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Volumn 10, Issue 2, 2016, Pages

Mitochondrial Genome Sequence of the Scabies Mite Provides Insight into the Genetic Diversity of Individual Scabies Infections

Author keywords

[No Author keywords available]

Indexed keywords

ADULT; ANIMAL EXPERIMENT; ANIMAL MODEL; ARTICLE; CASE REPORT; GENE FREQUENCY; GENE SEQUENCE; GENETIC DIFFERENCE; GENETIC POLYMORPHISM; GENETIC VARIABILITY; HAPLOTYPE; HUMAN; METAGENOMICS; MITE; MITOCHONDRIAL GENOME; MOLECULAR GENETICS; NONHUMAN; OPEN READING FRAME; PIG; SARCOPTES SCABIEI; SCABIES; SINGLE NUCLEOTIDE POLYMORPHISM; STAPHYLOCOCCUS AUREUS; ANIMAL; AUSTRALIA; CHEMISTRY; CLASSIFICATION; DNA SEQUENCE; GENETIC VARIATION; GENETICS; PARASITOLOGY; SWINE DISEASE; VETERINARY;

EID: 84959492796     PISSN: 19352727     EISSN: 19352735     Source Type: Journal    
DOI: 10.1371/journal.pntd.0004384     Document Type: Article
Times cited : (33)

References (61)
  • 2
    • 77954028818 scopus 로고    scopus 로고
    • Parasitic diseases of remote Indigenous communities in Australia
    • 20412810, .;():–
    • Holt DC, McCarthy JS, Carapetis JR, Parasitic diseases of remote Indigenous communities in Australia. International journal for parasitology. 2010;40(10):1119–26. doi: 10.1016/j.ijpara.2010.04.00220412810.
    • (2010) International journal for parasitology , vol.40 , Issue.10 , pp. 1119-1126
    • Holt, D.C.1    McCarthy, J.S.2    Carapetis, J.R.3
  • 3
    • 18844444543 scopus 로고    scopus 로고
    • Crusted scabies: clinical and immunological findings in seventy-eight patients and a review of the literature
    • 15907543, .;():–
    • Roberts LJ, Huffam SE, Walton SF, Currie BJ, Crusted scabies: clinical and immunological findings in seventy-eight patients and a review of the literature. The Journal of infection. 2005;50(5):375–81. doi: 10.1016/j.jinf.2004.08.03315907543.
    • (2005) The Journal of infection , vol.50 , Issue.5 , pp. 375-381
    • Roberts, L.J.1    Huffam, S.E.2    Walton, S.F.3    Currie, B.J.4
  • 4
    • 0033874467 scopus 로고    scopus 로고
    • Skin infections and infestations in Aboriginal communities in northern Australia
    • 10954983, .;():–
    • Currie BJ, Carapetis JR, Skin infections and infestations in Aboriginal communities in northern Australia. Australasian journal of dermatology. 2000;41(3):139–43. 10954983
    • (2000) Australasian journal of dermatology , vol.41 , Issue.3 , pp. 139-143
    • Currie, B.J.1    Carapetis, J.R.2
  • 5
    • 84874940294 scopus 로고    scopus 로고
    • Novel insights into an old disease: recent developments in scabies mite biology
    • 23385639, .;():–
    • Holt DC, Fischer K, Novel insights into an old disease: recent developments in scabies mite biology. Current opinion in infectious diseases. 2013;26(2):110–5. doi: 10.1097/QCO.0b013e32835eb98623385639.
    • (2013) Current opinion in infectious diseases , vol.26 , Issue.2 , pp. 110-115
    • Holt, D.C.1    Fischer, K.2
  • 7
    • 85015553610 scopus 로고    scopus 로고
    • Samuel W, Pybus M, Kocan A, Parasitic Diseases of Wild MammalsIowa State University Press. Ames, IA. 2001.
    • (2001)
    • Samuel, W.1    Pybus, M.2    Kocan, A.3
  • 8
    • 42049105341 scopus 로고    scopus 로고
    • Disease burden and health-care clinic attendances for young children in remote aboriginal communities of northern Australia
    • 18438516, .;():–. Epub 2008/04/29. S0042-96862008000400012 [pii].; PubMed Central PMCID: PMC2647416
    • Clucas DB, Carville KS, Connors C, Currie BJ, Carapetis JR, Andrews RM, Disease burden and health-care clinic attendances for young children in remote aboriginal communities of northern Australia. Bull World Health Organ. 2008;86(4):275–81. Epub 2008/04/29. S0042-96862008000400012 [pii]. 18438516; PubMed Central PMCID: PMC2647416.
