-
1
-
-
0022538606
-
Genetic evidence that Tn10 transposes by a nonreplicative mechanism
-
Bender J, Kleckner N. 1986. Genetic evidence that Tn10 transposes by a nonreplicative mechanism. Cell 45:801-815.
-
(1986)
Cell
, vol.45
, pp. 801-815
-
-
Bender, J.1
Kleckner, N.2
-
2
-
-
0024347101
-
A specific class of IS10 transposase mutants are blocked for target site interactions and promote formation of an excised transposon fragment
-
Haniford DB, Chelouche AR, Kleckner N. 1989. A specific class of IS10 transposase mutants are blocked for target site interactions and promote formation of an excised transposon fragment. Cell 59:385-394.
-
(1989)
Cell
, vol.59
, pp. 385-394
-
-
Haniford, D.B.1
Chelouche, A.R.2
Kleckner, N.3
-
6
-
-
0032577448
-
IHF modulation of Tn10 transposition: sensory transduction of supercoiling status via a proposed protein/DNA molecular spring
-
Chalmers R, Guhathakurta A, Benjamin H, Kleckner N. 1998. IHF modulation of Tn10 transposition: sensory transduction of supercoiling status via a proposed protein/DNA molecular spring. Cell 93:897-908.
-
(1998)
Cell
, vol.93
, pp. 897-908
-
-
Chalmers, R.1
Guhathakurta, A.2
Benjamin, H.3
Kleckner, N.4
-
7
-
-
0029143391
-
Identification and characterization of a pre-cleavage synaptic complex that is an early intermediate in Tn10 transposition
-
Sakai J, Chalmers RM, Kleckner N. 1995. Identification and characterization of a pre-cleavage synaptic complex that is an early intermediate in Tn10 transposition. EMBO J 14:4374-4383.
-
(1995)
EMBO J
, vol.14
, pp. 4374-4383
-
-
Sakai, J.1
Chalmers, R.M.2
Kleckner, N.3
-
8
-
-
0035898687
-
Protein-DNA contacts and conformational changes in the Tn10 transpososome during assembly and activation for cleavage
-
Crellin P, Chalmers R. 2001. Protein-DNA contacts and conformational changes in the Tn10 transpososome during assembly and activation for cleavage. EMBO J 20:3882-3891.
-
(2001)
EMBO J
, vol.20
, pp. 3882-3891
-
-
Crellin, P.1
Chalmers, R.2
-
9
-
-
1542345458
-
DNA looping and catalysis; the IHF-folded arm of Tn10 promotes conformational changes and hairpin resolution
-
Crellin P, Sewitz S, Chalmers R. 2004. DNA looping and catalysis; the IHF-folded arm of Tn10 promotes conformational changes and hairpin resolution. Mol Cell 13:537-547.
-
(2004)
Mol Cell
, vol.13
, pp. 537-547
-
-
Crellin, P.1
Sewitz, S.2
Chalmers, R.3
-
10
-
-
0024407545
-
Intramolecular transposition by Tn10
-
Benjamin HW, Kleckner N. 1989. Intramolecular transposition by Tn10. Cell 59:373-383.
-
(1989)
Cell
, vol.59
, pp. 373-383
-
-
Benjamin, H.W.1
Kleckner, N.2
-
11
-
-
0034616993
-
Threedimensional structure of the Tn5 synaptic complex transposition intermediate
-
Davies DR, Goryshin IY, Reznikoff WS, Rayment I. 2000. Threedimensional structure of the Tn5 synaptic complex transposition intermediate. Science 289:77-85.
-
(2000)
Science
, vol.289
, pp. 77-85
-
-
Davies, D.R.1
Goryshin, I.Y.2
Reznikoff, W.S.3
Rayment, I.4
-
12
-
-
59649104717
-
The global bacterial regulator H-NS promotes transpososome formation and transposition in the Tn5 system
-
Whitfield CR, Wardle SJ, Haniford DB. 2009. The global bacterial regulator H-NS promotes transpososome formation and transposition in the Tn5 system. Nucleic Acids Res 37:309-321.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 309-321
-
-
Whitfield, C.R.1
Wardle, S.J.2
Haniford, D.B.3
-
13
-
-
0022503256
-
Quantitation of insertion sequence IS10 transposase gene expression by a method generally applicable to any rarely expressed gene
-
Raleigh EA, Kleckner N. 1986. Quantitation of insertion sequence IS10 transposase gene expression by a method generally applicable to any rarely expressed gene. Proc Natl Acad Sci U S A 83:1787-1791.
