메뉴 건너뛰기




Volumn 12, Issue 4, 2016, Pages

Mutational History of a Human Cell Lineage from Somatic to Induced Pluripotent Stem Cells

Author keywords

[No Author keywords available]

Indexed keywords

CYTOSINE;

EID: 84964803284     PISSN: 15537390     EISSN: 15537404     Source Type: Journal    
DOI: 10.1371/journal.pgen.1005932     Document Type: Article
Times cited : (87)

References (25)
  • 1
    • 64749094310 scopus 로고    scopus 로고
    • The cancer genome
    • 19360079, ().:–
    • Stratton MR, Campbell PJ, Futreal PA, (2009) The cancer genome. Nature458: 719–724. doi: 10.1038/nature0794319360079
    • (2009) Nature , vol.458 , pp. 719-724
    • Stratton, M.R.1    Campbell, P.J.2    Futreal, P.A.3
  • 2
    • 74449093973 scopus 로고    scopus 로고
    • A comprehensive catalogue of somatic mutations from a human cancer genome
    • 20016485, . ().:–
    • Pleasance ED, Cheetham RK, Stephens PJ, McBride DJ, Humphray SJ, et al. (2010) A comprehensive catalogue of somatic mutations from a human cancer genome. Nature463: 191–196. doi: 10.1038/nature0865820016485
    • (2010) Nature , vol.463 , pp. 191-196
    • Pleasance, E.D.1    Cheetham, R.K.2    Stephens, P.J.3    McBride, D.J.4    Humphray, S.J.5
  • 3
    • 84861541343 scopus 로고    scopus 로고
    • Mutational processes molding the genomes of 21 breast cancers
    • 22608084, . ().:–
    • Nik-Zainal S, Alexandrov LB, Wedge DC, Van Loo P, Greenman CD, et al. (2012) Mutational processes molding the genomes of 21 breast cancers. Cell149: 979–993. doi: 10.1016/j.cell.2012.04.02422608084
    • (2012) Cell , vol.149 , pp. 979-993
    • Nik-Zainal, S.1    Alexandrov, L.B.2    Wedge, D.C.3    Van Loo, P.4    Greenman, C.D.5
  • 4
    • 84882837534 scopus 로고    scopus 로고
    • Signatures of mutational processes in human cancer
    • 23945592, . ().:–
    • Alexandrov LB, Nik-Zainal S, Wedge DC, Aparicio SA, Behjati S, et al. (2013) Signatures of mutational processes in human cancer. Nature500: 415–421. doi: 10.1038/nature1247723945592
    • (2013) Nature , vol.500 , pp. 415-421
    • Alexandrov, L.B.1    Nik-Zainal, S.2    Wedge, D.C.3    Aparicio, S.A.4    Behjati, S.5
  • 5
    • 79953766940 scopus 로고    scopus 로고
    • Tumour evolution inferred by single-cell sequencing
    • 21399628, . ().:–
    • Navin N, Kendall J, Troge J, Andrews P, Rodgers L, et al. (2011) Tumour evolution inferred by single-cell sequencing. Nature472: 90–94. doi: 10.1038/nature0980721399628
    • (2011) Nature , vol.472 , pp. 90-94
    • Navin, N.1    Kendall, J.2    Troge, J.3    Andrews, P.4    Rodgers, L.5
  • 6
    • 84862776906 scopus 로고    scopus 로고
    • Clonal evolution in relapsed acute myeloid leukaemia revealed by whole-genome sequencing
    • 22237025, . ().:–
    • Ding L, Ley TJ, Larson DE, Miller CA, Koboldt DC, et al. (2012) Clonal evolution in relapsed acute myeloid leukaemia revealed by whole-genome sequencing. Nature481: 506–510. doi: 10.1038/nature1073822237025
    • (2012) Nature , vol.481 , pp. 506-510
    • Ding, L.1    Ley, T.J.2    Larson, D.E.3    Miller, C.A.4    Koboldt, D.C.5
  • 7
    • 36248966518 scopus 로고    scopus 로고
    • Induction of pluripotent stem cells from adult human fibroblasts by defined factors
    • 18035408, . ().:–
    • Takahashi K, Tanabe K, Ohnuki M, Narita M, Ichisaka T, et al. (2007) Induction of pluripotent stem cells from adult human fibroblasts by defined factors. Cell131: 861–872. 18035408
    • (2007) Cell , vol.131 , pp. 861-872
    • Takahashi, K.1    Tanabe, K.2    Ohnuki, M.3    Narita, M.4    Ichisaka, T.5
  • 8
    • 79952258224 scopus 로고    scopus 로고
    • Somatic coding mutations in human induced pluripotent stem cells
    • 21368825, . ().:–
    • Gore A, Li Z, Fung HL, Young JE, Agarwal S, et al. (2011) Somatic coding mutations in human induced pluripotent stem cells. Nature471: 63–67. doi: 10.1038/nature0980521368825
    • (2011) Nature , vol.471 , pp. 63-67