    • (2008) Bull World Health Organ , vol.86 , Issue.4 , pp. 275-281
    • Clucas, D.B.1    Carville, K.S.2    Connors, C.3    Currie, B.J.4    Carapetis, J.R.5    Andrews, R.M.6
  • 10
    • 0016281904 scopus 로고
    • Skin infections in eastern Panama. Survey of two representative communities
    • 4451236, .;():–
    • Allen AM, Taplin D, Skin infections in eastern Panama. Survey of two representative communities. The American journal of tropical medicine and hygiene. 1974;23(5):950–6. 4451236
    • (1974) The American journal of tropical medicine and hygiene , vol.23 , Issue.5 , pp. 950-956
    • Allen, A.M.1    Taplin, D.2
  • 11
    • 0015028654 scopus 로고
    • Streptococcal Ecthyma: Treatment With Benzathine Pencillin G
    • 5548277, .;():–
    • Kelly C, Taplin D, Allen AM, Streptococcal Ecthyma: Treatment With Benzathine Pencillin G. Archives of dermatology. 1971;103(3):306–10. 5548277
    • (1971) Archives of dermatology , vol.103 , Issue.3 , pp. 306-310
    • Kelly, C.1    Taplin, D.2    Allen, A.M.3
  • 12
    • 84916889681 scopus 로고    scopus 로고
    • Short-course oral co-trimoxazole versus intramuscular benzathine benzylpenicillin for impetigo in a highly endemic region: an open-label, randomised, controlled, non-inferiority trial
    • ..;():–
    • Bowen AC, Tong SY, Andrews RM, O'Meara IM, McDonald MI, Chatfield MD, et al. Short-course oral co-trimoxazole versus intramuscular benzathine benzylpenicillin for impetigo in a highly endemic region: an open-label, randomised, controlled, non-inferiority trial. The Lancet. 2014;384(9960):2132–40.
    • (2014) The Lancet , vol.384 , Issue.9960 , pp. 2132-2140
    • Bowen, A.C.1    Tong, S.Y.2    Andrews, R.M.3    O'Meara, I.M.4    McDonald, M.I.5    Chatfield, M.D.6
  • 13
    • 22244461834 scopus 로고    scopus 로고
    • Acute rheumatic fever
    • .;():–
    • Carapetis JR, McDonald M, Wilson NJ, Acute rheumatic fever. The Lancet. 2005;366(9480):155–68. doi: 10.1016/s0140-6736(05)66874-2
    • (2005) The Lancet , vol.366 , Issue.9480 , pp. 155-168
    • Carapetis, J.R.1    McDonald, M.2    Wilson, N.J.3
  • 14
    • 80053929432 scopus 로고    scopus 로고
    • Acute post-streptococcal glomerulonephritis in the Northern Territory of Australia: a review of 16 years data and comparison with the literature
    • 21976576, ..;():–
    • Marshall CS, Cheng AC, Markey PG, Towers RJ, Richardson LJ, Fagan PK, et al. Acute post-streptococcal glomerulonephritis in the Northern Territory of Australia: a review of 16 years data and comparison with the literature. The American journal of tropical medicine and hygiene. 2011;85(4):703–10. doi: 10.4269/ajtmh.2011.11-018521976576
    • (2011) The American journal of tropical medicine and hygiene , vol.85 , Issue.4 , pp. 703-710
    • Marshall, C.S.1    Cheng, A.C.2    Markey, P.G.3    Towers, R.J.4    Richardson, L.J.5    Fagan, P.K.6
  • 15
    • 0030045977 scopus 로고    scopus 로고
    • Acute rheumatic fever and rheumatic heart disease in the top end of Australia's Northern Territory
    • 8628132, .;():–
    • Carapetis JR, Wolff DR, Currie BJ, Acute rheumatic fever and rheumatic heart disease in the top end of Australia's Northern Territory. The Medical journal of Australia. 1996;164(3):146–9. 8628132
    • (1996) The Medical journal of Australia , vol.164 , Issue.3 , pp. 146-149
    • Carapetis, J.R.1    Wolff, D.R.2    Currie, B.J.3
  • 16
    • 84864632351 scopus 로고    scopus 로고
    • Complement inhibitors from scabies mites promote streptococcal growth–a novel mechanism in infected epidermis?
