-
1
-
-
84861456058
-
Production of acetone-butanol-ethanol from spoilage date palm (Phoenix dactylifera L.) fruits by mixed culture of Clostridium acetobutylicum and Bacillus subtilis
-
Abd-Alla, M.H. and Elsadek El-Enany, A.W. (2012) Production of acetone-butanol-ethanol from spoilage date palm (Phoenix dactylifera L.) fruits by mixed culture of Clostridium acetobutylicum and Bacillus subtilis. Biomass Bioenergy 42, 172-178.
-
(2012)
Biomass Bioenergy
, vol.42
, pp. 172-178
-
-
Abd-Alla, M.H.1
Elsadek El-Enany, A.W.2
-
2
-
-
0025183708
-
Basic local alignment search tool
-
Altschul, S.F., Gish, W., Miller, W., Myers, E.W. and Lipman, D.J. (1990) Basic local alignment search tool. J Mol Biol 215, 403-410.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
3
-
-
84865779683
-
Regulation of the histidine utilization (hut) system in bacteria
-
Bender, R.A. (2012) Regulation of the histidine utilization (hut) system in bacteria. Microbiol Mol Biol Rev 76, 565-584.
-
(2012)
Microbiol Mol Biol Rev
, vol.76
, pp. 565-584
-
-
Bender, R.A.1
-
4
-
-
64149097786
-
The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments
-
Bustin, S.A., Benes, V., Garson, J.A., Hellemans, J., Huggett, J., Kubista, M., Mueller, R., Nolan, T. et al. (2009) The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments. Clin Chem 55, 611-622.
-
(2009)
Clin Chem
, vol.55
, pp. 611-622
-
-
Bustin, S.A.1
Benes, V.2
Garson, J.A.3
Hellemans, J.4
Huggett, J.5
Kubista, M.6
Mueller, R.7
Nolan, T.8
-
5
-
-
0035075387
-
Revisiting the stringent response, ppGpp and starvation signaling
-
Chatterji, D. and Ojha, A.K. (2001) Revisiting the stringent response, ppGpp and starvation signaling. Curr Opin Microbiol 4, 160-165.
-
(2001)
Curr Opin Microbiol
, vol.4
, pp. 160-165
-
-
Chatterji, D.1
Ojha, A.K.2
-
6
-
-
0035678686
-
Nitrogen-fixation genes and nitrogenase activity in Clostridium acetobutylicum and Clostridium beijerinckii
-
Chen, J., Toth, J. and Kasap, M. (2001) Nitrogen-fixation genes and nitrogenase activity in Clostridium acetobutylicum and Clostridium beijerinckii. J Ind Microbiol Biotechnol 27, 281-286.
-
(2001)
J Ind Microbiol Biotechnol
, vol.27
, pp. 281-286
-
-
Chen, J.1
Toth, J.2
Kasap, M.3
-
7
-
-
0141789637
-
Surviving the acid test: responses of Gram-positive bacteria to low pH
-
Cotter, P.D. and Hill, C. (2003) Surviving the acid test: responses of Gram-positive bacteria to low pH. Microbiol Mol Biol Rev 67, 429-453.
-
(2003)
Microbiol Mol Biol Rev
, vol.67
, pp. 429-453
-
-
Cotter, P.D.1
Hill, C.2
-
8
-
-
0014801315
-
Purification and general properties of glutamate decarboxylase from Clostridium perfringens
-
Cozzani, I., Misuri, A. and Santoni, C. (1970) Purification and general properties of glutamate decarboxylase from Clostridium perfringens. Biochem J 118, 135-141.
-
(1970)
Biochem J
, vol.118
, pp. 135-141
-
-
Cozzani, I.1
Misuri, A.2
Santoni, C.3
-
9
-
-
42649128257
-
Fermentation of dried distillers' grains and solubles (DDGS) hydrolysates to solvents and value-added products by solventogenic clostridia
-
Ezeji, T. and Blaschek, H.P. (2008) Fermentation of dried distillers' grains and solubles (DDGS) hydrolysates to solvents and value-added products by solventogenic clostridia. Bioresour Technol 99, 5232-5242.
