-
2
-
-
36749008989
-
Comparative sialomics between hard and soft ticks: Implications for the evolution of blood-feeding behavior
-
Mans BJ, Andersen JF, Francischetti IMB, Valenzuela JG, Schwan TG, Pham VM, Garfield MK, Hammer CH, Ribeiro JMC: Comparative sialomics between hard and soft ticks: Implications for the evolution of blood-feeding behavior. Insect Biochem Mol Biol 2008, 38(1):42-58.
-
(2008)
Insect Biochem Mol Biol
, vol.38
, Issue.1
, pp. 42-58
-
-
Mans, B.J.1
Andersen, J.F.2
Francischetti, I.M.B.3
Valenzuela, J.G.4
Schwan, T.G.5
Pham, V.M.6
Garfield, M.K.7
Hammer, C.H.8
Ribeiro, J.M.C.9
-
3
-
-
78751591405
-
Molecular identification and expression analysis of lipocalins from blood feeding taiga tick ixodes persulcatus schulze
-
Konnai S, Nishikado H, Yamada S, Imamura S, Ito T, Onuma M, Murata S, Ohashi K: Molecular identification and expression analysis of lipocalins from blood feeding taiga tick, Ixodes persulcatus Schulze. Exp Parasitol 2011, 127(2):467-474.
-
(2011)
Exp Parasitol
, vol.127
, Issue.2
, pp. 467-474
-
-
Konnai, S.1
Nishikado, H.2
Yamada, S.3
Imamura, S.4
Ito, T.5
Onuma, M.6
Murata, S.7
Ohashi, K.8
-
4
-
-
84864751098
-
Analysis of babesia bovis infection-induced gene expression changes in larvae from the cattle tick rhipicephalus (boophilus) microplus
-
Heekin A, Guerrero F, Bendele K, Saldivar L, Scoles G, Gondro C, Nene V, Djikeng A, Brayton K: Analysis of Babesia bovis infection-induced gene expression changes in larvae from the cattle tick, Rhipicephalus (Boophilus) microplus. Parasit Vectors 2012, 5(1):162.
-
(2012)
Parasit Vectors
, vol.5
, Issue.1
, pp. 162
-
-
Heekin, A.1
Guerrero, F.2
Bendele, K.3
Saldivar, L.4
Scoles, G.5
Gondro, C.6
Nene, V.7
Djikeng, A.8
Brayton, K.9
-
5
-
-
0036008681
-
A high affinity serotonin-And histamine-binding lipocalin from tick saliva
-
Sangamnatdej S, Paesen GC, Slovak M, Nuttall PA: A high affinity serotonin-And histamine-binding lipocalin from tick saliva. Insect Mol Biol 2002, 11(1):79-86.
-
(2002)
Insect Mol Biol
, vol.11
, Issue.1
, pp. 79-86
-
-
Sangamnatdej, S.1
Paesen, G.C.2
Slovak, M.3
Nuttall, P.A.4
-
6
-
-
0033040796
-
Tick histaminebinding proteins: Isolation, cloning, and three-dimensional structure
-
Paesen GC, Adams PL, Harlos K, Nuttall PA, Stuart DI: Tick histaminebinding proteins: isolation, cloning, and three-dimensional structure. Mol Cell 1999, 3(5):661-671.
-
(1999)
Mol Cell
, vol.3
, Issue.5
, pp. 661-671
-
-
Paesen, G.C.1
Adams, P.L.2
Harlos, K.3
Nuttall, P.A.4
Stuart, D.I.5
-
7
-
-
84907441092
-
The sialotranscriptome of amblyomma triste, amblyomma parvum and amblyomma cajennense ticks, uncovered by 454-based RNA-seq
-
Garcia G, Gardinassi L, Ribeiro J, Anatriello E, Ferreira B, Moreira HN, Mafra C, Martins M, Szabo MP, de Miranda-Santos IK, Maruyama S: The sialotranscriptome of Amblyomma triste, Amblyomma parvum and Amblyomma cajennense ticks, uncovered by 454-based RNA-seq. Parasit Vectors 2014, 7(1):430.
-
(2014)
Parasit Vectors
, vol.7
, Issue.1
, pp. 430
-
-
Garcia, G.1
Gardinassi, L.2
Ribeiro, J.3
Anatriello, E.4
Ferreira, B.5
Moreira, H.N.6
Mafra, C.7
Martins, M.8
Szabo, M.P.9
De Miranda-Santos, I.K.10
Maruyama, S.11
-
8
-
-
84857446182
-
The future of molecular dynamics simulations in drug discovery
-
Borhani D, Shaw D: The future of molecular dynamics simulations in drug discovery. J Comput Aided Mol Des 2012, 26(1):15-26.