-
(1986)
Proc Natl Acad Sci U S A
, vol.83
, pp. 1787-1791
-
-
Raleigh, E.A.1
Kleckner, N.2
-
15
-
-
0022400589
-
Tn10 protects itself at two levels from fortuitous activation by external promoters
-
Davis MA, Simons RW, Kleckner N. 1985. Tn10 protects itself at two levels from fortuitous activation by external promoters. Cell 43:379-387.
-
(1985)
Cell
, vol.43
, pp. 379-387
-
-
Davis, M.A.1
Simons, R.W.2
Kleckner, N.3
-
16
-
-
0020826922
-
Translational control of IS10 transposition
-
Simons RW, Kleckner N. 1983. Translational control of IS10 transposition. Cell 34:683-691.
-
(1983)
Cell
, vol.34
, pp. 683-691
-
-
Simons, R.W.1
Kleckner, N.2
-
17
-
-
0032946089
-
A mechanism forTn5 inhibition carboxyl-terminal dimerization
-
Mahnke Braam LA, Goryshin IY, Reznikoff WS. 1999. A mechanism forTn5 inhibition. carboxyl-terminal dimerization.JBiolChem274:86-92.
-
(1999)
JBiolChem
, vol.274
, pp. 86-92
-
-
Mahnke Braam, L.A.1
Goryshin, I.Y.2
Reznikoff, W.S.3
-
18
-
-
0022369785
-
IS10 transposition is regulated by DNA adenine methylation
-
Roberts D, Hoopes BC, McClure WR, Kleckner N. 1985. IS10 transposition is regulated by DNA adenine methylation. Cell 43:117-130.
-
(1985)
Cell
, vol.43
, pp. 117-130
-
-
Roberts, D.1
Hoopes, B.C.2
McClure, W.R.3
Kleckner, N.4
-
19
-
-
0024278075
-
Effect of dam methylation on Tn5 transposition
-
Yin JC, Krebs MP, Reznikoff WS. 1988. Effect of dam methylation on Tn5 transposition. J Mol Biol 199:35-45.
-
(1988)
J Mol Biol
, vol.199
, pp. 35-45
-
-
Yin, J.C.1
Krebs, M.P.2
Reznikoff, W.S.3
-
20
-
-
0029071840
-
Negative and positive regulation of Tn10/IS10-promoted recombination by IHF: two distinguishable processes inhibit transposition off of multicopy plasmid replicons and activate chromosomal events that favor evolution of new transposons
-
Signon L, Kleckner N. 1995. Negative and positive regulation of Tn10/IS10-promoted recombination by IHF: two distinguishable processes inhibit transposition off of multicopy plasmid replicons and activate chromosomal events that favor evolution of new transposons. Genes Dev 9:1123-1136.
-
(1995)
Genes Dev
, vol.9
, pp. 1123-1136
-
-
Signon, L.1
Kleckner, N.2
-
21
-
-
0025233643
-
Integration host factor plays a role in IS50 and Tn5 transposition
-
Makris JC, Nordmann PL, Reznikoff WS. 1990. Integration host factor plays a role in IS50 and Tn5 transposition. J Bacteriol 172:1368- 1373.
-
(1990)
J Bacteriol
, vol.172
, pp. 1368- 1373
-
-
Makris, J.C.1
Nordmann, P.L.2
Reznikoff, W.S.3
-
22
-
-
0026780094
-
Fis plays a role in Tn5 and IS50 transposition
-
Weinreich MD, Reznikoff WS. 1992. Fis plays a role in Tn5 and IS50 transposition. J Bacteriol 174:4530-4537.
-
(1992)
J Bacteriol
, vol.174
, pp. 4530-4537
-
-
Weinreich, M.D.1
Reznikoff, W.S.2
-
23
-
-
0026095756
-
LexA protein of Escherichia coli represses expression of the Tn5 transposase gene
-
Kuan CT, Tessman I. 1991. LexA protein of Escherichia coli represses expression of the Tn5 transposase gene. J Bacteriol 173:6406-6410.