    • 22815998, .;():
    • Mika A, Reynolds SL, Pickering D, McMillan D, Sriprakash KS, Kemp DJ, et al. Complement inhibitors from scabies mites promote streptococcal growth–a novel mechanism in infected epidermis?PLoS neglected tropical diseases. 2012;6(7):e1563. doi: 10.1371/journal.pntd.000156322815998
    • (2012) PLoS neglected tropical diseases , vol.6 , Issue.7 , pp. e1563
    • Mika, A.1    Reynolds, S.L.2    Pickering, D.3    McMillan, D.4    Sriprakash, K.S.5    Kemp, D.J.6
  • 17
    • 80053441702 scopus 로고    scopus 로고
    • Scabies mite peritrophins are potential targets of human host innate immunity
    • 21980545, .;():.; PubMed Central PMCID: PMC3181238
    • Mika A, Goh P, Holt DC, Kemp DJ, Fischer K, Scabies mite peritrophins are potential targets of human host innate immunity. PLoS Negl Trop Dis. 2011;5(9):e1331. doi: 10.1371/journal.pntd.000133121980545; PubMed Central PMCID: PMC3181238.
    • (2011) PLoS Negl Trop Dis , vol.5 , Issue.9 , pp. e1331
    • Mika, A.1    Goh, P.2    Holt, D.C.3    Kemp, D.J.4    Fischer, K.5
  • 18
    • 0036445849 scopus 로고    scopus 로고
    • The neglected cousins: what do we know about the smaller arachnid orders
    • ?.;():–
    • Harvey MS, The neglected cousins: what do we know about the smaller arachnid orders? Journal of Arachnology. 2002;30(2):357–72.
    • (2002) Journal of Arachnology , vol.30 , Issue.2 , pp. 357-372
    • Harvey, M.S.1
  • 20
    • 0017817236 scopus 로고
    • Epidemiological problems of scabies
    • 415012, .;():–
    • Fain A, Epidemiological problems of scabies. International Journal of Dermatology. 1978;17(1):20–30. 415012
    • (1978) International Journal of Dermatology , vol.17 , Issue.1 , pp. 20-30
    • Fain, A.1
  • 22
    • 84925512326 scopus 로고    scopus 로고
    • Population identification of Sarcoptes hominis and Sarcoptes canis in China using DNA sequences
    • 25547078, ..;():–
    • Zhao Y, Cao Z, Cheng J, Hu L, Ma J, Yang Y, et al. Population identification of Sarcoptes hominis and Sarcoptes canis in China using DNA sequences. Parasitology research. 2015;114(3):1001–10. doi: 10.1007/s00436-014-4266-125547078
    • (2015) Parasitology research , vol.114 , Issue.3 , pp. 1001-1010
    • Zhao, Y.1    Cao, Z.2    Cheng, J.3    Hu, L.4    Ma, J.5    Yang, Y.6
  • 23
    • 58249085171 scopus 로고    scopus 로고
    • Is ITS-2 rDNA suitable marker for genetic characterization of Sarcoptes mites from different wild animals in different geographic areas?
    • 19019542, .;():–
    • Alasaad S, Soglia D, Spalenza V, Maione S, Soriguer RC, Pérez JM, et al. Is ITS-2 rDNA suitable marker for genetic characterization of Sarcoptes mites from different wild animals in different geographic areas?Veterinary parasitology. 2009;159(2):181–5. doi: 10.1016/j.vetpar.2008.10.00119019542
    • (2009) Veterinary parasitology , vol.159 , Issue.2 , pp. 181-185
    • Alasaad, S.1    Soglia, D.2    Spalenza, V.3    Maione, S.4    Soriguer, R.C.5    Pérez, J.M.6
  • 24
    • 0036020344 scopus 로고    scopus 로고
    • 'Amelio S, Rossi L. Ribosomal and mitochondrial DNA sequence variation in Sarcoptes mites from different hosts and geographical regions
    • .;():–
    • Berrilli F D, 'Amelio S, Rossi L. Ribosomal and mitochondrial DNA sequence variation in Sarcoptes mites from different hosts and geographical regions. Parasitology research. 2002;88(8):772–7.