-
(2008)
Bioresour Technol
, vol.99
, pp. 5232-5242
-
-
Ezeji, T.1
Blaschek, H.P.2
-
10
-
-
79958010538
-
Fermentative production of butanol-the industrial perspective
-
Green, E.M. (2011) Fermentative production of butanol-the industrial perspective. Curr Opin Biotechnol 22, 337-343.
-
(2011)
Curr Opin Biotechnol
, vol.22
, pp. 337-343
-
-
Green, E.M.1
-
11
-
-
79960080446
-
Meta-analysis and functional validation of nutritional requirements of solventogenic clostridia growing under butanol stress conditions and coutilization of D-glucose and D-xylose
-
Heluane, H., Evans, M.R., Dagher, S.F. and Bruno-Barcena, J.M. (2011) Meta-analysis and functional validation of nutritional requirements of solventogenic clostridia growing under butanol stress conditions and coutilization of D-glucose and D-xylose. Appl Environ Microbiol 77, 4473-4485.
-
(2011)
Appl Environ Microbiol
, vol.77
, pp. 4473-4485
-
-
Heluane, H.1
Evans, M.R.2
Dagher, S.F.3
Bruno-Barcena, J.M.4
-
12
-
-
0029933664
-
A glutamate-dependent acid resistance gene in Escherichia coli
-
Hersh, B.M., Farooq, F.T., Barstad, D.N., Blankenhorn, D.L. and Slonczewski, J.L. (1996) A glutamate-dependent acid resistance gene in Escherichia coli. J Bacteriol 178, 3978-3981.
-
(1996)
J Bacteriol
, vol.178
, pp. 3978-3981
-
-
Hersh, B.M.1
Farooq, F.T.2
Barstad, D.N.3
Blankenhorn, D.L.4
Slonczewski, J.L.5
-
13
-
-
0003535096
-
-
4th edn. Blacksburg: Virginia Polytechnic Institute and State University.
-
Holdeman, L.V.E., Cato, E.P. and Moore, W.E.C. (1977) Anaerobe Laboratory Manual, 4th edn. pp. 15-16. Blacksburg: Virginia Polytechnic Institute and State University.
-
(1977)
Anaerobe Laboratory Manual
, pp. 15-16
-
-
Holdeman, L.V.E.1
Cato, E.P.2
Moore, W.E.C.3
-
14
-
-
77955559194
-
A proteomic and transcriptional view of acidogenic and solventogenic steady-state cells of Clostridium acetobutylicum in a chemostat culture
-
Janssen, H., Doring, C., Ehrenreich, A., Voigt, B., Hecker, M., Bahl, H. and Fischer, R.J. (2010) A proteomic and transcriptional view of acidogenic and solventogenic steady-state cells of Clostridium acetobutylicum in a chemostat culture. Appl Microbiol Biotechnol 87, 2209-2226.
-
(2010)
Appl Microbiol Biotechnol
, vol.87
, pp. 2209-2226
-
-
Janssen, H.1
Doring, C.2
Ehrenreich, A.3
Voigt, B.4
Hecker, M.5
Bahl, H.6
Fischer, R.J.7
-
15
-
-
84865423798
-
A transcriptional study of acidogenic chemostat cells of Clostridium acetobutylicum - solvent stress caused by a transient n-butanol pulse
-
Janssen, H., Grimmler, C., Ehrenreich, A., Bahl, H. and Fischer, R.J. (2012) A transcriptional study of acidogenic chemostat cells of Clostridium acetobutylicum - solvent stress caused by a transient n-butanol pulse. J Biotechnol 161, 354-365.
-
(2012)
J Biotechnol
, vol.161
, pp. 354-365
-
-
Janssen, H.1
Grimmler, C.2
Ehrenreich, A.3
Bahl, H.4
Fischer, R.J.5
-
16
-
-
0022970603
-
Acetone-butanol fermentation revisited
-
Jones, D.T. and Woods, D.R. (1986) Acetone-butanol fermentation revisited. Microbiol Rev 50, 484-524.