-
(1991)
J Bacteriol
, vol.173
, pp. 6406-6410
-
-
Kuan, C.T.1
Tessman, I.2
-
24
-
-
33750848802
-
Transpososome dynamics and regulation in Tn10 transposition
-
Haniford DB. 2006. Transpososome dynamics and regulation in Tn10 transposition. Crit Rev Biochem Mol Biol 41:407-424.
-
(2006)
Crit Rev Biochem Mol Biol
, vol.41
, pp. 407-424
-
-
Haniford, D.B.1
-
25
-
-
58549097483
-
Transposon Tn5
-
Reznikoff WS. 2008. Transposon Tn5. Ann Rev Genet 42:269-286.
-
(2008)
Ann Rev Genet
, vol.42
, pp. 269-286
-
-
Reznikoff, WS.1
-
26
-
-
2442560235
-
H-NS: a universal regulator for a dynamic genome
-
Dorman CJ. 2004. H-NS: a universal regulator for a dynamic genome. Nat Rev Microbiol 2:391-400.
-
(2004)
Nat Rev Microbiol
, vol.2
, pp. 391-400
-
-
Dorman, C.J.1
-
27
-
-
79960433506
-
Hfq and its constellation of RNA
-
Vogel, J, Luisi BF. 2011. Hfq and its constellation of RNA. Nat Rev Microbiol 9:578-589.
-
(2011)
Nat Rev Microbiol
, vol.9
, pp. 578-589
-
-
Vogel, J.1
Luisi, B.F.2
-
28
-
-
21144436287
-
Genetic evidence that GTP is required for transposition of IS903 and Tn552 in Escherichia coli
-
Coros AM, Twiss E, Tavakoli NP, Derbyshire KM. 2005. Genetic evidence that GTP is required for transposition of IS903 and Tn552 in Escherichia coli. J Bacteriol 187:4598-4606.
-
(2005)
J Bacteriol
, vol.187
, pp. 4598-4606
-
-
Coros, A.M.1
Twiss, E.2
Tavakoli, N.P.3
Derbyshire, K.M.4
-
29
-
-
34250724903
-
Silencing of xenogeneic DNA by H-NS-facilitation of lateral gene transfer in bacteria by a defense system that recognizes foreign DNA
-
Navarre WW, McClelland M, Libby SJ, Fang FC. 2007. Silencing of xenogeneic DNA by H-NS-facilitation of lateral gene transfer in bacteria by a defense system that recognizes foreign DNA. Genes Dev 21:1456- 1471.
-
(2007)
Genes Dev
, vol.21
, pp. 1456- 1471
-
-
Navarre, W.W.1
McClelland, M.2
Libby, S.J.3
Fang, F.C.4
-
30
-
-
3142695073
-
The effect of host-encoded nucleoid proteins on transposition: H-NS influences targeting of both IS903 and Tn10
-
Swingle B, O'Carroll M, Haniford D, Derbyshire KM. 2004. The effect of host-encoded nucleoid proteins on transposition: H-NS influences targeting of both IS903 and Tn10. Molec Microbiol 52:1055-1067.
-
(2004)
Molec Microbiol
, vol.52
, pp. 1055-1067
-
-
Swingle, B.1
O'Carroll, M.2
Haniford, D.3
Derbyshire, K.M.4
-
31
-
-
24944534787
-
The global regulator H-NS acts directly on the transpososome to promote Tn10 transposition
-
Wardle SJ, O'Carroll M, Derbyshire KM, Haniford DB. 2005. The global regulator H-NS acts directly on the transpososome to promote Tn10 transposition. Genes Dev 19:2224-2235.
-
(2005)
Genes Dev
, vol.19
, pp. 2224-2235
-
-
Wardle, S.J.1
O'Carroll, M.2
Derbyshire, K.M.3
Haniford, D.B.4
-
32
-
-
0030976054
-
The oligomeric structure of nucleoid protein H-NS is necessary for recognition of intrinsically curved DNA and for DNA bending
-
Spurio R, Falconi M, Brandi A, Pon CL, Gualerzi CO. 1997. The oligomeric structure of nucleoid protein H-NS is necessary for recognition of intrinsically curved DNA and for DNA bending. EMBO J 16:1795- 1805.