    • (2002) Parasitology research , vol.88 , Issue.8 , pp. 772-777
    • Berrilli F, D.1
  • 25
    • 44949099429 scopus 로고    scopus 로고
    • A study on the genetic relationship of mites in the genus Sarcoptes (Acari: Sarcoptidae) in China
    • .;():–
    • Gu X-B, Yang G-Y, A study on the genetic relationship of mites in the genus Sarcoptes (Acari: Sarcoptidae) in China. International Journal of Acarology. 2008;34(2):183–90.
    • (2008) International Journal of Acarology , vol.34 , Issue.2 , pp. 183-190
    • Gu, X.-B.1    Yang, G.-Y.2
  • 26
    • 0032989029 scopus 로고    scopus 로고
    • Molecular analyses suggest monospecificity of the genus Sarcoptes (Acari: Sarcoptidae)
    • 10404272, .;():–
    • Zahler M, Essig A, Gothe R, Rinder H, Molecular analyses suggest monospecificity of the genus Sarcoptes (Acari: Sarcoptidae). International journal for parasitology. 1999;29(5):759–66. 10404272
    • (1999) International journal for parasitology , vol.29 , Issue.5 , pp. 759-766
    • Zahler, M.1    Essig, A.2    Gothe, R.3    Rinder, H.4
  • 27
    • 0032744219 scopus 로고    scopus 로고
    • Genetically distinct dog-derived and human-derived Sarcoptes scabiei in scabies-endemic communities in northern Australia
    • 10548286, ..;():–
    • Walton SF, Choy JL, Bonson A, Valle A, McBroom J, Taplin D, et al. Genetically distinct dog-derived and human-derived Sarcoptes scabiei in scabies-endemic communities in northern Australia. The American journal of tropical medicine and hygiene. 1999;61(4):542–7. 10548286
    • (1999) The American journal of tropical medicine and hygiene , vol.61 , Issue.4 , pp. 542-547
    • Walton, S.F.1    Choy, J.L.2    Bonson, A.3    Valle, A.4    McBroom, J.5    Taplin, D.6
  • 28
    • 0021256025 scopus 로고
    • Cross infestivity of Sarcoptes scabiei
    • 6736342, .;():–
    • Arlian LG, Runyan RA, Estes SA, Cross infestivity of Sarcoptes scabiei. J Am Acad Dermatol. 1984;10(6):979–86. 6736342.
    • (1984) J Am Acad Dermatol , vol.10 , Issue.6 , pp. 979-986
    • Arlian, L.G.1    Runyan, R.A.2    Estes, S.A.3
  • 29
    • 79960661102 scopus 로고    scopus 로고
    • Temporal stability in the genetic structure of Sarcoptes scabiei under the host-taxon law: empirical evidences from wildlife-derived Sarcoptes mite in Asturias, Spain
    • 21794141, ..;:.; PubMed Central PMCID: PMC3160406
    • Alasaad S, Oleaga A, Casais R, Rossi L, Min AM, Soriguer RC, et al. Temporal stability in the genetic structure of Sarcoptes scabiei under the host-taxon law: empirical evidences from wildlife-derived Sarcoptes mite in Asturias, Spain. Parasit Vectors. 2011;4:151. doi: 10.1186/1756-3305-4-15121794141; PubMed Central PMCID: PMC3160406.
    • (2011) Parasit Vectors , vol.4 , pp. 151
    • Alasaad, S.1    Oleaga, A.2    Casais, R.3    Rossi, L.4    Min, A.M.5    Soriguer, R.C.6
  • 30
    • 80053544658 scopus 로고    scopus 로고
    • The curse of the prey: Sarcoptes mite molecular analysis reveals potential prey-to-predator parasitic infestation in wild animals from Masai Mara, Kenya
    • 21978557, ..;:.; PubMed Central PMCID: PMC3193033
    • Gakuya F, Rossi L, Ombui J, Maingi N, Muchemi G, Ogara W, et al. The curse of the prey: Sarcoptes mite molecular analysis reveals potential prey-to-predator parasitic infestation in wild animals from Masai Mara, Kenya. Parasit Vectors. 2011;4:193. doi: 10.1186/1756-3305-4-19321978557; PubMed Central PMCID: PMC3193033.
