-
1
-
-
0023392267
-
A method for gene disruption that allows repeated use of URA3 selection in the construction of multiply disrupted yeast strains
-
Alani E., Cao L., Kleckner N. A method for gene disruption that allows repeated use of URA3 selection in the construction of multiply disrupted yeast strains. Genetics 1987, 116:541-545.
-
(1987)
Genetics
, vol.116
, pp. 541-545
-
-
Alani, E.1
Cao, L.2
Kleckner, N.3
-
2
-
-
63849110214
-
MzAPI: a new strategy for efficiently sharing mass spectrometry data
-
Askenazi M., Parikh J.R., Marto J.A. mzAPI: a new strategy for efficiently sharing mass spectrometry data. Nat. Methods 2009, 6:240-241. 10.1038/nmeth0409-240.
-
(2009)
Nat. Methods
, vol.6
, pp. 240-241
-
-
Askenazi, M.1
Parikh, J.R.2
Marto, J.A.3
-
3
-
-
77958587420
-
CDK12 is a transcription elongation-associated CTD kinase, the metazoan ortholog of yeast Ctk1
-
Bartkowiak B., Liu P., Phatnani H.P., Fuda N.J., Cooper J.J., Price D.H., Adelman K., Lis J.T., Greenleaf A.L. CDK12 is a transcription elongation-associated CTD kinase, the metazoan ortholog of yeast Ctk1. Genes Dev. 2010, 24:2303-2316. 10.1101/gad.1968210.
-
(2010)
Genes Dev.
, vol.24
, pp. 2303-2316
-
-
Bartkowiak, B.1
Liu, P.2
Phatnani, H.P.3
Fuda, N.J.4
Cooper, J.J.5
Price, D.H.6
Adelman, K.7
Lis, J.T.8
Greenleaf, A.L.9
-
4
-
-
84856273602
-
A universal RNA polymerase II CTD cycle is orchestrated by complex interplays between kinase, phosphatase, and isomerase enzymes along genes
-
Bataille A.R., Jeronimo C., Jacques P.-E., Laramée L., Fortin M.-È., Forest A., Bergeron M., Hanes S.D., Robert F. A universal RNA polymerase II CTD cycle is orchestrated by complex interplays between kinase, phosphatase, and isomerase enzymes along genes. Mol. Cell 2012, 45:158-170. 10.1016/j.molcel.2011.11.024.
-
(2012)
Mol. Cell
, vol.45
, pp. 158-170
-
-
Bataille, A.R.1
Jeronimo, C.2
Jacques, P.-E.3
Laramée, L.4
Fortin, M.-È.5
Forest, A.6
Bergeron, M.7
Hanes, S.D.8
Robert, F.9
-
5
-
-
0042319203
-
The CTD code
-
Buratowski S. The CTD code. Nat. Struct. Biol. 2003, 10:679-680. 10.1038/nsb0903-679.
-
(2003)
Nat. Struct. Biol.
, vol.10
, pp. 679-680
-
-
Buratowski, S.1
-
6
-
-
70449641057
-
Progression through the RNA polymerase II CTD cycle
-
Buratowski S. Progression through the RNA polymerase II CTD cycle. Mol. Cell 2009, 36:541-546. 10.1016/j.molcel.2009.10.019.
-
(2009)
Mol. Cell
, vol.36
, pp. 541-546
-
-
Buratowski, S.1
-
7
-
-
37249015899
-
Transcribing RNA polymerase II is phosphorylated at CTD residue serine-7
-
Chapman R.D., Heidemann M., Albert T.K., Mailhammer R., Flatley A., Meisterernst M., Kremmer E., Eick D. Transcribing RNA polymerase II is phosphorylated at CTD residue serine-7. Science 2007, 318:1780-1782. 10.1126/science.1145977.
-
(2007)
Science
, vol.318
, pp. 1780-1782
-
-
Chapman, R.D.1
Heidemann, M.2
Albert, T.K.3
Mailhammer, R.4
Flatley, A.5
Meisterernst, M.6
Kremmer, E.7
Eick, D.8
-
8
-
-
0035893314
-
Opposing effects of Ctk1 kinase and Fcp1 phosphatase at Ser 2 of the RNA polymerase II C-terminal domain
-
Cho E.J., Kobor M.S., Kim M., Greenblatt J., Buratowski S. Opposing effects of Ctk1 kinase and Fcp1 phosphatase at Ser 2 of the RNA polymerase II C-terminal domain. Genes Dev. 2001, 15:3319-3329. 10.1101/gad.935901.
-
(2001)
Genes Dev.
, vol.15
, pp. 3319-3329
-
-
Cho, E.J.1
Kobor, M.S.2
Kim, M.3
Greenblatt, J.4
Buratowski, S.5
-
9
-
-
84889051321
-
RNA polymerase II C-terminal domain: Tethering transcription to transcript and template
-
Corden J.L. RNA polymerase II C-terminal domain: Tethering transcription to transcript and template. Chem. Rev. 2013, 113:8423-8455. 10.1021/cr400158h.