-
(2012)
J Comput Aided Mol des
, vol.26
, Issue.1
, pp. 15-26
-
-
Borhani, D.1
Shaw, D.2
-
9
-
-
84905460438
-
Membrane interaction of bound ligands contributes to the negative binding cooperativity of the egf receptor
-
Arkhipov A, Shan Y, Kim ET, Shaw DE: Membrane interaction of bound ligands contributes to the negative binding cooperativity of the EGF receptor. PLoS Comput Biol 2014, 10(7):e1003742.
-
(2014)
PLoS Comput Biol
, vol.10
, Issue.7
, pp. e1003742
-
-
Arkhipov, A.1
Shan, Y.2
Kim, E.T.3
Shaw, D.E.4
-
10
-
-
81755163613
-
Activation mechanism of the β-Adrenergic receptor
-
Dror RO, Arlow DH, Maragakis P, Mildorf TJ, Pan AC, Xu H, Borhani DW, Shaw DE: Activation mechanism of the β-Adrenergic receptor. Proc Natl Acad Sci U S A 2011, 108(46):18684-18689.
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, Issue.46
, pp. 18684-18689
-
-
Dror, R.O.1
Arlow, D.H.2
Maragakis, P.3
Mildorf, T.J.4
Pan, A.C.5
Xu, H.6
Borhani, D.W.7
Shaw, D.E.8
-
11
-
-
84884604436
-
Kinetics and computational studies of ligand migration in nitrophorin 7 and its ?1-3 mutant
-
Oliveira A, Allegri A, Bidon-Chanal A, Knipp M, Roitberg AE, Abbruzzetti S, Viappiani C, Luque FJ: Kinetics and computational studies of ligand migration in nitrophorin 7 and its ?1-3 mutant. Biochim Biophys Acta Proteins Proteom 2013, 1834(9):1711-1721.
-
(2013)
Biochim Biophys Acta Proteins Proteom
, vol.1834
, Issue.9
, pp. 1711-1721
-
-
Oliveira, A.1
Allegri, A.2
Bidon-Chanal, A.3
Knipp, M.4
Roitberg, A.E.5
Abbruzzetti, S.6
Viappiani, C.7
Luque, F.J.8
-
12
-
-
7244255757
-
Protein functional cycle viewed at atomic resolution: Conformational change and mobility in nitrophorin 4 as a function of ph and no binding
-
Kondrashov DA, Roberts SA, Weichsel A, Montfort WR: Protein functional cycle viewed at atomic resolution: conformational change and mobility in nitrophorin 4 as a function of pH and NO binding. Biochemistry (Mosc) 2004, 43:13637-13647.
-
(2004)
Biochemistry (Mosc
, vol.43
, pp. 13637-13647
-
-
Kondrashov, D.A.1
Roberts, S.A.2
Weichsel, A.3
Montfort, W.R.4
-
13
-
-
34147107263
-
Pele: Protein energy landscape exploration. A novel monte carlo based technique
-
Borrelli KW, Vitalis A, Alcantara R, Guallar V: PELE: protein energy landscape exploration. A novel Monte Carlo based technique. J Chem Theory Comput 2005, 1(6):1304-1311.
-
(2005)
J Chem Theory Comput
, vol.1
, Issue.6
, pp. 1304-1311
-
-
Borrelli, K.W.1
Vitalis, A.2
Alcantara, R.3
Guallar, V.4
-
14
-
-
84883570891
-
Pele web server: Atomistic study of biomolecular systems at your fingertips
-
Madadkar-Sobhani A, Guallar V: PELE web server: atomistic study of biomolecular systems at your fingertips. Nucleic Acids Res 2013, 41:W322-W328.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. W322-W328
-
-
Madadkar-Sobhani, A.1
Guallar, V.2
-
15
-
-
34548283148
-
Scalable algorithms for molecular dynamics simulations on commodity clusters
-
11-17 November 2006. Tampa, Florida. New York, NY: ACM/IEEE
-
Bowers KJ, Chow E, Huageng X, Dror RO, Eastwood MP, Gregersen BA, Klepeis JL, Kolossvary I, Moraes MA, Sacerdoti FD, Salmon JK, Yibing S, Shaw DE: Scalable Algorithms for Molecular Dynamics Simulations on Commodity Clusters. In Proceedings of the ACM/IEEE Conference on Supercomputing (SC06): 11-17 November 2006. Tampa, Florida. New York, NY: ACM/IEEE; 2006:43-56.