-
(1997)
EMBO J
, vol.16
, pp. 1795- 1805
-
-
Spurio, R.1
Falconi, M.2
Brandi, A.3
Pon, C.L.4
Gualerzi, C.O.5
-
33
-
-
0036829677
-
The degree of oligomerization of the H-NS nucleoid structuring protein is related to specific binding to DNA
-
Badaut C, Williams R, Arluison V, Bouffartigues E, Robert B, Buc H, Rimsky S. 2002. The degree of oligomerization of the H-NS nucleoid structuring protein is related to specific binding to DNA. J Biol Chem 277:41657-41666.
-
(2002)
J Biol Chem
, vol.277
, pp. 41657-41666
-
-
Badaut, C.1
Williams, R.2
Arluison, V.3
Bouffartigues, E.4
Robert, B.5
Buc, H.6
Rimsky, S.7
-
34
-
-
34248329922
-
The global regulator H-NS binds to two distinct classes of sites within the Tn10 transpososome to promote transposition
-
Ward CM, Wardle SJ, Singh RK, Haniford DB. 2007. The global regulator H-NS binds to two distinct classes of sites within the Tn10 transpososome to promote transposition. Molec Microbiol 64:1000- 1013.
-
(2007)
Molec Microbiol
, vol.64
, pp. 1000-1013
-
-
Ward, C.M.1
Wardle, S.J.2
Singh, R.K.3
Haniford, D.B.4
-
35
-
-
80055097284
-
H-NS mediates the dissociation of a refractory protein-DNA complex during Tn10/IS10 transposition
-
Liu D, Haniford DB, Chalmers RM. 2011. H-NS mediates the dissociation of a refractory protein-DNA complex during Tn10/IS10 transposition. Nucleic Acids Res 39:6660-6668.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 6660-6668
-
-
Liu, D.1
Haniford, D.B.2
Chalmers, R.M.3
-
36
-
-
70350690564
-
H-NS binds with high affinity to the Tn10 transpososome and promotes transpososome stabilization
-
Wardle SJ, Chan A, Haniford DB. 2009. H-NS binds with high affinity to the Tn10 transpososome and promotes transpososome stabilization. Nucleic Acids Res 37:6148-6160.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 6148-6160
-
-
Wardle, S.J.1
Chan, A.2
Haniford, D.B.3
-
37
-
-
34247628510
-
HNS cooperative binding to high-affinity sites in a regulatory element results in transcriptional silencing
-
Bouffartigues E, Buckle M, Badaut C, Travers A, Rimsky S. 2007. HNS cooperative binding to high-affinity sites in a regulatory element results in transcriptional silencing. Nat Struct Molec Biol 14:441-448.
-
(2007)
Nat Struct Molec Biol
, vol.14
, pp. 441-448
-
-
Bouffartigues, E.1
Buckle, M.2
Badaut, C.3
Travers, A.4
Rimsky, S.5
-
38
-
-
17144371519
-
Cyclic changes in the affinity of protein-DNA interactions drive the progression and regulate the outcome of the Tn10 transposition reaction
-
Liu D, Crellin P, Chalmers R. 2005. Cyclic changes in the affinity of protein-DNA interactions drive the progression and regulate the outcome of the Tn10 transposition reaction. Nucleic Acids Res 33:1982-1992.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 1982-1992
-
-
Liu, D.1
Crellin, P.2
Chalmers, R.3
-
39
-
-
39049123030
-
The nucleoid binding protein H-NS acts as an anti-channeling factor to favor intermolecular Tn10 transposition and dissemination
-
Singh RK, Liburd J, Wardle SJ, Haniford DB. 2008. The nucleoid binding protein H-NS acts as an anti-channeling factor to favor intermolecular Tn10 transposition and dissemination. J Mol Biol 376:950-962.
