JEnsembl: A version-aware Java API to Ensembl data systems

Bioinformatics

Volumn 28, Issue 21, 2012, Pages 2724-2731

  Paterson, Trevor ^a   Law, Andy ^a  

^a UNIVERSITY OF EDINBURGH   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

APIS;

ARTICLE; BIOLOGY; COMPUTER PROGRAM; FACTUAL DATABASE; GENE LIBRARY; INDONESIA; INFORMATION RETRIEVAL; METHODOLOGY;

COMPUTATIONAL BIOLOGY; DATABASES, FACTUAL; GENOMIC LIBRARY; INDONESIA; INFORMATION STORAGE AND RETRIEVAL; SOFTWARE;

EID: 84868016994     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/bts525     Document Type: Article

References (6)

1. Fiume, M. et al. (2010) Savant: genome browser for high-throughput sequencing data. Bioinformatics, 26, 1938-33.
2. Flicek, P. et al. (2008) Ensembl's 10th year, 2010. Nucleic Acids Res., 38 (Suppl. 1), D557-D562.
3. Holland, R.C.G. et al. (2008) BioJava: an Open-Source Framework for Bioinformatics. Bioinformatics, 24, 2096-33.
4. Knight, R. et al. (2007) PyCogent: a toolkit for making sense from sequence. Genome Biol., 8, R171.
5. Stabenau, A. et al. (2004) The Ensembl core software libraries. Genome Res., 14, 929-33.
6. Strozzi, F. and Aerts, J.A. (2011) A Ruby API to query the Ensembl database for genomic features. Bioinformatics, 27, 1013-33.