Optogenetics: Turning the Microscope on Its Head

Biophysical Journal

Volumn 110, Issue 5, 2016, Pages 997-1003

  Cohen, Adam E ^a  

^a HARVARD UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

PHOTOPROTEIN; RHODOPSIN;

ANIMAL; CELLS; DEVICES; HUMAN; METABOLISM; MICROSCOPY; OPTOGENETICS; REPORTER GENE;

ANIMALS; CELLS; GENES, REPORTER; HUMANS; LUMINESCENT PROTEINS; MICROSCOPY; OPTOGENETICS; RHODOPSIN;

EID: 84961171608     PISSN: 00063495     EISSN: 15420086     Source Type: Journal    
DOI: 10.1016/j.bpj.2016.02.011     Document Type: Review

References (27)

1. D.F. Feng, G. Cho, and R.F. Doolittle Determining divergence times with a protein clock: update and reevaluation Proc. Natl. Acad. Sci. USA 94 1997 13028 13033
2. K. Deisseroth, and G. Feng M.J. Schnitzer Next-generation optical technologies for illuminating genetically targeted brain circuits J. Neurosci. 26 2006 10380 10386
3. M. Chalfie, and Y. Tu D.C. Prasher Green fluorescent protein as a marker for gene expression Science 263 1994 802 805
4. R.N. Day, and M.W. Davidson The fluorescent protein palette: tools for cellular imaging Chem. Soc. Rev. 38 2009 2887 2921
5. K.D. Piatkevich, F.V. Subach, and V.V. Verkhusha Engineering of bacterial phytochromes for near-infrared imaging, sensing, and light-control in mammals Chem. Soc. Rev. 42 2013 3441 3452
6. D.M. Shcherbakova, and V.V. Verkhusha Near-infrared fluorescent proteins for multicolor in vivo imaging Nat. Methods 10 2013 751 754
7. D. Cai, and K.B. Cohen J.R. Sanes Improved tools for the Brainbow toolbox Nat. Methods 10 2013 540 547
8. E. Betzig, and G.H. Patterson H.F. Hess Imaging intracellular fluorescent proteins at nanometer resolution Science 313 2006 1642 1645
9. B.F. Fosque, and Y. Sun E.R. Schreiter Neural circuits. Labeling of active neural circuits in vivo with designed calcium integrators Science 347 2015 755 760
10. J.S. Marvin, and B.G. Borghuis L.L. Looger An optimized fluorescent probe for visualizing glutamate neurotransmission Nat. Methods 10 2013 162 170
11. F. St-Pierre, M. Chavarha, and M.Z. Lin Designs and sensing mechanisms of genetically encoded fluorescent voltage indicators Curr. Opin. Chem. Biol. 27 2015 31 38
12. C. Jurchenko, and K.S. Salaita Lighting Up the Force: Investigating Mechanisms of Mechanotransduction Using Fluorescent Tension Probes Mol. Cell. Biol. 35 2015 2570 2582
13. E.S. Boyden A history of optogenetics: the development of tools for controlling brain circuits with light F1000 Biol. Rep. 3 2011 11
14. L. Fenno, O. Yizhar, and K. Deisseroth The development and application of optogenetics Annu. Rev. Neurosci. 34 2011 389 412
15. Z. Wu, and A.E. Autry C.G. Dulac Galanin neurons in the medial preoptic area govern parental behaviour Nature 509 2014 325 330
16. J.M. Kralj, and D.R. Hochbaum A.E. Cohen Electrical spiking in Escherichia coli probed with a fluorescent voltage-indicating protein Science 333 2011 345 348
17. J.M. Kralj, and A.D. Douglass A.E. Cohen Optical recording of action potentials in mammalian neurons using a microbial rhodopsin Nat. Methods 9 2012 90 95
18. D.R. Hochbaum, and Y. Zhao A.E. Cohen All-optical electrophysiology in mammalian neurons using engineered microbial rhodopsins Nat. Methods 11 2014 825 833
19. X.X. Zhou, M. Pan, and M.Z. Lin Investigating neuronal function with optically controllable proteins Front. Mol. Neurosci. 8 2015 37
20. P. van Bergeijk, and M. Adrian L.C. Kapitein Optogenetic control of organelle transport and positioning Nature 518 2015 111 114
21. S. Konermann, and M.D. Brigham F. Zhang Optical control of mammalian endogenous transcription and epigenetic states Nature 500 2013 472 476
22. Y. Nihongaki, and F. Kawano M. Sato Photoactivatable CRISPR-Cas9 for optogenetic genome editing Nat. Biotechnol. 33 2015 755 760
23. N. Vladimirov, and Y. Mu M.B. Ahrens Light-sheet functional imaging in fictively behaving zebrafish Nat. Methods 11 2014 883 884
24. D. Lin, and M.P. Boyle D.J. Anderson Functional identification of an aggression locus in the mouse hypothalamus Nature 470 2011 221 226
25. D.R. Hochbaum, and Y. Zhao A.E. Cohen All-optical electrophysiology in mammalian neurons using engineered microbial rhodopsins Nat. Methods 11 2014 825 833
26. P. van Bergeijk, M. Adrian, C.C. Hoogenraad, and L.C. Kapitein Optogenetic control of organelle transport and positioning Nature 518 2015 111 114
27. Y. Nihongaki, F. Kuwano, T. Nakajima, and M. Sato Photoactivatable CRISPR-Cas9 for optogenetic genome editing Nat. Biotechnol. 33 2015 755 760