-
1
-
-
33847077659
-
Beyond the sequence: Cellular organization of genome function
-
Misteli, T. Beyond the sequence: cellular organization of genome function. Cell. 128, 787-800 (2007).
-
(2007)
Cell
, vol.128
, pp. 787-800
-
-
Misteli, T.1
-
2
-
-
70349873824
-
Comprehensive mapping of long-range interactions reveals folding principles of the human genome
-
Lieberman-Aiden, E. et al. Comprehensive mapping of long-range interactions reveals folding principles of the human genome. Science. 326, 289-293 (2009).
-
(2009)
Science
, vol.326
, pp. 289-293
-
-
Lieberman-Aiden, E.1
-
3
-
-
0037083376
-
Capturing chromosome conformation
-
Dekker, J., Rippe, K., Dekker, M., Kleckner M. Capturing chromosome conformation. Science, 295, 1306-1311 (2002).
-
(2002)
Science
, vol.295
, pp. 1306-1311
-
-
Dekker, J.1
Rippe, K.2
Dekker, M.3
Kleckner, M.4
-
5
-
-
0027357058
-
Self-similarity in the structure of DNA: Why are introns needed?
-
Grosberg, A., Rabin, I., Khavlin S., Nir, A. Self-similarity in the structure of DNA: why are introns needed? Biofizika. 38, 75-83 (1993).
-
(1993)
Biofizika
, vol.38
, pp. 75-83
-
-
Grosberg, A.1
Rabin, I.2
Khavlin, S.3
Nir, A.4
-
6
-
-
84908567427
-
3D genome reconstruction from chromosomal contacts
-
Lesne, A., Riposo, J., Roger, P., Cournac, A., Mozziconacci, J. 3D genome reconstruction from chromosomal contacts. Nature Methods. 11, 1141-1143 (2014).
-
(2014)
Nature Methods
, vol.11
, pp. 1141-1143
-
-
Lesne, A.1
Riposo, J.2
Roger, P.3
Cournac, A.4
Mozziconacci, J.5
-
7
-
-
84911456108
-
FisHiCal: An R package for iterative FISH-based calibration of Hi-C data
-
Shavit, Y., Kathryn, F., Pietro, L. FisHiCal: An R package for iterative FISH-based calibration of Hi-C data. Bioinformatics. 30, 3120-3122 (2014).
-
(2014)
Bioinformatics
, vol.30
, pp. 3120-3122
-
-
Shavit, Y.1
Kathryn, F.2
Pietro, L.3
-
10
-
-
4444221565
-
UCSF Chimera-a visualization system for exploratory research and analysis
-
Pettersen, E. F. et al. UCSF Chimera-a visualization system for exploratory research and analysis. Journal of computational chemistry. 25, 1605-1612 (2004).
-
(2004)
Journal of Computational Chemistry
, vol.25
, pp. 1605-1612
-
-
Pettersen, E.F.1
-
11
-
-
0032214622
-
Protein Data Bank (PDB): Database of three-dimensional structural information of biological macromolecules. Acta crystallographica. Section D
-
Sussman, J. L. et al. Protein Data Bank (PDB): database of three-dimensional structural information of biological macromolecules. Acta crystallographica. Section D, Biological crystallography. 54, 1078-1084 (2008).
-
(2008)
Biological Crystallography
, vol.54
, pp. 1078-1084
-
-
Sussman, J.L.1
-
12
-
-
77956456751
-
Genome3D: A viewer-model framework for integrating and visualizing multiscale epigenomic information within a three-dimensional genome
-
Asbury, T. M., Mitman, M., Tang, J., Zheng, W. J. Genome3D: a viewer-model framework for integrating and visualizing multiscale epigenomic information within a three-dimensional genome. BMC bioinformatics. 11, 444 (2010).
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 444
-
-
Asbury, T.M.1
Mitman, M.2
Tang, J.3
Zheng, W.J.4
-
13
-
-
84867498711
-
A fractal model for nuclear organization: Current evidence and biological implications
-
Bancaud, A., Lavelle, C., Huet, S., Elleberg, J. A fractal model for nuclear organization: current evidence and biological implications. Nucleic acids research. 40, 8783-8792 (2012).
-
(2012)
Nucleic Acids Research
, vol.40
, pp. 8783-8792
-
-
Bancaud, A.1
Lavelle, C.2
Huet, S.3
Elleberg, J.4
-
14
-
-
75549089335
-
Ensembl's 10th year
-
Flicek, P. et al. Ensembl's 10th year. Nucleic acids research. 38, D557-562 (2010).
-
(2010)
Nucleic Acids Research
, vol.38
, pp. D557-562
-
-
Flicek, P.1
-
15
-
-
84868016994
-
JEnsembl: A version-aware Java API to Ensembl data systems
-
Paterson, T., Law A. JEnsembl: a version-aware Java API to Ensembl data systems. Bioinformatics. 28, 2724-2731 (2010).
-
(2010)
Bioinformatics
, vol.28
, pp. 2724-2731
-
-
Paterson, T.1
Law, A.2
-
16
-
-
84899014890
-
Large-scale reconstruction of 3D structures of human chromosomes from chromosomal contact data
-
Trieu, T., Cheng, J. Large-scale reconstruction of 3D structures of human chromosomes from chromosomal contact data. Nucleic Acids Research. 42, doi: 10.1093/nar/gkt1411 (2014)
-
(2014)
Nucleic Acids Research
, vol.42
-
-
Trieu, T.1
Cheng, J.2
-
17
-
-
0036079158
-
The human genome browser at UCSC
-
Kent, W. J. et al. The human genome browser at UCSC. Genome Res. 6, 996-1006 (2002).
-
(2002)
Genome Res
, vol.6
, pp. 996-1006
-
-
Kent, W.J.1
-
18
-
-
84865790047
-
An integrated encyclopaedia of DNA elements in the human genome
-
The ENCODE Consortium
-
The ENCODE Consortium. An integrated encyclopaedia of DNA elements in the human genome. Nature. 489, 57-74 (2012).
-
(2012)
Nature
, vol.489
, pp. 57-74
-
-
-
19
-
-
84891783174
-
Activities at the Universal Protein Resource (UniProt)
-
The UniProt Consortium
-
The UniProt Consortium. Activities at the Universal Protein Resource (UniProt). Nucleic Acids Research. 42, D191-D198 (2014).
-
(2014)
Nucleic Acids Research
, vol.42
, pp. D191-D198
-
-
|