    • Gore, A.1    Li, Z.2    Fung, H.L.3    Young, J.E.4    Agarwal, S.5
  • 9
    • 84860644898 scopus 로고    scopus 로고
    • Background mutations in parental cells account for most of the genetic heterogeneity of induced pluripotent stem cells
    • 22542160, . ().:–
    • Young MA, Larson DE, Sun CW, George DR, Ding L, et al. (2012) Background mutations in parental cells account for most of the genetic heterogeneity of induced pluripotent stem cells. Cell Stem Cell10: 570–582. doi: 10.1016/j.stem.2012.03.00222542160
    • (2012) Cell Stem Cell , vol.10 , pp. 570-582
    • Young, M.A.1    Larson, D.E.2    Sun, C.W.3    George, D.R.4    Ding, L.5
  • 10
    • 84872920388 scopus 로고    scopus 로고
    • A practical and efficient cellular substrate for the generation of induced pluripotent stem cells from adults: blood-derived endothelial progenitor cells
    • 23283547, . ().:–
    • Geti I, Ormiston ML, Rouhani F, Toshner M, Movassagh M, et al. (2012) A practical and efficient cellular substrate for the generation of induced pluripotent stem cells from adults: blood-derived endothelial progenitor cells. Stem Cells Transl Med1: 855–865. doi: 10.5966/sctm.2012-009323283547
    • (2012) Stem Cells Transl Med , vol.1 , pp. 855-865
    • Geti, I.1    Ormiston, M.L.2    Rouhani, F.3    Toshner, M.4    Movassagh, M.5
  • 11
    • 80054987997 scopus 로고    scopus 로고
    • Targeted gene correction of alpha1-antitrypsin deficiency in induced pluripotent stem cells
    • 21993621, . ().:–
    • Yusa K, Rashid ST, Strick-Marchand H, Varela I, Liu PQ, et al. (2011) Targeted gene correction of alpha1-antitrypsin deficiency in induced pluripotent stem cells. Nature478: 391–394. doi: 10.1038/nature1042421993621
    • (2011) Nature , vol.478 , pp. 391-394
    • Yusa, K.1    Rashid, S.T.2    Strick-Marchand, H.3    Varela, I.4    Liu, P.Q.5
  • 12
    • 77956354416 scopus 로고    scopus 로고
    • Modeling inherited metabolic disorders of the liver using human induced pluripotent stem cells
    • 20739751, . ().:–
    • Rashid ST, Corbineau S, Hannan N, Marciniak SJ, Miranda E, et al. (2010) Modeling inherited metabolic disorders of the liver using human induced pluripotent stem cells. J Clin Invest120: 3127–3136. doi: 10.1172/JCI4312220739751
    • (2010) J Clin Invest , vol.120 , pp. 3127-3136
    • Rashid, S.T.1    Corbineau, S.2    Hannan, N.3    Marciniak, S.J.4    Miranda, E.5
  • 13
    • 84903452732 scopus 로고    scopus 로고
    • Genetic background drives transcriptional variation in human induced pluripotent stem cells
    • 24901476, . ().:
    • Rouhani F, Kumasaka N, de Brito MC, Bradley A, Vallier L, et al. (2014) Genetic background drives transcriptional variation in human induced pluripotent stem cells. PLoS Genet10: e1004432. doi: 10.1371/journal.pgen.100443224901476
    • (2014) PLoS Genet , vol.10 , pp. e1004432
    • Rouhani, F.1    Kumasaka, N.2    de Brito, M.C.3    Bradley, A.4    Vallier, L.5
  • 16
    • 84861550476 scopus 로고    scopus 로고
    • The life history of 21 breast cancers
    • 22608083, . ().:–
    • Nik-Zainal S, Van Loo P, Wedge DC, Alexandrov LB, Greenman CD, et al. (2012) The life history of 21 breast cancers. Cell149: 994–1007. doi: 10.1016/j.cell.2012.04.02322608083
    • (2012) Cell , vol.149 , pp. 994-1007
    • Nik-Zainal, S.1    Van Loo, P.2    Wedge, D.C.3    Alexandrov, L.B.4    Greenman, C.D.5
  • 17
    • 84892699941 scopus 로고    scopus 로고
    • Heterogeneity of genomic evolution and mutational profiles in multiple myeloma
    • 24429703, . ().:
    • Bolli N, Avet-Loiseau H, Wedge DC, Van Loo P, Alexandrov LB, et al. (2014) Heterogeneity of genomic evolution and mutational profiles in multiple myeloma. Nat Commun5: 2997. doi: 10.1038/ncomms399724429703
    • (2014) Nat Commun , vol.5 , pp. 2997
    • Bolli, N.1    Avet-Loiseau, H.2    Wedge, D.C.3    Van Loo, P.4    Alexandrov, L.B.5
  • 18
    • 84865208871 scopus 로고    scopus 로고