-
(1986)
Microbiol Rev
, vol.50
, pp. 484-524
-
-
Jones, D.T.1
Woods, D.R.2
-
17
-
-
34249071422
-
Anaerobic biotechnological approaches for production of liquid energy carriers from biomass
-
Karakashev, D., Thomsen, A.B. and Angelidaki, I. (2007) Anaerobic biotechnological approaches for production of liquid energy carriers from biomass. Biotechnol Lett 29, 1005-1012.
-
(2007)
Biotechnol Lett
, vol.29
, pp. 1005-1012
-
-
Karakashev, D.1
Thomsen, A.B.2
Angelidaki, I.3
-
18
-
-
0021140524
-
Initiation of solvent production, clostridial stage and endospore formation in Clostridium acetobutylicum P262
-
Long, S., Jones, D.T. and Woods, D.R. (1984) Initiation of solvent production, clostridial stage and endospore formation in Clostridium acetobutylicum P262. Appl Environ Microbiol 20, 256-261.
-
(1984)
Appl Environ Microbiol
, vol.20
, pp. 256-261
-
-
Long, S.1
Jones, D.T.2
Woods, D.R.3
-
19
-
-
84877122812
-
L-glutamine provides acid resistance for Escherichia coli through enzymatic release of ammonia
-
Lu, P., Ma, D., Chen, Y., Guo, Y., Chen, G.-Q., Deng, H. and Shi, Y. (2013) L-glutamine provides acid resistance for Escherichia coli through enzymatic release of ammonia. Cell Res 23, 635-644.
-
(2013)
Cell Res
, vol.23
, pp. 635-644
-
-
Lu, P.1
Ma, D.2
Chen, Y.3
Guo, Y.4
Chen, G.-Q.5
Deng, H.6
Shi, Y.7
-
20
-
-
0034003164
-
The cause of "acid-crash" and "acidogenic fermentations" during the batch acetone-butanol-ethanol (ABE-) fermentation process
-
Maddox, I.S., Steiner, E., Hirsch, S., Wessner, S., Gutierrez, N.A., Gapes, J.R. and Schuster, K.C. (2000) The cause of "acid-crash" and "acidogenic fermentations" during the batch acetone-butanol-ethanol (ABE-) fermentation process. J Mol Microbiol Biotechnol 2, 95-100.
-
(2000)
J Mol Microbiol Biotechnol
, vol.2
, pp. 95-100
-
-
Maddox, I.S.1
Steiner, E.2
Hirsch, S.3
Wessner, S.4
Gutierrez, N.A.5
Gapes, J.R.6
Schuster, K.C.7
-
21
-
-
17644419266
-
Sequencing, characterization and transcriptional analysis of the histidine decarboxylase operon of Lactobacillus buchneri
-
Martin, M.C., Fernandez, M., Linares, D.M. and Alvarez, M.A. (2005) Sequencing, characterization and transcriptional analysis of the histidine decarboxylase operon of Lactobacillus buchneri. Microbiology 151, 1219-1228.
-
(2005)
Microbiology
, vol.151
, pp. 1219-1228
-
-
Martin, M.C.1
Fernandez, M.2
Linares, D.M.3
Alvarez, M.A.4
-
22
-
-
0027191082
-
Generation of a proton motive force by histidine decarboxylation and electrogenic histidine histamine antiport in Lactobacillus buchneri
-
Molenaar, D., Bosscher, J.S., Ten Brink, B., Driessen, A.J. and Konings, W.N. (1993) Generation of a proton motive force by histidine decarboxylation and electrogenic histidine histamine antiport in Lactobacillus buchneri. J Bacteriol 175, 2864-2870.