    • (2011) Parasit Vectors , vol.4 , pp. 193
    • Gakuya, F.1    Rossi, L.2    Ombui, J.3    Maingi, N.4    Muchemi, G.5    Ogara, W.6
  • 31
    • 77957767275 scopus 로고    scopus 로고
    • A tractable experimental model for study of human and animal scabies
    • 20668508, ..;():.; PubMed Central PMCID: PMC2907415
    • Mounsey K, Ho MF, Kelly A, Willis C, Pasay C, Kemp DJ, et al. A tractable experimental model for study of human and animal scabies. PLoS Negl Trop Dis. 2010;4(7):e756. doi: 10.1371/journal.pntd.000075620668508; PubMed Central PMCID: PMC2907415.
    • (2010) PLoS Negl Trop Dis , vol.4 , Issue.7 , pp. e756
    • Mounsey, K.1    Ho, M.F.2    Kelly, A.3    Willis, C.4    Pasay, C.5    Kemp, D.J.6
  • 32
    • 34247194885 scopus 로고    scopus 로고
    • Experimental infection of Salmonella Enteritidis by the poultry red mite, Dermanyssus gallinae
    • 17382475, .;():–
    • Valiente Moro C, Chauve C, Zenner L, Experimental infection of Salmonella Enteritidis by the poultry red mite, Dermanyssus gallinae. Vet Parasitol. 2007;146(3–4):329–36. doi: 10.1016/j.vetpar.2007.02.02417382475.
    • (2007) Vet Parasitol , vol.146 , Issue.3-4 , pp. 329-336
    • Valiente Moro, C.1    Chauve, C.2    Zenner, L.3
  • 33
    • 0036637460 scopus 로고    scopus 로고
    • Phylogenetic analysis of bacterial communities associated with ectoparasitic chewing lice of pocket gophers: a culture-independent approach
    • 12019462, .;():–
    • Reed DL, Hafner MS, Phylogenetic analysis of bacterial communities associated with ectoparasitic chewing lice of pocket gophers: a culture-independent approach. Microb Ecol. 2002;44(1):78–93. doi: 10.1007/s00248-002-0009-412019462.
    • (2002) Microb Ecol , vol.44 , Issue.1 , pp. 78-93
    • Reed, D.L.1    Hafner, M.S.2
  • 34
    • 84959575529 scopus 로고    scopus 로고
    • FASTQC. Available from:
    • FASTQC. Available from: http://www.bioinformatics.babraham.ac.uk/projects/fastqc/.
  • 35
    • 84959489258 scopus 로고    scopus 로고
    • Trim Galore! Available from:
    • Trim Galore! Available from: http://www.bioinformatics.babraham.ac.uk/projects/trim_galore/.
  • 36
    • 43149115851 scopus 로고    scopus 로고
    • Velvet: algorithms for de novo short read assembly using de Bruijn graphs
    • 18349386, .;():–.; PubMed Central PMCID: PMC2336801
    • Zerbino DR, Birney E, Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome research. 2008;18(5):821–9. doi: 10.1101/gr.074492.10718349386; PubMed Central PMCID: PMC2336801.
    • (2008) Genome research , vol.18 , Issue.5 , pp. 821-829
    • Zerbino, D.R.1    Birney, E.2
  • 37
    • 69549135124 scopus 로고    scopus 로고
    • Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models
    • 19648916, .;():–.; PubMed Central PMCID: PMC2762791
    • Brady A, Salzberg SL, Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models. Nature methods. 2009;6(9):673–6. doi: 10.1038/nmeth.135819648916; PubMed Central PMCID: PMC2762791.