-
(2006)
Proceedings of the ACM/IEEE Conference on Supercomputing (SC06)
, pp. 43-56
-
-
Bowers, K.J.1
Chow, E.2
Huageng, X.3
Dror, R.O.4
Eastwood, M.P.5
Gregersen, B.A.6
Klepeis, J.L.7
Kolossvary, I.8
Moraes, M.A.9
Sacerdoti, F.D.10
Salmon, J.K.11
Yibing, S.12
Shaw, D.E.13
-
16
-
-
33847034125
-
Assignment of polar states for protein amino acid residues using an interaction cluster decomposition algorithm and its application to high resolution protein structure modeling
-
Li X, Jacobson MP, Zhu K, Zhao S, Friesner RA: Assignment of polar states for protein amino acid residues using an interaction cluster decomposition algorithm and its application to high resolution protein structure modeling. Proteins Struct Funct Bioinf 2007, 66(4):824-837.
-
(2007)
Proteins Struct Funct Bioinf
, vol.66
, Issue.4
, pp. 824-837
-
-
Li, X.1
Jacobson, M.P.2
Zhu, K.3
Zhao, S.4
Friesner, R.A.5
-
17
-
-
1842532008
-
A hierarchical approach to all-Atom protein loop prediction
-
Jacobson MP, Pincus DL, Rapp CS, Day TJ, Honig B, Shaw DE, Friesner RA: A hierarchical approach to all-Atom protein loop prediction. Proteins Struct Funct Bioinf 2004, 55(2):351-367.
-
(2004)
Proteins Struct Funct Bioinf
, vol.55
, Issue.2
, pp. 351-367
-
-
Jacobson, M.P.1
Pincus, D.L.2
Rapp, C.S.3
Day, T.J.4
Honig, B.5
Shaw, D.E.6
Friesner, R.A.7
-
18
-
-
0035132230
-
Anisotropy of fluctuation dynamics of proteins with an elastic network model
-
Atilgan AR, Durell SR, Jernigan RL, Demirel MC, Keskin O, Bahar I: Anisotropy of fluctuation dynamics of proteins with an elastic network model. Biophys J 2001, 80(1):505-515.
-
(2001)
Biophys J
, vol.80
, Issue.1
, pp. 505-515
-
-
Atilgan, A.R.1
Durell, S.R.2
Jernigan, R.L.3
Demirel, M.C.4
Keskin, O.5
Bahar, I.6
-
19
-
-
0036310711
-
On the role of the crystal environment in determining protein side-chain conformations
-
Jacobson MP, Friesner RA, Xiang Z, Honig B: On the role of the crystal environment in determining protein side-chain conformations. J Mol Biol 2002, 320(3):597-608.
-
(2002)
J Mol Biol
, vol.320
, Issue.3
, pp. 597-608
-
-
Jacobson, M.P.1
Friesner, R.A.2
Xiang, Z.3
Honig, B.4
-
20
-
-
0344778061
-
Semianalytical treatment of solvation for molecular mechanics and dynamics
-
Still WC, Tempczyk A, Hawley RC, Hendrickson T: Semianalytical treatment of solvation for molecular mechanics and dynamics. J Am Chem Soc 1990, 112(16):6127-6129.
-
(1990)
J Am Chem Soc
, vol.112
, Issue.16
, pp. 6127-6129
-
-
Still, W.C.1
Tempczyk, A.2
Hawley, R.C.3
Hendrickson, T.4
-
21
-
-
33645941402
-
The opls [optimized potentials for liquid simulations] potential functions for proteins, energy minimizations for crystals of cyclic peptides and crambin
-
Jorgensen WL, Tirado-Rives J: The OPLS [optimized potentials for liquid simulations] potential functions for proteins, energy minimizations for crystals of cyclic peptides and crambin. J Am Chem Soc 1988, 110(6):1657-1666.
-
(1988)
J Am Chem Soc
, vol.110
, Issue.6
, pp. 1657-1666
-
-
Jorgensen, W.L.1
Tirado-Rives, J.2
-
22
-
-
0001858251
-
Application of a theory of enzyme specificity to protein synthesis
-
Koshland DE: Application of a theory of enzyme specificity to protein synthesis. Proc Natl Acad Sci U S A 1958, 44(2):98-104.
-
(1958)
Proc Natl Acad Sci U S A
, vol.44
, Issue.2
, pp. 98-104
-
-
Koshland, D.E.1
-
23
-
-
4444221565
-
Ucsf chimera-A visualization system for exploratory research and analysis
-
Pettersen EF, Goddard TD, Huang CC, Couch GS, Greenblatt DM, Meng EC, Ferrin TE: UCSF Chimera-A visualization system for exploratory research and analysis. J Comput Chem 2004, 25(13):1605-1612.