-
(1993)
J Bacteriol
, vol.175
, pp. 2864-2870
-
-
Molenaar, D.1
Bosscher, J.S.2
Ten Brink, B.3
Driessen, A.J.4
Konings, W.N.5
-
23
-
-
0032981370
-
Lactococcus lactis contains only one glutamate decarboxylase gene
-
Nomura, M., Nakajima, I., Fujita, Y., Kobayashi, M., Kimoto, H., Suzuki, I. and Aso, H. (1999) Lactococcus lactis contains only one glutamate decarboxylase gene. Microbiology 145, 1375-1380.
-
(1999)
Microbiology
, vol.145
, pp. 1375-1380
-
-
Nomura, M.1
Nakajima, I.2
Fujita, Y.3
Kobayashi, M.4
Kimoto, H.5
Suzuki, I.6
Aso, H.7
-
24
-
-
0015155688
-
Oxygen and the growth and metabolism of Clostridium acetobutylicum
-
O'Brien, R.W. and Morris, J.G. (1971) Oxygen and the growth and metabolism of Clostridium acetobutylicum. J Gen Microbiol 68, 307-318.
-
(1971)
J Gen Microbiol
, vol.68
, pp. 307-318
-
-
O'Brien, R.W.1
Morris, J.G.2
-
25
-
-
0032955787
-
Butanol production by hypersolvent-producing mutant Clostridium beijerinckii BA101 in corn steep water medium containing maltodextrin
-
Parekh, M. and Blaschek, H.P. (1999) Butanol production by hypersolvent-producing mutant Clostridium beijerinckii BA101 in corn steep water medium containing maltodextrin. Biotechnol Lett 21, 45-48.
-
(1999)
Biotechnol Lett
, vol.21
, pp. 45-48
-
-
Parekh, M.1
Blaschek, H.P.2
-
26
-
-
17344392308
-
A new mathematical model for relative quantification in real-time RT-PCR
-
Pfaffl, M.W. (2001) A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res 29, 2002-2007.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 2002-2007
-
-
Pfaffl, M.W.1
-
27
-
-
0025190927
-
Cloning, sequencing, expression, and site-directed mutagenesis of the gene from Clostridium perfringens encoding pyruvoyl-dependent histidine decarboxylase
-
van Poelje, P.D. and Snell, E.E. (1990) Cloning, sequencing, expression, and site-directed mutagenesis of the gene from Clostridium perfringens encoding pyruvoyl-dependent histidine decarboxylase. Biochemistry 29, 132-139.
-
(1990)
Biochemistry
, vol.29
, pp. 132-139
-
-
van Poelje, P.D.1
Snell, E.E.2
-
28
-
-
84962855354
-
Nitrogen assimilation in Clostridia
-
In ed. Durre, Boca Raton, Florida, USA: CRC Press, Taylor and Francis.
-
Reid, S.J. and Stutz, H.E. (2005) Nitrogen assimilation in Clostridia. In Handbook on Clostridia ed. Durre, P. pp. 240-250. Boca Raton, Florida, USA: CRC Press, Taylor and Francis.
-
(2005)
Handbook on Clostridia
, pp. 240-250
-
-
Reid, S.J.1
Stutz, H.E.2
-
29
-
-
84857444687
-
Prolonged conversion of n-butyrate to n-butanol with Clostridium saccharoperbutylacetonicum in a two-stage continuous culture with in-situ product removal
-
Richter, H., Qureshi, N., Heger, S., Dien, B., Cotta, M.A. and Angenent, L.T. (2012) Prolonged conversion of n-butyrate to n-butanol with Clostridium saccharoperbutylacetonicum in a two-stage continuous culture with in-situ product removal. Biotechnol Bioeng 109, 913-921.
-
(2012)
Biotechnol Bioeng
, vol.109
, pp. 913-921
-
-
Richter, H.1
Qureshi, N.2
Heger, S.3
Dien, B.4
Cotta, M.A.5
Angenent, L.T.6
-
30
-
-
0031984335
-
A chloride-inducible acid resistance mechanism in Lactococcus lactis and its regulation
-
Sanders, J.W., Leenhouts, K., Burghoorn, J., Brands, J.R., Venema, G. and Kok, J. (1998) A chloride-inducible acid resistance mechanism in Lactococcus lactis and its regulation. Mol Microbiol 27, 299-310.