    • (2009) Nature methods , vol.6 , Issue.9 , pp. 673-676
    • Brady, A.1    Salzberg, S.L.2
  • 38
    • 81855212676 scopus 로고    scopus 로고
    • The genome of Tetranychus urticae reveals herbivorous pest adaptations
    • 22113690, ..;():–
    • Grbić M, Van Leeuwen T, Clark RM, Rombauts S, Rouzé P, Grbić V, et al. The genome of Tetranychus urticae reveals herbivorous pest adaptations. Nature. 2011;479(7374):487–92. doi: 10.1038/nature1064022113690
    • (2011) Nature , vol.479 , Issue.7374 , pp. 487-492
    • Grbić, M.1    Van Leeuwen, T.2    Clark, R.M.3    Rombauts, S.4    Rouzé, P.5    Grbić, V.6
  • 39
    • 84859210032 scopus 로고    scopus 로고
    • Fast gapped-read alignment with Bowtie 2
    • 22388286, .;():–.; PubMed Central PMCID: PMC3322381
    • Langmead B, Salzberg SL, Fast gapped-read alignment with Bowtie 2. Nature methods. 2012;9(4):357–9. doi: 10.1038/nmeth.192322388286; PubMed Central PMCID: PMC3322381.
    • (2012) Nature methods , vol.9 , Issue.4 , pp. 357-359
    • Langmead, B.1    Salzberg, S.L.2
  • 40
    • 65649120777 scopus 로고    scopus 로고
    • The complete mitochondrial genome of the house dust mite Dermatophagoides pteronyssinus (Trouessart): a novel gene arrangement among arthropods
    • 19284646, .;:. Epub 2009/03/17. 1471-2164-10-107 [pii]; PubMed Central PMCID: PMC2680895
    • Dermauw W, Van Leeuwen T, Vanholme B, Tirry L, The complete mitochondrial genome of the house dust mite Dermatophagoides pteronyssinus (Trouessart): a novel gene arrangement among arthropods. BMC genomics. 2009;10:107. Epub 2009/03/17. 1471-2164-10-107 [pii] doi: 10.1186/1471-2164-10-10719284646; PubMed Central PMCID: PMC2680895.
    • (2009) BMC genomics , vol.10 , pp. 107
    • Dermauw, W.1    Van Leeuwen, T.2    Vanholme, B.3    Tirry, L.4
  • 41
    • 77953826984 scopus 로고    scopus 로고
    • Improved pairwise alignment of genomic DNA
    • Harris RS. Improved pairwise alignment of genomic DNA. PhD thesis. 2007.
    • (2007)
    • Harris, R.S.1
  • 44
    • 0034201441 scopus 로고    scopus 로고
    • EMBOSS: the European molecular biology open software suite
    • 10827456, .;():–
    • Rice P, Longden I, Bleasby A, EMBOSS: the European molecular biology open software suite. Trends in genetics. 2000;16(6):276–7. 10827456
    • (2000) Trends in genetics , vol.16 , Issue.6 , pp. 276-277
    • Rice, P.1    Longden, I.2    Bleasby, A.3
  • 45
    • 84890037468 scopus 로고    scopus 로고
    • Infernal 1.1: 100-fold faster RNA homology searches
    • 24008419, .;():–.; PubMed Central PMCID: PMC3810854
    • Nawrocki EP, Eddy SR, Infernal 1.1: 100-fold faster RNA homology searches. Bioinformatics. 2013;29(22):2933–5. doi: 10.1093/bioinformatics/btt50924008419; PubMed Central PMCID: PMC3810854.
    • (2013) Bioinformatics , vol.29 , Issue.22 , pp. 2933-2935
    • Nawrocki, E.P.1    Eddy, S.R.2
  • 46
    • 65549111754 scopus 로고    scopus 로고
    • Infernal 1.0: inference of RNA alignments
    • 19307242, .;():–.; PubMed Central PMCID: PMC2732312
    • Nawrocki EP, Kolbe DL, Eddy SR, Infernal 1.0: inference of RNA alignments. Bioinformatics. 2009;25(10):1335–7. doi: 10.1093/bioinformatics/btp15719307242; PubMed Central PMCID: PMC2732312.
    • (2009) Bioinformatics , vol.25 , Issue.10 , pp. 1335-1337
    • Nawrocki, E.P.1    Kolbe, D.L.2    Eddy, S.R.3
  • 47
    • 80054078476 scopus 로고    scopus 로고
    • Fast, scalable generation of high-quality protein multiple sequence alignments using
    • 21988835, .;:.; PubMed Central PMCID: PMC3261699
    • Sievers F, Wilm A, Dineen D, Gibson TJ, Karplus K, Li W, et al. Fast, scalable generation of high-quality protein multiple sequence alignments usingClustal Omega. Molecular systems biology. 2011;7:539. doi: 10.1038/msb.2011.7521988835; PubMed Central PMCID: PMC3261699.