-
(2008)
J Mol Biol
, vol.376
, pp. 950-962
-
-
Singh, R.K.1
Liburd, J.2
Wardle, S.J.3
Haniford, D.B.4
-
40
-
-
0032539631
-
A previously unidentified host protein protects retroviral DNA from autointegration
-
Lee MS, Craigie R. 1998. A previously unidentified host protein protects retroviral DNA from autointegration. Proc Natl Acad Sci U S A 95:1528-1533.
-
(1998)
Proc Natl Acad Sci U S A
, vol.95
, pp. 1528-1533
-
-
Lee, M.S.1
Craigie, R.2
-
41
-
-
0032433829
-
The barrier-to-autointegration protein is a host factor for HIV type 1 integration
-
Chen H, Engelman A. 1998. The barrier-to-autointegration protein is a host factor for HIV type 1 integration. Proc Natl Acad Sci U S A 95: 15270-15274.
-
(1998)
Proc Natl Acad Sci U S A
, vol.95
, pp. 15270-15274
-
-
Chen, H.1
Engelman, A.2
-
42
-
-
0030831193
-
DNA binding and phasing analyses of Tn5 transposase and a monomeric variant
-
York D, Reznikoff WS. 1997. DNA binding and phasing analyses of Tn5 transposase and a monomeric variant. Nucleic Acids Res 25:2153- 2160.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 2153-2160
-
-
York, D.1
Reznikoff, W.S.2
-
43
-
-
84866895752
-
Identification of basepairs within Tn5 termini that are critical for H-NS binding to the transpososome and regulation of Tn5 transposition
-
Whitfield CR, Shilton BH, Haniford DB. 2012. Identification of basepairs within Tn5 termini that are critical for H-NS binding to the transpososome and regulation of Tn5 transposition. Mob DNA 3:7.
-
(2012)
Mob DNA
, vol.3
, pp. 7
-
-
Whitfield, C.R.1
Shilton, B.H.2
Haniford, D.B.3
-
44
-
-
0034730125
-
A trans-acting RNA as a control switch in Escherichia coli: DsrA modulates function by forming alternative structures
-
Leae RA, Belfort M. 2000. A trans-acting RNA as a control switch in Escherichia coli: DsrA modulates function by forming alternative structures. Proc Natl Acad Sci U S A 97:9919-9924.
-
(2000)
Proc Natl Acad Sci U S A
, vol.97
, pp. 9919-9924
-
-
Leae, R.A.1
Belfort, M.2
-
45
-
-
77958594047
-
Tn10/IS10 transposition is downregulated at the level of transposase expression by the RNA-binding protein Hfq
-
Ross JA, Wardle SJ, Haniford DB. 2010. Tn10/IS10 transposition is downregulated at the level of transposase expression by the RNA-binding protein Hfq. Molec Microbiol 78:607-621.
-
(2010)
Molec Microbiol
, vol.78
, pp. 607-621
-
-
Ross, J.A.1
Wardle, S.J.2
Haniford, D.B.3
-
46
-
-
62849101179
-
Global systems-level analysis of Hfq and SmpB deletion mutants in Salmonella: implications for virulence and global protein translation
-
Ansong C, Yoon H, Porwollik S, Mottaz-Brewer H, Petritis BO, Jaitly N, Adkins JN, McClelland M, Heffron F, Smith RD. 2009. Global systems-level analysis of Hfq and SmpB deletion mutants in Salmonella: implications for virulence and global protein translation. PloSOne 4:e4809.
-
(2009)
PloSOne
, vol.4
, pp. e4809
-
-
Ansong, C.1
Yoon, H.2
Porwollik, S.3
Mottaz-Brewer, H.4
Petritis, B.O.5
Jaitly, N.6
Adkins, J.N.7
McClelland, M.8
Heffron, F.9
Smith, R.D.10
-
47
-
-
0025278320
-
The IS10 transposase mRNA is destabilized during antisense RNA control
-
Case CC, Simons EL, Simons RW. 1990. The IS10 transposase mRNA is destabilized during antisense RNA control. EMBO J 9:1259-1266.