-
(1998)
Mol Microbiol
, vol.27
, pp. 299-310
-
-
Sanders, J.W.1
Leenhouts, K.2
Burghoorn, J.3
Brands, J.R.4
Venema, G.5
Kok, J.6
-
31
-
-
17444404231
-
Expression of abrB310 and SinR, and effects of decreased abrB310 expression on the transition from acidogenesis to solventogenesis, in Clostridium acetobutylicum ATCC 824
-
Scotcher, M.C., Rudolph, F.B. and Bennett, G.N. (2005) Expression of abrB310 and SinR, and effects of decreased abrB310 expression on the transition from acidogenesis to solventogenesis, in Clostridium acetobutylicum ATCC 824. Appl Environ Microbiol 71, 1987-1995.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 1987-1995
-
-
Scotcher, M.C.1
Rudolph, F.B.2
Bennett, G.N.3
-
32
-
-
0036160325
-
ANTAR: an RNA-binding domain in transcription antitermination regulatory proteins
-
Shu, C.J. and Zhulin, I.B. (2002) ANTAR: an RNA-binding domain in transcription antitermination regulatory proteins. Trends Biochem Sci 27, 3-5.
-
(2002)
Trends Biochem Sci
, vol.27
, pp. 3-5
-
-
Shu, C.J.1
Zhulin, I.B.2
-
33
-
-
34948821807
-
Co-regulation of the nitrogen-assimilatory gene cluster in Clostridium saccharobutylicum
-
Stutz, H.E., Quixley, K.W., Mcmaster, L.D. and Reid, S.J. (2007) Co-regulation of the nitrogen-assimilatory gene cluster in Clostridium saccharobutylicum. Microbiology 153, 3081-3090.
-
(2007)
Microbiology
, vol.153
, pp. 3081-3090
-
-
Stutz, H.E.1
Quixley, K.W.2
Mcmaster, L.D.3
Reid, S.J.4
-
34
-
-
0022460261
-
Cloning, expression, and purification of glutamine synthetase from Clostridium acetobutylicum
-
Usdin, K.P., Zappe, H., Jones, D.T. and Woods, D.R. (1986) Cloning, expression, and purification of glutamine synthetase from Clostridium acetobutylicum. Appl Environ Microbiol 52, 413-419.
-
(1986)
Appl Environ Microbiol
, vol.52
, pp. 413-419
-
-
Usdin, K.P.1
Zappe, H.2
Jones, D.T.3
Woods, D.R.4
-
35
-
-
84867729815
-
Clostridium thermocellum ATCC27405 transcriptomic, metabolomic and proteomic profiles after ethanol stress
-
Yang, S., Giannone, R.J., Dice, L., Yang, Z.K., Engle, N.L., Tschaplinski, T.J., Hettich, R.L. and Brown, S.D. (2012) Clostridium thermocellum ATCC27405 transcriptomic, metabolomic and proteomic profiles after ethanol stress. BMC Genom 13, 336.
-
(2012)
BMC Genom
, vol.13
, pp. 336
-
-
Yang, S.1
Giannone, R.J.2
Dice, L.3
Yang, Z.K.4
Engle, N.L.5
Tschaplinski, T.J.6
Hettich, R.L.7
Brown, S.D.8
-
36
-
-
84885948674
-
A comparison of three pH control methods for revealing effects of undissociated butyric acid on specific butanol production rate in batch fermentation of Clostridium acetobutylicum
-
Yang, X., Tu, M., Xie, R., Adhikari, S. and Tong, Z. (2013) A comparison of three pH control methods for revealing effects of undissociated butyric acid on specific butanol production rate in batch fermentation of Clostridium acetobutylicum. AMB Express 3, 1-8.
-
(2013)
AMB Express
, vol.3
, pp. 1-8
-
-
Yang, X.1
Tu, M.2
Xie, R.3
Adhikari, S.4
Tong, Z.5
|