-
1
-
-
0007265103
-
Lepidosiren paradoxa Anatomisch Untersucht und Beschrieben. (Leopold Voss 1840)
-
Bischoff, T. L. W. Lepidosiren paradoxa. Anatomisch untersucht und beschrieben. (Leopold Voss, 1840) Translation in Ana Sci Natur 14, 116-59 (1840).
-
(1840)
Translation in Ana Sci Natur
, vol.14
, pp. 116-159
-
-
Bischoff, T.L.W.1
-
2
-
-
11944270355
-
Complete mitochondrial genome sequences of the South American and the Australian lungfish: Testing of the phylogenetic performance of mitochondrial data sets for phylogenetic problems in tetrapod relationships
-
Brinkmann, H., Denk, A., Zitzler, J., Joss, J. J., & Meyer, A. Complete mitochondrial genome sequences of the South American and the Australian lungfish: testing of the phylogenetic performance of mitochondrial data sets for phylogenetic problems in tetrapod relationships. J Mol Evol 59, 834-48 (2004).
-
(2004)
J Mol Evol
, vol.59
, pp. 834-848
-
-
Brinkmann, H.1
Denk, A.2
Zitzler, J.3
Joss, J.J.4
Meyer, A.5
-
3
-
-
84876271982
-
The African coelacanth genome provides insights into tetrapod evolution
-
Amemiya, C. T., et al. The African coelacanth genome provides insights into tetrapod evolution. Nature 496, 311-6 (2013).
-
(2013)
Nature
, vol.496
, pp. 311-316
-
-
Amemiya, C.T.1
-
4
-
-
0003535927
-
-
Available at: Accessed: 1st December 2005
-
Gregory, T. R. Animal Genome Size Database. (2015) Available at: http://www.genomesize.com. (Accessed: 1st December 2005).
-
(2015)
Animal Genome Size Database.
-
-
Gregory, T.R.1
-
5
-
-
84920001686
-
Accommodating the load: The transposable element content of very large genomes
-
Metcalfe, C. J., & Casane, D. Accommodating the load: The transposable element content of very large genomes. Mob Genet Elements 3, e24775 (2013).
-
(2013)
Mob Genet Elements
, vol.3
, pp. e24775
-
-
Metcalfe, C.J.1
Casane, D.2
-
6
-
-
77952183473
-
Population-level transcriptome sequencing of nonmodel organisms Erynnispropertius and Papiliozelicaon
-
O?Neil, S. T., et al. Population-level transcriptome sequencing of nonmodel organisms Erynnispropertius and Papiliozelicaon. BMC Genomics 11, 310 (2010).
-
(2010)
BMC Genomics
, vol.11
, pp. 310
-
-
O'Neil, S.T.1
-
7
-
-
84881146903
-
Analysis of the transcriptome of the Indonesian coelacanth Latimeria menadoensis
-
Pallavicini, A., et al. Analysis of the transcriptome of the Indonesian coelacanth Latimeria menadoensis. BMC Genomics 14, 538 (2013).
-
(2013)
BMC Genomics
, vol.14
, pp. 538
-
-
Pallavicini, A.1
-
8
-
-
84155195077
-
Comparative expression analysis in mature gonads, liver and brain of turbot (Scophthalmus maximus) by cDNAAFLPS
-
Taboada, X., et al. Comparative expression analysis in mature gonads, liver and brain of turbot (Scophthalmus maximus) by cDNAAFLPS. Gene 492, 250-61 (2012).
-
(2012)
Gene
, vol.492
, pp. 250-261
-
-
Taboada, X.1
-
9
-
-
84872594090
-
Transcriptomic analyses of sexual dimorphism of the zebrafish liver and the effect of sex hormones
-
Zheng, W., et al. Transcriptomic analyses of sexual dimorphism of the zebrafish liver and the effect of sex hormones. PLoS One 8, e53562 (2013).