-
(2013)
Chem. Rev.
, vol.113
, pp. 8423-8455
-
-
Corden, J.L.1
-
10
-
-
84902519559
-
How an mRNA capping enzyme reads distinct RNA polymerase II and Spt5 CTD phosphorylation codes
-
Doamekpor S.K., Sanchez A.M., Schwer B., Shuman S., Lima C.D. How an mRNA capping enzyme reads distinct RNA polymerase II and Spt5 CTD phosphorylation codes. Genes Dev. 2014, 28:1323-1336. 10.1101/gad.242768.114.
-
(2014)
Genes Dev.
, vol.28
, pp. 1323-1336
-
-
Doamekpor, S.K.1
Sanchez, A.M.2
Schwer, B.3
Shuman, S.4
Lima, C.D.5
-
11
-
-
84888991588
-
The RNA polymerase II carboxy-terminal domain (CTD) code
-
Eick D., Geyer M. The RNA polymerase II carboxy-terminal domain (CTD) code. Chem. Rev. 2013, 113:8456-8490. 10.1021/cr400071f.
-
(2013)
Chem. Rev.
, vol.113
, pp. 8456-8490
-
-
Eick, D.1
Geyer, M.2
-
12
-
-
0038094496
-
Structure of an mRNA capping enzyme bound to the phosphorylated carboxy-terminal domain of RNA polymerase II
-
Fabrega C., Shen V., Shuman S., Lima C.D. Structure of an mRNA capping enzyme bound to the phosphorylated carboxy-terminal domain of RNA polymerase II. Mol. Cell 2003, 11:1549-1561.
-
(2003)
Mol. Cell
, vol.11
, pp. 1549-1561
-
-
Fabrega, C.1
Shen, V.2
Shuman, S.3
Lima, C.D.4
-
13
-
-
66149091950
-
Improved electrospray ionization efficiency compensates for diminished chromatographic resolution and enables proteomics analysis of tyrosine signaling in embryonic stem cells
-
Ficarro S.B., Zhang Y., Lu Y., Moghimi A.R., Askenazi M., Hyatt E., Smith E.D., Boyer L., Schlaeger T.M., Luckey C.J., Marto J.A. Improved electrospray ionization efficiency compensates for diminished chromatographic resolution and enables proteomics analysis of tyrosine signaling in embryonic stem cells. Anal. Chem. 2009, 81:3440-3447. 10.1021/ac802720e.
-
(2009)
Anal. Chem.
, vol.81
, pp. 3440-3447
-
-
Ficarro, S.B.1
Zhang, Y.2
Lu, Y.3
Moghimi, A.R.4
Askenazi, M.5
Hyatt, E.6
Smith, E.D.7
Boyer, L.8
Schlaeger, T.M.9
Luckey, C.J.10
Marto, J.A.11
-
15
-
-
84862206497
-
Threonine-4 of mammalian RNA polymerase II CTD is targeted by Polo-like kinase 3 and required for transcriptional elongation
-
Hintermair C., Heidemann M., Koch F., Descostes N., Gut M., Gut I., Fenouil R., Ferrier P., Flatley A., Kremmer E., et al. Threonine-4 of mammalian RNA polymerase II CTD is targeted by Polo-like kinase 3 and required for transcriptional elongation. EMBO J. 2012, 31:2784-2797. 10.1038/emboj.2012.123.
-
(2012)
EMBO J.
, vol.31
, pp. 2784-2797
-
-
Hintermair, C.1
Heidemann, M.2
Koch, F.3
Descostes, N.4
Gut, M.5
Gut, I.6
Fenouil, R.7
Ferrier, P.8
Flatley, A.9
Kremmer, E.10
-
16
-
-
0141557763
-
Bur1 kinase is required for efficient transcription elongation by RNA polymerase II
-
Keogh M.C., Podolny V., Buratowski S. Bur1 kinase is required for efficient transcription elongation by RNA polymerase II. Mol. Cell. Biol. 2003, 23:7005-7018.
-
(2003)
Mol. Cell. Biol.
, vol.23
, pp. 7005-7018
-
-
Keogh, M.C.1
Podolny, V.2
Buratowski, S.3
-
17
-
-
9644310314
-
The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II
-
Kim M., Krogan N.J., Vasiljeva L., Rando O.J., Nedea E., Greenblatt J.F., Buratowski S. The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II. Nature 2004, 432:517-522. 10.1038/nature03041.
-
(2004)
Nature
, vol.432
, pp. 517-522
-
-
Kim, M.1
Krogan, N.J.2
Vasiljeva, L.3
Rando, O.J.4
Nedea, E.5
Greenblatt, J.F.6
Buratowski, S.7
-
18
-
-
70350389837
-
Phosphorylation of the yeast Rpb1 C-terminal domain at serines 2, 5, and 7
-
Kim M., Suh H., Cho E.J., Buratowski S. Phosphorylation of the yeast Rpb1 C-terminal domain at serines 2, 5, and 7. J. Biol. Chem. 2009, 39:26421-26426. 10.1074/jbc.M109.028993.