-
(2004)
J Comput Chem
, vol.25
, Issue.13
, pp. 1605-1612
-
-
Pettersen, E.F.1
Goddard, T.D.2
Huang, C.C.3
Couch, G.S.4
Greenblatt, D.M.5
Meng, E.C.6
Ferrin, T.E.7
-
25
-
-
79960070651
-
Structure of the human histamine h1 receptor complex with doxepin
-
Shimamura T, Shiroishi M, Weyand S, Tsujimoto H, Winter G, Katritch V, Abagyan R, Cherezov V, Liu W, Han GW, Kobayashi T, Stevens RC, Iwata S: Structure of the human histamine H1 receptor complex with doxepin. Nature 2011, 475(7354):65-70.
-
(2011)
Nature
, vol.475
, Issue.7354
, pp. 65-70
-
-
Shimamura, T.1
Shiroishi, M.2
Weyand, S.3
Tsujimoto, H.4
Winter, G.5
Katritch, V.6
Abagyan, R.7
Cherezov, V.8
Liu, W.9
Han, G.W.10
Kobayashi, T.11
Stevens, R.C.12
Iwata, S.13
-
26
-
-
0024473209
-
Expression of histamine h1 receptors on cultured histiocytic lymphoma cells
-
Driver AG, Kukoly CA, Bennett TE: Expression of histamine H1 receptors on cultured histiocytic lymphoma cells. Biochem Pharmacol 1989, 38(18):3083-3091.
-
(1989)
Biochem Pharmacol
, vol.38
, Issue.18
, pp. 3083-3091
-
-
Driver, A.G.1
Kukoly, C.A.2
Bennett, T.E.3
-
27
-
-
84890301042
-
Ticks and tick-borne pathogens at the cutaneous interface: Host defenses, tick countermeasures, and a suitable environment for pathogen establishment
-
Wikel S: Ticks and tick-borne pathogens at the cutaneous interface: host defenses, tick countermeasures, and a suitable environment for pathogen establishment. Front Microbiol 2013, 4:337.
-
(2013)
Front Microbiol
, vol.4
, pp. 337
-
-
Wikel, S.1
-
28
-
-
34247123987
-
A tick protein with a modified kunitz fold inhibits human tryptase
-
Paesen GC, Siebold C, Harlos K, Peacey MF, Nuttall PA, Stuart DI: A tick protein with a modified kunitz fold inhibits human Tryptase. J Mol Biol 2007, 368(4):1172-1186.
-
(2007)
J Mol Biol
, vol.368
, Issue.4
, pp. 1172-1186
-
-
Paesen, G.C.1
Siebold, C.2
Harlos, K.3
Peacey, M.F.4
Nuttall, P.A.5
Stuart, D.I.6
-
29
-
-
0004151015
-
-
New York, NY (USA): Oxford University Press
-
Sonenshine DE, Roe RM: Biology of Ticks, Volume 2. New York, NY (USA): Oxford University Press; 2013.
-
(2013)
Biology of Ticks
, vol.2
-
-
Sonenshine, D.E.1
Roe, R.M.2
-
30
-
-
0021330778
-
Platelets in the synovial fluid of patients with rheumatoid arthritis
-
Farr M, Wainwright A, Salmon M, Hollywell CA, Bacon PA: Platelets in the synovial fluid of patients with rheumatoid arthritis. Rheumatol Int 1984, 4(1):13-17.
-
(1984)
Rheumatol Int
, vol.4
, Issue.1
, pp. 13-17
-
-
Farr, M.1
Wainwright, A.2
Salmon, M.3
Hollywell, C.A.4
Bacon, P.A.5
-
31
-
-
0036786466
-
High-throughput approaches to study salivary proteins and genes from vectors of disease
-
Valenzuela JG: High-throughput approaches to study salivary proteins and genes from vectors of disease. Insect Biochem Mol Biol 2002, 32(10):1199-1209.
-
(2002)
Insect Biochem Mol Biol
, vol.32
, Issue.10
, pp. 1199-1209
-
-
Valenzuela, J.G.1
-
32
-
-
63849338943
-
The role of saliva in tick feeding
-
Francischetti IMB, Sá-Nunes A, Mans BJ, Santos IM, Ribeiro JMC: The role of saliva in tick feeding. Front Biosci 2010, 14:2051-2088.
-
(2010)
Front Biosci
, vol.14
, pp. 2051-2088
-
-
Francischetti, I.M.B.1
Sá-Nunes, A.2
Mans, B.J.3
Santos, I.M.4
Ribeiro, J.M.C.5
|