-
(2013)
PLoS One
, vol.8
, pp. e53562
-
-
Zheng, W.1
-
10
-
-
84959396826
-
Origins of the higher groups of tetrapods: Controversy and consensus
-
Schultze, H. P., & Trueb, L. Origins of the Higher Groups of Tetrapods: Controversy and Consensus. (Comstock Publishing Associates, 1991).
-
(1991)
Comstock Publishing Associates
-
-
Schultze, H.P.1
Trueb, L.2
-
11
-
-
0027453388
-
Simple methods for testing the molecular evolutionary clock hypothesis
-
Tajima, F. Simple methods for testing the molecular evolutionary clock hypothesis. Genetics 135, 599-607 (1993).
-
(1993)
Genetics
, vol.135
, pp. 599-607
-
-
Tajima, F.1
-
12
-
-
0038842034
-
Uber die chemische beschaffenheit der sog hornfaden von mustelus und uber die zusammensetzung der keratinosen hullen um die eier von scyllium stellate
-
Krukenberg, C. Uber die chemische Beschaffenheit der sog. hornfaden von Mustelus und uber die Zusammensetzung der keratinosen Hullen um die Eier von Scyllium stellate. Mittheilungen Zool Stat Neapel 6, 286-96 (1885).
-
(1885)
Mittheilungen Zool Stat Neapel
, vol.6
, pp. 286-296
-
-
Krukenberg, C.1
-
13
-
-
77954540386
-
Loss of fish actinotrichia proteins and the fin-To-limb transition
-
Zhang, J., et al. Loss of fish actinotrichia proteins and the fin-To-limb transition. Nature 466, 234-37 (2010).
-
(2010)
Nature
, vol.466
, pp. 234-237
-
-
Zhang, J.1
-
14
-
-
0020046461
-
Comparative fine structure of the Osteichthyan dermotrichia
-
Geraudie, J., & Meunier, F. J. Comparative fine structure of the Osteichthyan dermotrichia. Anat Rec 202, 325-8 (1982).
-
(1982)
Anat Rec
, vol.202
, pp. 325-328
-
-
Geraudie, J.1
Meunier, F.J.2
-
15
-
-
0021298231
-
Structure and comparative morphology of camptotrichia of lungfish fins
-
Geraudie, J., & Meunier, F. J. Structure and comparative morphology of camptotrichia of lungfish fins. Tissue Cell 16, 217-36 (1984).
-
(1984)
Tissue Cell
, vol.16
, pp. 217-236
-
-
Geraudie, J.1
Meunier, F.J.2
-
16
-
-
69949121252
-
A gain of function mutation causing skeletal overgrowth in the rapunzel mutant
-
Green, J., Taylor, J. J., Hindes, A., Johnson, S. L., & Goldsmith, M. I. A gain of function mutation causing skeletal overgrowth in the rapunzel mutant. Dev Biol 334, 224-34 (2009).
-
(2009)
Dev Biol
, vol.334
, pp. 224-234
-
-
Green, J.1
Taylor, J.J.2
Hindes, A.3
Johnson, S.L.4
Goldsmith, M.I.5
-
17
-
-
84855474444
-
Behavioral evidence for the evolution of walking and bounding before terrestriality in sarcopterygian fishes
-
King, H. M., Shubin, N. H., Coates, M. I., & Hale, M. E. Behavioral evidence for the evolution of walking and bounding before terrestriality in sarcopterygian fishes. Proc Natl Acad Sci USA 108, 21146-51 (2011).
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 21146-21151
-
-
King, H.M.1
Shubin, N.H.2
Coates, M.I.3
Hale, M.E.4
-
18
-
-
80052048466
-
Comparative transcriptome analyses indicate molecular homology of zebrafish swimbladder and mammalian lung
-
Zheng, W., et al. Comparative transcriptome analyses indicate molecular homology of zebrafish swimbladder and mammalian lung. PLoS One 6, e24019 (2011).