    • (2011) Clustal Omega. Molecular systems biology , vol.7 , pp. 539
    • Sievers, F.1    Wilm, A.2    Dineen, D.3    Gibson, T.J.4    Karplus, K.5    Li, W.6
  • 48
    • 68549104404 scopus 로고    scopus 로고
    • The Sequence Alignment/Map format and SAMtools
    • 19505943, ..;():–.; PubMed Central PMCID: PMC2723002
    • Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, et al. The Sequence Alignment/Map format and SAMtools. Bioinformatics. 2009;25(16):2078–9. doi: 10.1093/bioinformatics/btp35219505943; PubMed Central PMCID: PMC2723002.
    • (2009) Bioinformatics , vol.25 , Issue.16 , pp. 2078-2079
    • Li, H.1    Handsaker, B.2    Wysoker, A.3    Fennell, T.4    Ruan, J.5    Homer, N.6
  • 49
    • 84863229597 scopus 로고    scopus 로고
    • VarScan 2: somatic mutation and copy number alteration discovery in cancer by exome sequencing
    • 22300766, ..;():–.; PubMed Central PMCID: PMC3290792
    • Koboldt DC, Zhang Q, Larson DE, Shen D, McLellan MD, Lin L, et al. VarScan 2: somatic mutation and copy number alteration discovery in cancer by exome sequencing. Genome research. 2012;22(3):568–76. doi: 10.1101/gr.129684.11122300766; PubMed Central PMCID: PMC3290792.
    • (2012) Genome research , vol.22 , Issue.3 , pp. 568-576
    • Koboldt, D.C.1    Zhang, Q.2    Larson, D.E.3    Shen, D.4    McLellan, M.D.5    Lin, L.6
  • 50
    • 1842870035 scopus 로고    scopus 로고
    • The complete sequence of the mitochondrial genome of the honeybee ectoparasite mite Varroa destructor (Acari: Mesostigmata)
    • 12446822, .;():–
    • Navajas M, Le Conte Y, Solignac M, Cros-Arteil S, Cornuet J- M, The complete sequence of the mitochondrial genome of the honeybee ectoparasite mite Varroa destructor (Acari: Mesostigmata). Molecular biology and evolution. 2002;19(12):2313–7. 12446822
    • (2002) Molecular biology and evolution , vol.19 , Issue.12 , pp. 2313-2317
    • Navajas, M.1    Le Conte, Y.2    Solignac, M.3    Cros-Arteil, S.4    Cornuet J-, M.5
  • 51
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • 21546353, .;():–.; PubMed Central PMCID: PMC3203626
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S, MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular biology and evolution. 2011;28(10):2731–9. doi: 10.1093/molbev/msr12121546353; PubMed Central PMCID: PMC3203626.
    • (2011) Molecular biology and evolution , vol.28 , Issue.10 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 52
    • 84880527958 scopus 로고    scopus 로고
    • Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads—a baiting and iterative mapping approach
    • 23661685, .;():.; PubMed Central PMCID: PMC3711436
    • Hahn C, Bachmann L, Chevreux B, Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads—a baiting and iterative mapping approach. Nucleic acids research. 2013;41(13):e129. doi: 10.1093/nar/gkt37123661685; PubMed Central PMCID: PMC3711436.
    • (2013) Nucleic acids research , vol.41 , Issue.13 , pp. e129
    • Hahn, C.1    Bachmann, L.2    Chevreux, B.3
  • 53
    • 0032076536 scopus 로고    scopus 로고
    • Tomáška LUr, Fukuhara H, Suyama Y, Kováč L. Linear mitochondrial genomes: 30 years down the line
    • 9613202, .;():–
    • Nosek J, Tomáška LUr, Fukuhara H, Suyama Y, Kováč L. Linear mitochondrial genomes: 30 years down the line. Trends in Genetics. 1998;14(5):184–8. 9613202
    • (1998) Trends in Genetics , vol.14 , Issue.5 , pp. 184-188
    • Nosek, J.1
  • 55
    • 84904525002 scopus 로고    scopus 로고
    • The complete mitochondrial genome of the scab mite Psoroptes cuniculi (Arthropoda: Arachnida) provides insights into Acari phylogeny
    • .;():–
    • Gu X-B, Liu G-H, Song H-Q, Liu T-Y, Yang G-Y, Zhu X-Q, The complete mitochondrial genome of the scab mite Psoroptes cuniculi (Arthropoda: Arachnida) provides insights into Acari phylogeny. Parasites & vectors. 2014;7(1):1–10.