    • Rate of de novo mutations and the importance of father's age to disease risk
    • 22914163, . ().:–
    • Kong A, Frigge ML, Masson G, Besenbacher S, Sulem P, et al. (2012) Rate of de novo mutations and the importance of father's age to disease risk. Nature488: 471–475. doi: 10.1038/nature1139622914163
    • (2012) Nature , vol.488 , pp. 471-475
    • Kong, A.1    Frigge, M.L.2    Masson, G.3    Besenbacher, S.4    Sulem, P.5
  • 19
    • 84904438894 scopus 로고    scopus 로고
    • 8-oxoguanine causes spontaneous de novo germline mutations in mice
    • 24732879, . ().:
    • Ohno M, Sakumi K, Fukumura R, Furuichi M, Iwasaki Y, et al. (2014) 8-oxoguanine causes spontaneous de novo germline mutations in mice. Sci Rep4: 4689. doi: 10.1038/srep0468924732879
    • (2014) Sci Rep , vol.4 , pp. 4689
    • Ohno, M.1    Sakumi, K.2    Fukumura, R.3    Furuichi, M.4    Iwasaki, Y.5
  • 20
    • 84871410004 scopus 로고    scopus 로고
    • Somatic copy number mosaicism in human skin revealed by induced pluripotent stem cells
    • 23160490, . ().:–
    • Abyzov A, Mariani J, Palejev D, Zhang Y, Haney MS, et al. (2012) Somatic copy number mosaicism in human skin revealed by induced pluripotent stem cells. Nature492: 438–442. doi: 10.1038/nature1162923160490
    • (2012) Nature , vol.492 , pp. 438-442
    • Abyzov, A.1    Mariani, J.2    Palejev, D.3    Zhang, Y.4    Haney, M.S.5
  • 21
    • 84863229606 scopus 로고    scopus 로고
    • Low incidence of DNA sequence variation in human induced pluripotent stem cells generated by nonintegrating plasmid expression
    • 22385660, . ().:–
    • Cheng L, Hansen NF, Zhao L, Du Y, Zou C, et al. (2012) Low incidence of DNA sequence variation in human induced pluripotent stem cells generated by nonintegrating plasmid expression. Cell Stem Cell10: 337–344. doi: 10.1016/j.stem.2012.01.00522385660
    • (2012) Cell Stem Cell , vol.10 , pp. 337-344
    • Cheng, L.1    Hansen, N.F.2    Zhao, L.3    Du, Y.4    Zou, C.5
  • 22
    • 78951484462 scopus 로고    scopus 로고
    • Homologous recombination conserves DNA sequence integrity throughout the cell cycle in embryonic stem cells
    • 20491544, . ().:–
    • Serrano L, Liang L, Chang Y, Deng L, Maulion C, et al. (2011) Homologous recombination conserves DNA sequence integrity throughout the cell cycle in embryonic stem cells. Stem Cells Dev20: 363–374. doi: 10.1089/scd.2010.015920491544
    • (2011) Stem Cells Dev , vol.20 , pp. 363-374
    • Serrano, L.1    Liang, L.2    Chang, Y.3    Deng, L.4    Maulion, C.5
  • 23
    • 78049381196 scopus 로고    scopus 로고
    • Mouse embryonic stem cells, but not somatic cells, predominantly use homologous recombination to repair double-strand DNA breaks
    • 20446816, . ().:–
    • Tichy ED, Pillai R, Deng L, Liang L, Tischfield J, et al. (2010) Mouse embryonic stem cells, but not somatic cells, predominantly use homologous recombination to repair double-strand DNA breaks. Stem Cells Dev19: 1699–1711. doi: 10.1089/scd.2010.005820446816
    • (2010) Stem Cells Dev , vol.19 , pp. 1699-1711
    • Tichy, E.D.1    Pillai, R.2    Deng, L.3    Liang, L.4    Tischfield, J.5
  • 24
    • 34250206996 scopus 로고    scopus 로고
    • A ROCK inhibitor permits survival of dissociated human embryonic stem cells
    • 17529971, . ().:–
    • Watanabe K, Ueno M, Kamiya D, Nishiyama A, Matsumura M, et al. (2007) A ROCK inhibitor permits survival of dissociated human embryonic stem cells. Nat Biotechnol25: 681–686. 17529971
    • (2007) Nat Biotechnol , vol.25 , pp. 681-686
    • Watanabe, K.1    Ueno, M.2    Kamiya, D.3    Nishiyama, A.4    Matsumura, M.5
  • 25
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • 19451168, ().:–
    • Li H, Durbin R, (2009) Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics25: 1754–1760. doi: 10.1093/bioinformatics/btp32419451168
    • (2009) Bioinformatics , vol.25 , pp. 1754-1760
    • Li, H.1    Durbin, R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.