-
(2011)
PLoS One
, vol.6
, pp. e24019
-
-
Zheng, W.1
-
19
-
-
0242301636
-
Surfactant protein profile of pulmonary surfactant in premature infants
-
Ballard, P. L., et al. Surfactant protein profile of pulmonary surfactant in premature infants. Am J Respir Crit Care Med 168, 1123-8 (2003).
-
(2003)
Am J Respir Crit Care Med
, vol.168
, pp. 1123-1128
-
-
Ballard, P.L.1
-
20
-
-
33644828798
-
Surfactant proteins SP-A and SP-D: Structure, function and receptors
-
Kishore, U., et al. Surfactant proteins SP-A and SP-D: structure, function and receptors. Mol Immunol 43, 1293-315 (2006).
-
(2006)
Mol Immunol
, vol.43
, pp. 1293-1315
-
-
Kishore, U.1
-
21
-
-
0031795751
-
Structure biologic properties, and expression of surfactant protein D (SP-D)
-
Crouch, E. C. Structure, biologic properties, and expression of surfactant protein D (SP-D). Biochim Biophys Acta 1408, 278-89 (1998).
-
(1998)
Biochim Biophys Acta
, vol.1408
, pp. 278-289
-
-
Crouch, E.C.1
-
22
-
-
84895145823
-
Excretory nitrogen metabolism and defence against ammonia toxicity in air-breathing fishes
-
Chew, S. F., & Ip, Y. K. Excretory nitrogen metabolism and defence against ammonia toxicity in air-breathing fishes. J Fish Biol 84, 603-38 (2014).
-
(2014)
J Fish Biol
, vol.84
, pp. 603-638
-
-
Chew, S.F.1
Ip, Y.K.2
-
23
-
-
84905561879
-
Characterization of purine catabolic pathway genes in coelacanths
-
Forconi, M., et al. Characterization of purine catabolic pathway genes in coelacanths. J Exp Zool B Mol Dev Evol 322, 334-41 (2014).
-
(2014)
J Exp Zool B Mol Dev Evol
, vol.322
, pp. 334-341
-
-
Forconi, M.1
-
24
-
-
62549126083
-
Ab initio construction of a eukaryotic transcriptome by massively parallel mRNA sequencing
-
Yassour, M., Kaplan, T., Fraser, H. B., et al. Ab initio construction of a eukaryotic transcriptome by massively parallel mRNA sequencing. Proc Natl Acad Sci USA 106, 3264-69 (2009).
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 3264-3269
-
-
Yassour, M.1
Kaplan, T.2
Fraser, H.B.3
-
26
-
-
0037036933
-
Cytogenetic and molecular studies in a lungfish
-
Morescalchi, M., Rocco, L., & Stingo, V. Cytogenetic and molecular studies in a lungfish, Protopterus annectens (Osteichthyes, Dipnoi). Gene 295, 279-87 (2002).
-
(2002)
Protopterus Annectens (Osteichthyes, Dipnoi). Gene
, vol.295
, pp. 279-287
-
-
Morescalchi, M.1
Rocco, L.2
Stingo, V.3
-
27
-
-
0346091244
-
Genome downsizing in polyploid plants
-
Leitch, I. J., & Bennett, M. D. Genome downsizing in polyploid plants. Biol J Linnean Soc 82, 651-63 (2004).
-
(2004)
Biol J Linnean Soc
, vol.82
, pp. 651-663
-
-
Leitch, I.J.1
Bennett, M.D.2
-
28
-
-
0038338886
-
Nonadditive changes in genome size during allopolyploidization in the wheat (Aegilops-Triticum) group
-
Ozkan, H., Tuna, M., & Arumuganathan, K. Nonadditive changes in genome size during allopolyploidization in the wheat (Aegilops-Triticum) group. J Hered 94, 260-64 (2003).