    • (2014) Parasites & vectors , vol.7 , Issue.1 , pp. 1-10
    • Gu, X.-B.1    Liu, G.-H.2    Song, H.-Q.3    Liu, T.-Y.4    Yang, G.-Y.5    Zhu, X.-Q.6
  • 56
    • 73449118930 scopus 로고    scopus 로고
    • Improved tRNA prediction in the American house dust mite reveals widespread occurrence of extremely short minimal tRNAs in acariform mites
    • 20003349, .;:.; PubMed Central PMCID: PMC2797822
    • Klimov PB, Oconnor BM, Improved tRNA prediction in the American house dust mite reveals widespread occurrence of extremely short minimal tRNAs in acariform mites. BMC genomics. 2009;10:598. doi: 10.1186/1471-2164-10-59820003349; PubMed Central PMCID: PMC2797822.
    • (2009) BMC genomics , vol.10 , pp. 598
    • Klimov, P.B.1    Oconnor, B.M.2
  • 57
    • 84876271959 scopus 로고    scopus 로고
    • Is permanent parasitism reversible?—Critical evidence from early evolution of house dust mites
    • .:syt008
    • Klimov PB, OConnor B, Is permanent parasitism reversible?—Critical evidence from early evolution of house dust mites. Systematic biology. 2013:syt008.
    • (2013) Systematic biology
    • Klimov, P.B.1    OConnor, B.2
  • 58
    • 0030756246 scopus 로고    scopus 로고
    • Mitochondrial gene arrangement of the horseshoe crab Limulus polyphemus L.: conservation of major features among arthropod classes
    • 9254925, .;():–
    • Staton JL, Daehler LL, Brown WM, Mitochondrial gene arrangement of the horseshoe crab Limulus polyphemus L.: conservation of major features among arthropod classes. Molecular biology and evolution. 1997;14(8):867–74. 9254925
    • (1997) Molecular biology and evolution , vol.14 , Issue.8 , pp. 867-874
    • Staton, J.L.1    Daehler, L.L.2    Brown, W.M.3
  • 59
    • 84859506329 scopus 로고    scopus 로고
    • A major genome region underlying artemisinin resistance in malaria
    • 22491853, ..;():–
    • Cheeseman IH, Miller BA, Nair S, Nkhoma S, Tan A, Tan JC, et al. A major genome region underlying artemisinin resistance in malaria. Science. 2012;336(6077):79–82. doi: 10.1126/science.121596622491853
    • (2012) Science , vol.336 , Issue.6077 , pp. 79-82
    • Cheeseman, I.H.1    Miller, B.A.2    Nair, S.3    Nkhoma, S.4    Tan, A.5    Tan, J.C.6
  • 60
    • 84862777661 scopus 로고    scopus 로고
    • Whole-genome sequence of Schistosoma haematobium
    • 22246508, ..;():–
    • Young ND, Jex AR, Li B, Liu S, Yang L, Xiong Z, et al. Whole-genome sequence of Schistosoma haematobium. Nature genetics. 2012;44(2):221–5. doi: 10.1038/ng.106522246508.
    • (2012) Nature genetics , vol.44 , Issue.2 , pp. 221-225
    • Young, N.D.1    Jex, A.R.2    Li, B.3    Liu, S.4    Yang, L.5    Xiong, Z.6
  • 61
    • 80053366291 scopus 로고    scopus 로고
    • Interactive metagenomic visualization in a Web browser
    • .;():
    • Ondov BD, Bergman NH, Phillippy AM, Interactive metagenomic visualization in a Web browser. BMC bioinformatics. 2011;12(1):385.
    • (2011) BMC bioinformatics , vol.12 , Issue.1 , pp. 385
    • Ondov, B.D.1    Bergman, N.H.2    Phillippy, A.M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.