-
(1990)
EMBO J
, vol.9
, pp. 1259-1266
-
-
Case, C.C.1
Simons, E.L.2
Simons, R.W.3
-
48
-
-
0024844260
-
Insertion sequence IS10 anti-sense pairing initiates by an interaction between the 5' end of the target RNA and a loop in the anti-sense RNA
-
Kittle JD, Simons RW, Lee J, Kleckner N. 1989. Insertion sequence IS10 anti-sense pairing initiates by an interaction between the 5' end of the target RNA and a loop in the anti-sense RNA. J Mol Biol 210:561-572.
-
(1989)
J Mol Biol
, vol.210
, pp. 561-572
-
-
Kittle, J.D.1
Simons, R.W.2
Lee, J.3
Kleckner, N.4
-
49
-
-
84876565196
-
Hfq restructures RNA-IN and RNA-OUT and facilitates antisense pairing in the Tn10/IS10 system
-
Ross JA, Ellis MJ, Hossain S, Haniford DB. 2013. Hfq restructures RNA-IN and RNA-OUT and facilitates antisense pairing in the Tn10/IS10 system. RNA 19:670-684.
-
(2013)
RNA
, vol.19
, pp. 670-684
-
-
Ross, J.A.1
Ellis, M.J.2
Hossain, S.3
Haniford, D.B.4
-
50
-
-
84885869888
-
Antagonistic functions between the RNA chaperone Hfq and an sRNA regulate sensitivity to the antibiotic colicin
-
Salvail H, Caron MP, Belanger J, Masse E. 2013. Antagonistic functions between the RNA chaperone Hfq and an sRNA regulate sensitivity to the antibiotic colicin. EMBO J 32:2764-2778.
-
(2013)
EMBO J
, vol.32
, pp. 2764-2778
-
-
Salvail, H.1
Caron, M.P.2
Belanger, J.3
Masse, E.4
-
51
-
-
84859365433
-
Noncanonical repression of translation initiation through small RNA recruitment of the RNA chaperone Hfq
-
Desnoyers G, Masse E. 2012. Noncanonical repression of translation initiation through small RNA recruitment of the RNA chaperone Hfq. Genes Dev 26:726-739.
-
(2012)
Genes Dev
, vol.26
, pp. 726-739
-
-
Desnoyers, G.1
Masse, E.2
-
52
-
-
0034194572
-
Hfq (HF1) stimulates ompA mRNA decay by interfering with ribosome binding
-
Vytvytska O, Moll I, Kaberdin VR, von Gabain A, Blasi U. 2000. Hfq (HF1) stimulates ompA mRNA decay by interfering with ribosome binding. Genes Dev 14:1109-1118.
-
(2000)
Genes Dev
, vol.14
, pp. 1109-1118
-
-
Vytvytska, O.1
Moll, I.2
Kaberdin, V.R.3
von Gabain, A.4
Blasi, U.5
-
53
-
-
1542320707
-
Hfq, a new chaperoning role: binding to messenger RNA determines access for small RNA regulator
-
Geissmann TA, Touati D. 2004. Hfq, a new chaperoning role: binding to messenger RNA determines access for small RNA regulator. EMBO J 23:396-405.
-
(2004)
EMBO J
, vol.23
, pp. 396-405
-
-
Geissmann, T.A.1
Touati, D.2
-
54
-
-
79960441320
-
Major role formRNAbinding and restructuring in sRNA recruitment by Hfq
-
Soper TJ,Doxzen K,Woodson SA. 2011.Major role formRNAbinding and restructuring in sRNA recruitment by Hfq. RNA 17:1544-1550.
-
(2011)
RNA
, vol.17
, pp. 1544-1550
-
-
Soper, T.J.1
Doxzen, K.2
Woodson, S.A.3
-
55
-
-
0024802862
-
The unusual stability of the IS10 anti-sense RNA is critical for its function and is determined by the structure of its stem-domain
-
Case CC, Roels SM, Jensen PD, Lee J, Kleckner N, Simons RW. 1989. The unusual stability of the IS10 anti-sense RNA is critical for its function and is determined by the structure of its stem-domain. EMBO J 8:4297-4305.