-
(2003)
J Hered
, vol.94
, pp. 260-264
-
-
Ozkan, H.1
Tuna, M.2
Arumuganathan, K.3
-
29
-
-
70349201094
-
Did genome duplication drive the origin of teleosts?. A comparative study of diversification in ray-finned fishes
-
Santini, F., Harmon, L. J., Carnevale, G., & Alfaro, M. E. Did genome duplication drive the origin of teleosts?. A comparative study of diversification in ray-finned fishes. BMC Evol Biol 9, 194 (2009).
-
(2009)
BMC Evol Biol
, vol.9
, pp. 194
-
-
Santini, F.1
Harmon, L.J.2
Carnevale, G.3
Alfaro, M.E.4
-
30
-
-
84949175314
-
-
eds Soltis, P. S., & Soltis, D. E.) Springer
-
Braasch, I., & Postlethwait, J. H. in Fish polyploidy and the teleost genome duplication. in Polyploidy and Genome Evolution. (eds Soltis, P. S., & Soltis, D. E.) 341-83 (Springer, 2012).
-
(2012)
Fish Polyploidy and the Teleost Genome Duplication. in Polyploidy and Genome Evolution.
, pp. 341-383
-
-
Braasch, I.1
Postlethwait, J.H.2
-
31
-
-
84908674397
-
T cell transcripts and T cell activities in the gills of the teleost fish sea bass (Dicentrarchus labrax)
-
Nunez Ortiz, N., et al. T cell transcripts and T cell activities in the gills of the teleost fish sea bass (Dicentrarchus labrax). Dev Comp Immunol 47, 309-18 (2014).
-
(2014)
Dev Comp Immunol
, vol.47
, pp. 309-318
-
-
Nunez Ortiz, N.1
-
32
-
-
84655169743
-
Comparative transcriptomics and gene expression in larval tiger salamander (Ambystoma tigrinum) gill and lung tissues as revealed by pyrosequencing
-
Eo, S. H., et al. Comparative transcriptomics and gene expression in larval tiger salamander (Ambystoma tigrinum) gill and lung tissues as revealed by pyrosequencing. Gene 492, 329-38 (2012).
-
(2012)
Gene
, vol.492
, pp. 329-338
-
-
Eo, S.H.1
-
33
-
-
84867761085
-
Evolution of the Australian lungfish (Neoceratodus forsteri) genome: A major role for CR1 and L2 LINE elements
-
Metcalfe, C. J., Filee, J., Germon, I., Joss, J., & Casane, D. Evolution of the Australian lungfish (Neoceratodus forsteri) genome: a major role for CR1 and L2 LINE elements. Mol Biol Evol 29, 3529-39 (2012).
-
(2012)
Mol Biol Evol
, vol.29
, pp. 3529-3539
-
-
Metcalfe, C.J.1
Filee, J.2
Germon, I.3
Joss, J.4
Casane, D.5
-
34
-
-
84865806641
-
LTR retrotransposons contribute to genomic gigantism in plethodontid salamanders
-
Sun, C., et al. LTR retrotransposons contribute to genomic gigantism in plethodontid salamanders. Genome Biol Evol 4, 168-83 (2012).
-
(2012)
Genome Biol Evol
, vol.4
, pp. 168-183
-
-
Sun, C.1
-
35
-
-
84905577477
-
Transcriptional activity of transposable elements in coelacanth
-
Forconi, M., et al. Transcriptional activity of transposable elements in coelacanth. J Exp Zool B Mol Dev Evol 322, 379-89 (2014).
-
(2014)
J Exp Zool B Mol Dev Evol
, vol.322
, pp. 379-389
-
-
Forconi, M.1
-
36
-
-
84858429240
-
Endogenous viruses: Insights into viral evolution and impact on host biology
-
Feschotte, C., & Gilbert, C. Endogenous viruses: insights into viral evolution and impact on host biology. Nat Rev Genet 13, 283-96 (2012).
