
-
Wang, Z.1
Fang, B.2
Chen, J.3
Zhang, X.4
Luo, Z.5
Huang, L.6
-
28
-
-
84858593713
-
Strategies for transcriptome analysis in nonmodel plants
-
Ward, J. A., Ponnala, L., and Weber, C. A. (2012). Strategies for transcriptome analysis in nonmodel plants. Am. J. Bot. 99, 267-276. doi: 10.3732/ajb.1100334
-
(2012)
Am. J. Bot
, vol.99
, pp. 267-276
-
-
Ward, J.A.1
Ponnala, L.2
Weber, C.A.3
-
29
-
-
0031000565
-
Sugar import and metabolism during seed development
-
Weber, H., Borisjuk, L., and Wobus, U. (1997). Sugar import and metabolism during seed development. Trends Plant Sci. 2, 169-174. doi: 10.1016/S1360-1385(97)85222-3
-
(1997)
Trends Plant Sci
, vol.2
, pp. 169-174
-
-
Weber, H.1
Borisjuk, L.2
Wobus, U.3
-
30
-
-
80053316627
-
De novo transcriptome sequencing in Salvia miltiorrhiza to identify genes involved in the biosynthesis of active ingredients
-
Wenping, H., Yuan, Z., Jie, S., Lijun, Z., and Zhezhi, W. (2011). De novo transcriptome sequencing in Salvia miltiorrhiza to identify genes involved in the biosynthesis of active ingredients. Genomics 98, 272-279. doi: 10.1016/j.ygeno.2011.03.012
-
(2011)
Genomics
, vol.98
, pp. 272-279
-
-
Wenping, H.1
Yuan, Z.2
Jie, S.3
Lijun, Z.4
Zhezhi, W.5
-
31
-
-
84928125354
-
Sequencing, de novoassembly and comparative analysis of Raphanus sativus transcriptome
-
Wu, G., Zhang, L., Yin, Y., Wu, J., Yu, L., Zhou, Y., et al. (2015). Sequencing, de novoassembly and comparative analysis of Raphanus sativus transcriptome. Front. Plant Sci. 6:198. doi: 10.3389/fpls.2015.00198
-
(2015)
Front. Plant Sci
, vol.6
, pp. 198
-
-
Wu, G.1
Zhang, L.2
Yin, Y.3
Wu, J.4
Yu, L.5
Zhou, Y.6
-
32
-
-
84876287130
-
Glucose-TOR signalling reprograms the transcriptome and activates meristems
-
Xiong, Y., McCormack, M., Li, L., Hall, Q., Xiang, C., and Sheen, J. (2013). Glucose-TOR signalling reprograms the transcriptome and activates meristems. Nature 496, 181-186. doi: 10.1038/nature12030
-
(2013)
Nature
, vol.496
, pp. 181-186
-
-
Xiong, Y.1
McCormack, M.2
Li, L.3
Hall, Q.4
Xiang, C.5
Sheen, J.6
-
33
-
-
84864768408
-
Evaluation of reference genes for gene expression studies in radish (Raphanus sativus L.) using quantitative real-time PCR
-
Xu, Y., Zhu, X., Gong, Y., Xu, L., Wang, Y., Liu, L., et al. (2012). Evaluation of reference genes for gene expression studies in radish (Raphanus sativus L.) using quantitative real-time PCR. Biochem. Biophys. Res. Commun. 3, 398-403. doi: 10.1016/j.bbrc.2012.06.119
-
(2012)
Biochem. Biophys. Res. Commun
, vol.3
, pp. 398-403
-
-
Xu, Y.1
Zhu, X.2
Gong, Y.3
Xu, L.4
Wang, Y.5
Liu, L.6
-
34
-
-
84879062749
-
Sugar promotes vegetative phase change in Arabidopsis thaliana by repressing the expression of MIR156A and MIR156C
-
Yang, L., Xu, M., Koo, Y., He, J., and Poethig, R. S. (2013). Sugar promotes vegetative phase change in Arabidopsis thaliana by repressing the expression of MIR156A and MIR156C. Elife 2:e00260. doi: 10.7554/eLife.00260
-
(2013)
Elife
, vol.2
-
-
Yang, L.1
Xu, M.2
Koo, Y.3
He, J.4
Poethig, R.S.5
-
35
-
-
33747846582
-
WEGO: A web tool for plotting GO annotations
-
Ye, J., Fang, L., Zheng, H., Zhang, Y., Chen, J., Zhang, Z., et al. (2006). WEGO: a web tool for plotting GO annotations. Nucleic Acids Res. 34, W293-W297. doi: 10.1093/nar/gkl031
-
(2006)
Nucleic Acids Res
, vol.34
, pp. W293-W297
-
-
Ye, J.1
Fang, L.2
Zheng, H.3
Zhang, Y.4
Chen, J.5
Zhang, Z.6
-
36
-
-
84893047898
-
Transcriptome analysis of leaf tissue of Raphanus sativus by RNA sequencing
-
Zhang, L., Jia, H., Yin, Y., Wu, G., Xia, H., Wang, X., et al. (2013). Transcriptome analysis of leaf tissue of Raphanus sativus by RNA sequencing. PLoS ONE 8:e80350. doi: 10.1371/journal.pone.0080350
-
(2013)
PLoS ONE
, vol.8
-
-
Zhang, L.1
Jia, H.2
Yin, Y.3
Wu, G.4
Xia, H.5
Wang, X.6
-
37
-
-
84921888726
-
Transcriptomic identification and expression of starch and sucrose metabolism genes in the seeds of Chinese Chestnut (Castanea mollissima)
-
Zhang, L., Lin, Q., Feng, Y., Fan, X., Zou, F., Yuan, D. Y., et al. (2015). Transcriptomic identification and expression of starch and sucrose metabolism genes in the seeds of Chinese Chestnut (Castanea mollissima). J. Agric. Food Chem. 63, 929-942. doi: 10.1021/jf505247d
-
(2015)
J. Agric. Food Chem
, vol.63
, pp. 929-942
-
-
Zhang, L.1
Lin, Q.2
Feng, Y.3
Fan, X.4
Zou, F.5
Yuan, D.Y.6
|