-
(1989)
EMBO J
, vol.8
, pp. 4297-4305
-
-
Case, C.C.1
Roels, S.M.2
Jensen, P.D.3
Lee, J.4
Kleckner, N.5
Simons, R.W.6
-
56
-
-
16544365115
-
Escherichia coli Hfq has distinct interaction surfaces for DsrA, rpoS and poly(A) RNAs
-
Mikulecky PJ, Kaw MK, Brescia CC, Takach JC, Sledjeski DD, Feig AL. 2004. Escherichia coli Hfq has distinct interaction surfaces for DsrA, rpoS and poly(A) RNAs. Nat Struct Molec Biol 11:1206-1214.
-
(2004)
Nat Struct Molec Biol
, vol.11
, pp. 1206-1214
-
-
Mikulecky, P.J.1
Kaw, M.K.2
Brescia, C.C.3
Takach, J.C.4
Sledjeski, D.D.5
Feig, A.L.6
-
57
-
-
80051962605
-
Structural basis for RNA 3'-end recognition by Hfq
-
Sauer E, Weichenrieder, O. 2011. Structural basis for RNA 3'-end recognition by Hfq. Proc Natl Acad Sci U S A 108:13065-13070.
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, pp. 13065-13070
-
-
Sauer, E.1
Weichenrieder, O.2
-
58
-
-
80053019485
-
Regulation by small RNAs in bacteria: expanding frontiers
-
Storz G, Vogel J, Wassarman KM. 2011. Regulation by small RNAs in bacteria: expanding frontiers. Molec Cell 43:880-891.
-
(2011)
Molec Cell
, vol.43
, pp. 880-891
-
-
Storz, G.1
Vogel, J.2
Wassarman, K.M.3
-
61
-
-
0034724557
-
Single active site catalysis of the successive phosphoryl transfer steps by DNA transposases: insights from phosphorothioate stereoselectivity
-
Kennedy AK, Haniford DB, Mizuuchi K. 2000. Single active site catalysis of the successive phosphoryl transfer steps by DNA transposases: insights from phosphorothioate stereoselectivity. Cell 101:295-305.
-
(2000)
Cell
, vol.101
, pp. 295-305
-
-
Kennedy, A.K.1
Haniford, D.B.2
Mizuuchi, K.3
-
62
-
-
11144245992
-
Transposition of hAT elements links transposable elements and V (D)J recombination
-
Zhou L, Mitra R, Atkinson PW, Hickman AB, Dyda F, Craig NL. 2004. Transposition of hAT elements links transposable elements and V (D)J recombination. Nature 432:995-1001.
-
(2004)
Nature
, vol.432
, pp. 995-1001
-
-
Zhou, L.1
Mitra, R.2
Atkinson, P.W.3
Hickman, A.B.4
Dyda, F.5
Craig, N.L.6
-
63
-
-
41949108098
-
piggyBac can bypass DNA synthesis during cut and paste transposition
-
Mitra R, Fain-Thornton J, Craig NL. 2008. piggyBac can bypass DNA synthesis during cut and paste transposition. EMBO J 27:1097-1109.
-
(2008)
EMBO J
, vol.27
, pp. 1097-1109
-
-
Mitra, R.1
Fain-Thornton, J.2
Craig, N.L.3
-
64
-
-
84864710938
-
Functional characterization of an active Rag-like transposase
-
Hencken CG, Li X, Craig NL. 2012. Functional characterization of an active Rag-like transposase. Nat Struct Molec Biol 19:834-836.
-
(2012)
Nat Struct Molec Biol
, vol.19
, pp. 834-836
-
-
Hencken, C.G.1
Li, X.2
Craig, N.L.3
-
65
-
-
0028010888
-
HhaI methyltransferase flips its target base out of the DNA helix
-
Klimasauskas S, Kumar S, Roberts RJ, Cheng X. 1994. HhaI methyltransferase flips its target base out of the DNA helix. Cell 76:357-369.
-
(1994)
Cell
, vol.76
, pp. 357-369
-
-
Klimasauskas, S.1
Kumar, S.2
Roberts, R.J.3
Cheng, X.4
-
66
-
-
0034651873
-
DNA bending and a flipout mechanism for base excision by the helix-hairpin-helix DNA glycosylase, Escherichia coli AlkA
-
Hollis T, Ichikawa Y, Ellenberger T. 2000. DNA bending and a flipout mechanism for base excision by the helix-hairpin-helix DNA glycosylase, Escherichia coli AlkA. EMBO J 19:758-766.