-
(2012)
Nat Rev Genet
, vol.13
, pp. 283-296
-
-
Feschotte, C.1
Gilbert, C.2
-
37
-
-
33748867012
-
Phylogenomic analysis of the GIY-YIG nuclease superfamily
-
Dunin-Horkawicz, S., Feder, M., & Bujnicki, J. M. Phylogenomic analysis of the GIY-YIG nuclease superfamily. BMC Genomics 7, 98 (2006).
-
(2006)
BMC Genomics
, vol.7
, pp. 98
-
-
Dunin-Horkawicz, S.1
Feder, M.2
Bujnicki, J.M.3
-
38
-
-
3242743113
-
The phylogenetic relationship of tetrapod, coelacanth, and lungfish revealed by the sequences of forty-four nuclear genes
-
Takezaki, N., Figueroa, F., Zaleska-Rutczynska, Z., Takahata, N., & Klein, J. The phylogenetic relationship of tetrapod, coelacanth, and lungfish revealed by the sequences of forty-four nuclear genes. Mol Biol Evol 21, 1512-24 (2004).
-
(2004)
Mol Biol Evol
, vol.21
, pp. 1512-1524
-
-
Takezaki, N.1
Figueroa, F.2
Zaleska-Rutczynska, Z.3
Takahata, N.4
Klein, J.5
-
39
-
-
14144256126
-
Evolutionary history of African lungfish: A hypothesis from molecular phylogeny
-
Tokita, M., Okamoto, T., & Hikida, T. Evolutionary history of African lungfish: a hypothesis from molecular phylogeny. Mol Phylogenet Evol 35, 281-6 (2005).
-
(2005)
Mol Phylogenet Evol
, vol.35
, pp. 281-286
-
-
Tokita, M.1
Okamoto, T.2
Hikida, T.3
-
40
-
-
0025183708
-
Basic local alignment search tool
-
Altschul, S. F., Gish, W., Miller, W., Myers, E. W., & Lipman, D. J. Basic local alignment search tool. J Mol Biol 215, 403-10 (1990).
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
41
-
-
0029916924
-
The complete nucleotide sequence of the mitochondrial genome of the lungfish (Protopterus dolloi) supports its phylogenetic position as a close relative of land vertebrates
-
Zardoya, R., & Meyer, A. The complete nucleotide sequence of the mitochondrial genome of the lungfish (Protopterus dolloi) supports its phylogenetic position as a close relative of land vertebrates. Genetics 142, 1249-63 (1996).
-
(1996)
Genetics
, vol.142
, pp. 1249-1263
-
-
Zardoya, R.1
Meyer, A.2
-
42
-
-
33745634395
-
Cd-hit: A fast program for clustering and comparing large sets of protein or nucleotide sequences
-
Li, W., & Godzik, A. Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics 22, 1658-9 (2006).
-
(2006)
Bioinformatics
, vol.22
, pp. 1658-1659
-
-
Li, W.1
Godzik, A.2
-
43
-
-
84912125944
-
RNA sequencing and de novo assembly of the digestive gland transcriptome in Mytilus galloprovincialis fed with toxinogenic and non-Toxic strains of Alexandrium minutum
-
Gerdol, M., et al RNA sequencing and de novo assembly of the digestive gland transcriptome in Mytilus galloprovincialis fed with toxinogenic and non-Toxic strains of Alexandrium minutum. BMC Res Notes 7, 722 (2014).
-
(2014)
BMC Res Notes
, vol.7
, pp. 722
-
-
Gerdol, M.1
-
44
-
-
84872730174
-
Incomplete sex chromosome dosage compensation in the Indian meal moth Plodia interpunctella based on de novo transcriptome assembly
-
Harrison, P W., Mank, J. E., & Wedell, N. Incomplete Sex Chromosome Dosage Compensation in the Indian Meal Moth, Plodia Interpunctella, Based on de Novo Transcriptome Assembly. Genome Biol Evol 4, 1118-26 (2012).
