Indica rice genome assembly, annotation and mining of blast disease resistance genes

BMC Genomics

Volumn 17, Issue 1, 2016, Pages

  Mahesh, H B ^a,b,d   Shirke, Meghana Deepak ^a,e   Singh, Siddarth ^c   Rajamani, Anantharamanan ^a   Hittalmani, Shailaja ^b   Wang, Guo Liang ^d   Gowda, Malali ^a,f  

^a TATA INSTITUTE OF FUNDAMENTAL RESEARCH   (India)

^b UNIVERSITY OF AGRICULTURAL SCIENCES   (India)

^c Pacific Biosciences   (Singapore)

^d OHIO STATE UNIVERSITY   (United States)

^e MANIPAL UNIVERSITY   (India)

^f Trans Disciplinary University (TDU)   (India)

Author keywords

Blast resistance; Genome sequencing; Illumina; Indica; O. sativa; Pacific Biosciences; SNPs; SSRs

Indexed keywords

VEGETABLE PROTEIN; MICROSATELLITE DNA; PLANT DNA;

ARTICLE; COMPARATIVE STUDY; CONTROLLED STUDY; CULTIVAR; FUNGAL PLANT DISEASE; FUNGAL STRAIN; FUNGUS ISOLATION; GENE MUTATION; GENE SEQUENCE; GENETIC VARIABILITY; GENOTYPE; INDIA; INDICA RICE; JAPONICA RICE; LRR GENE; NB ARC GENE; NONHUMAN; PI TA GENE; PI54 GENE; PK GENE; PLANT BREEDING; PLANT DEFENSE; PLANT GENE; PLANT GENOME; RICE; DISEASE RESISTANCE; DNA SEQUENCING; GENETICS; HIGH THROUGHPUT SEQUENCING; INDEL MUTATION; ORYZA; PLANT DISEASE; SINGLE NUCLEOTIDE POLYMORPHISM;

DISEASE RESISTANCE; DNA, PLANT; GENOME, PLANT; GENOTYPE; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; INDEL MUTATION; MICROSATELLITE REPEATS; ORYZA; PLANT DISEASES; POLYMORPHISM, SINGLE NUCLEOTIDE; SEQUENCE ANALYSIS, DNA;

EID: 84961182921     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/s12864-016-2523-7     Document Type: Article

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