-
(2000)
EMBO J
, vol.19
, pp. 758-766
-
-
Hollis, T.1
Ichikawa, Y.2
Ellenberger, T.3
-
67
-
-
34250351876
-
Base-flipping dynamics in a DNA hairpin processing reaction
-
Bischerour J, Chalmers R. 2007. Base-flipping dynamics in a DNA hairpin processing reaction. Nucleic Acids Res 35:2584-2595.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 2584-2595
-
-
Bischerour, J.1
Chalmers, R.2
-
68
-
-
67650520157
-
Base flipping in Tn10 transposition: an active flip and capture mechanism
-
Bischerour J, Chalmers R. 2009. Base flipping in Tn10 transposition: an active flip and capture mechanism. PloS One 4:e6201.
-
(2009)
PloS One
, vol.4
, pp. e6201
-
-
Bischerour, J.1
Chalmers, R.2
-
69
-
-
0035355459
-
Determinants for hairpin formation in Tn10 transposition
-
Allingham JS, Wardle SJ, Haniford DB. 2001. Determinants for hairpin formation in Tn10 transposition. EMBO J 20:2931-2942.
-
(2001)
EMBO J
, vol.20
, pp. 2931-2942
-
-
Allingham, J.S.1
Wardle, S.J.2
Haniford, D.B.3
-
70
-
-
77957679279
-
Tracking, tuning, and terminating microbial physiology using synthetic riboregulators
-
Callura JM, Dwyer DJ, Isaacs FJ, Cantor CR, Collins JJ. 2010. Tracking, tuning, and terminating microbial physiology using synthetic riboregulators. Proc Natl Acad Sci U S A 107:15898-15903.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 15898-15903
-
-
Callura, J.M.1
Dwyer, D.J.2
Isaacs, F.J.3
Cantor, C.R.4
Collins, J.J.5
-
71
-
-
84889685663
-
The centrality of RNA for engineering gene expression
-
Chappell J, Takahashi MK, Meyer S, Loughrey D, Watters KE, Lucks J. 2013. The centrality of RNA for engineering gene expression. Biotechnol J 8:1379-1395.
-
(2013)
Biotechnol J
, vol.8
, pp. 1379-1395
-
-
Chappell, J.1
Takahashi, M.K.2
Meyer, S.3
Loughrey, D.4
Watters, K.E.5
Lucks, J.6
-
72
-
-
0025305877
-
The IS10 antisense RNA blocks ribosome binding at the transposase translation initiation site
-
Ma C, Simons RW. 1990. The IS10 antisense RNA blocks ribosome binding at the transposase translation initiation site.EMBOJ 9:1267-1274
-
(1990)
EMBOJ
, vol.9
, pp. 1267-1274
-
-
Ma, C.1
Simons, R.W.2
-
73
-
-
84859842558
-
Rationally designed families of orthogonal RNA regulators of translation
-
Mutalik VK, Qi L, Guimaraes JC, Lucks JB, Arkin AP. 2012. Rationally designed families of orthogonal RNA regulators of translation. Nat Chem Biol 8:447-454.
-
(2012)
Nat Chem Biol
, vol.8
, pp. 447-454
-
-
Mutalik, V.K.1
Qi, L.2
Guimaraes, J.C.3
Lucks, J.B.4
Arkin, A.P.5
-
74
-
-
84863226500
-
Engineering naturally occurring trans-acting non-coding RNAs to sense molecular signals
-
Qi L, Lucks JB, Liu CC, Mutalik VK, Arkin AP. 2012. Engineering naturally occurring trans-acting non-coding RNAs to sense molecular signals. Nucleic Acids Res 40:5775-5786.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 5775-5786
-
-
Qi, L.1
Lucks, J.B.2
Liu, C.C.3
Mutalik, V.K.4
Arkin, A.P.5
-
75
-
-
84883467214
-
A modular strategy for engineering orthogonal chimeric RNA transcription regulators
-
Takahashi MK, Lucks JB. 2013. A modular strategy for engineering orthogonal chimeric RNA transcription regulators. Nucleic Acids Res 41:7577-7588.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. 7577-7588
-
-
Takahashi, M.K.1
Lucks, J.B.2
|