-
(2012)
Genome Biol Evol
, vol.4
, pp. 1118-1126
-
-
Harrison, P.W.1
Mank, J.E.2
Wedell, N.3
-
45
-
-
0034069495
-
Gene ontology: Tool for the unification of biology. The Gene Ontology Consortium
-
Ashburner, M., et al. Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet 25, 25-9 (2000).
-
(2000)
Nat Genet
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
-
46
-
-
84891757311
-
EggNOG v4.0: Nested orthology inference across 3686 organisms
-
Powell, S., et al. eggNOG v4.0: nested orthology inference across 3686 organisms. Nucleic Acids Res 42, D231-9 (2014).
-
(2014)
Nucleic Acids Res
, vol.42
, pp. D231-D239
-
-
Powell, S.1
-
47
-
-
84899518211
-
InterProScan 5: Genome-scale protein function classification
-
Jones, P., et al. InterProScan 5: genome-scale protein function classification. Bioinformatics 30, 1236-40 (2014).
-
(2014)
Bioinformatics
, vol.30
, pp. 1236-1240
-
-
Jones, P.1
-
48
-
-
84872033704
-
Measurement of mRNA abundance using RNA-seq data: RPKM measure is inconsistent among samples
-
Wagner, G. P., Kin, K., & Lynch, V. J. Measurement of mRNA abundance using RNA-seq data: RPKM measure is inconsistent among samples. Theory Biosci 131, 281-5 (2012).
-
(2012)
Theory Biosci
, vol.131
, pp. 281-285
-
-
Wagner, G.P.1
Kin, K.2
Lynch, V.J.3
-
49
-
-
0043009767
-
Differential expression in SAGE: Accounting for normal between-library variation
-
Baggerly, K. A., Deng, L., Morris, J. S., & Aldaz, C. M. Differential expression in SAGE: accounting for normal between-library variation. Bioinforma Oxf Engl 19, 1477-83 (2003).
-
(2003)
Bioinforma Oxf Engl
, vol.19
, pp. 1477-1483
-
-
Baggerly, K.A.1
Deng, L.2
Morris, J.S.3
Aldaz, C.M.4
-
50
-
-
33745612095
-
Pvclust: An R package for assessing the uncertainty in hierarchical clustering
-
Suzuki, R., & Shimodaira, H. Pvclust: an R package for assessing the uncertainty in hierarchical clustering. Bioinformatics 22, 1540-2 (2006).
-
(2006)
Bioinformatics
, vol.22
, pp. 1540-1542
-
-
Suzuki, R.1
Shimodaira, H.2
-
51
-
-
84863304598
-
-
R Development Core Team. R Foundation for Statistical Computing Vienna Austria. ISBN 3-900051-07-0. Available at: Accessed: 12th October 2015
-
R Development Core Team. R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. (2008) ISBN 3-900051-07-0. Available at: http://www.R-project.org. (Accessed: 12th October 2015).
-
(2008)
R: A Language and Environment for Statistical Computing
-
-
-
53
-
-
29144455282
-
De novo identification of repeat families in large genomes
-
Price, A. L., Jones, N. C., & Pevzner, P. A. De novo identification of repeat families in large genomes. Bioinformatics 21, i351-8 (2005).
-
(2005)
Bioinformatics 21, i351-8
-
-
Price, A.L.1
Jones, N.C.2
Pevzner, P.A.3
-
54
-
-
84900396922
-
Transcriptomic analysis of endangered Chinese salamander: Identification of immune, sex and reproduction-related genes and genetic markers
-
Che, R., Sun, Y., Wang, R., & Xu, T. Transcriptomic analysis of endangered Chinese salamander: identification of immune, sex and reproduction-related genes and genetic markers. PloS One 9, e87940 (2014).
-
(2014)
PloS One
, vol.9
, pp. e87940
-
-
Che, R.1
Sun, Y.2
Wang, R.3
Xu, T.4
-
55
-
-
65549101705
-
TEclass-A tool for automated classification of unknown eukaryotic transposable elements
-
Abrusan, G., Grundmann, N., DeMester, L., & Makalowski, W. TEclass-A tool for automated classification of unknown eukaryotic transposable elements. Bioinforma Oxf Engl 25, 1329-30 (2009).
-
(2009)
Bioinforma Oxf Engl
, vol.25
, pp. 1329-1330
-
-
Abrusan, G.1
Grundmann, N.2
DeMester, L.3
Makalowski, W.4
-
56
-
-
84944463581
-
Character trees from transcriptome data: Origin and individuation of morphological characters and the so-called species signal
-
Musser, J. M., & Wagner, G. P. Character trees from transcriptome data: Origin and individuation of morphological characters and the so-called " species signal?. J Exp Zool Mol Dev Evol 999A, 1-17 (2015).
-
(2015)
J Exp Zool Mol Dev Evol 999A
, pp. 1-17
-
-
Musser, J.M.1
Wagner, G.P.2
-
57
-
-
84914689324
-
Predictable transcriptome evolution in the convergent and complex bioluminescent organs of squid
-
Pankey, M. S., et al. Predictable transcriptome evolution in the convergent and complex bioluminescent organs of squid. Proc Natl Acad Sci USA 111, E4736-42 (2014).
-
(2014)
Proc Natl Acad Sci USA
, vol.111
, pp. E4736-E4742
-
-
Pankey, M.S.1
-
58
-
-
0035861456
-
Bayesian inference of phylogeny and its impact on evolutionary biology
-
Huelsenbeck, J. P., Ronquist, F., Nielsen, R., & Bollback, J. P. Bayesian inference of phylogeny and its impact on evolutionary biology. Science 294, 2310-4 (2001).
-
(2001)
Science
, vol.294
, pp. 2310-2314
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
Nielsen, R.3
Bollback, J.P.4
-
59
-
-
84915747619
-
SkateBase, an elasmobranch genome project and collection of molecular resources for chondrichthyan fishes
-
Wyffels, J., et al. SkateBase, an elasmobranch genome project and collection of molecular resources for chondrichthyan fishes. F1000Res. 3, 191 (2014).
-
(2014)
F1000Res.
, vol.3
, pp. 191
-
-
Wyffels, J.1
-
60
-
-
3042666256
-
MUSCLE: Multiple sequence alignment with high accuracy and high throughput
-
Edgar, R. C. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32, 1792-7 (2004).
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
61
-
-
0034043778
-
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
-
Castresana, J. Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol Biol Evol 17, 540-52 (2000).
-
(2000)
Mol Biol Evol
, vol.17
, pp. 540-552
-
-
Castresana, J.1
-
62
-
-
79954529507
-
ProtTest 3: Fast selection of best-fit models of protein evolution
-
Darriba, D., Taboada, G. L., Doallo, R., & Posada, D. ProtTest 3: fast selection of best-fit models of protein evolution. Bioinformatics 27, 1164-65 (2011).
-
(2011)
Bioinformatics
, vol.27
, pp. 1164-1165
-
-
Darriba, D.1
Taboada, G.L.2
Doallo, R.3
Posada, D.4
-
63
-
-
34248669040
-
KaKs calculator: Calculating Ka and Ks through model selection and model averaging
-
Zhang, Z., et al. KaKs calculator: calculating Ka and Ks through model selection and model averaging. Geno Prot Bioinfo 4, 259-63 (2006).
-
(2006)
Geno Prot Bioinfo
, vol.4
, pp. 259-263
-
-
Zhang, Z.1
-
64
-
-
0028168856
-
A codon-based model of nucleotide substitution for protein-coding DNA sequences
-
Goldman, N., & Yang, Z. A codon-based model of nucleotide substitution for protein-coding DNA sequences. Mol Biol Evol 11, 725-36 (1994).
-
(1994)
Mol Biol Evol
, vol.11
, pp. 725-736
-
-
Goldman, N.1
Yang, Z.2
|