-
(2009)
J. Biol. Chem.
, vol.39
, pp. 26421-26426
-
-
Kim, M.1
Suh, H.2
Cho, E.J.3
Buratowski, S.4
-
19
-
-
0034307008
-
Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription
-
Komarnitsky P., Cho E.J., Buratowski S. Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription. Genes Dev. 2000, 14:2452-2460.
-
(2000)
Genes Dev.
, vol.14
, pp. 2452-2460
-
-
Komarnitsky, P.1
Cho, E.J.2
Buratowski, S.3
-
20
-
-
77957770031
-
Cooperative interaction of transcription termination factors with the RNA polymerase II C-terminal domain
-
Lunde B.M., Reichow S.L., Kim M., Suh H., Leeper T.C., Yang F., Mutschler H., Buratowski S., Meinhart A., Varani G. Cooperative interaction of transcription termination factors with the RNA polymerase II C-terminal domain. Nat. Struct. Mol. Biol. 2010, 17:1195-1201. 10.1038/nsmb.1893.
-
(2010)
Nat. Struct. Mol. Biol.
, vol.17
, pp. 1195-1201
-
-
Lunde, B.M.1
Reichow, S.L.2
Kim, M.3
Suh, H.4
Leeper, T.C.5
Yang, F.6
Mutschler, H.7
Buratowski, S.8
Meinhart, A.9
Varani, G.10
-
21
-
-
79958728225
-
Distinct RNA degradation pathways and 3' extensions of yeast non-coding RNA species
-
Marquardt S., Hazelbaker D.Z., Buratowski S. Distinct RNA degradation pathways and 3' extensions of yeast non-coding RNA species. Transcription 2011, 2:145-154. 10.4161/trns.2.3.16298.
-
(2011)
Transcription
, vol.2
, pp. 145-154
-
-
Marquardt, S.1
Hazelbaker, D.Z.2
Buratowski, S.3
-
22
-
-
77957766550
-
Uniform transitions of the general RNA polymerase II transcription complex
-
Mayer A., Lidschreiber M., Siebert M., Leike K., Söding J., Cramer P. Uniform transitions of the general RNA polymerase II transcription complex. Nat. Struct. Mol. Biol. 2010, 17:1272-1278. 10.1038/nsmb.1903.
-
(2010)
Nat. Struct. Mol. Biol.
, vol.17
, pp. 1272-1278
-
-
Mayer, A.1
Lidschreiber, M.2
Siebert, M.3
Leike, K.4
Söding, J.5
Cramer, P.6
-
23
-
-
84862977456
-
CTD tyrosine phosphorylation impairs termination factor recruitment to RNA polymerase II
-
Mayer A., Heidemann M., Lidschreiber M., Schreieck A., Sun M., Hintermair C., Kremmer E., Eick D., Cramer P. CTD tyrosine phosphorylation impairs termination factor recruitment to RNA polymerase II. Science 2012, 336:1723-1725. 10.1126/science.1219651.
-
(2012)
Science
, vol.336
, pp. 1723-1725
-
-
Mayer, A.1
Heidemann, M.2
Lidschreiber, M.3
Schreieck, A.4
Sun, M.5
Hintermair, C.6
Kremmer, E.7
Eick, D.8
Cramer, P.9
-
24
-
-
62549104640
-
Phosphorylation of the Pol II CTD by KIN28 enhances BUR1/BUR2 recruitment and Ser2 CTD phosphorylation near promoters
-
Qiu H., Hu C., Hinnebusch A.G. Phosphorylation of the Pol II CTD by KIN28 enhances BUR1/BUR2 recruitment and Ser2 CTD phosphorylation near promoters. Mol. Cell 2009, 33:752-762. 10.1016/j.molcel.2009.02.018.
-
(2009)
Mol. Cell
, vol.33
, pp. 752-762
-
-
Qiu, H.1
Hu, C.2
Hinnebusch, A.G.3
-
25
-
-
84884589009
-
The C-terminal domain of Rpb1 functions on other RNA polymerase II subunits
-
Suh H., Hazelbaker D.Z., Soares L.M., Buratowski S. The C-terminal domain of Rpb1 functions on other RNA polymerase II subunits. Mol. Cell 2013, 51:850-858. 10.1016/j.molcel.2013.08.015.
-
(2013)
Mol. Cell
, vol.51
, pp. 850-858
-
-
Suh, H.1
Hazelbaker, D.Z.2
Soares, L.M.3
Buratowski, S.4
-
26
-
-
77956344274
-
Chemical-genomic dissection of the CTD code
-
Tietjen J.R., Zhang D.W., Rodríguez-Molina J.B., White B.E., Akhtar M.S., Heidemann M., Li X., Chapman R.D., Shokat K., Keles S., et al. Chemical-genomic dissection of the CTD code. Nat. Struct. Mol. Biol. 2010, 17:1154-1161. 10.1038/nsmb.1900.
-
(2010)
Nat. Struct. Mol. Biol.
, vol.17
, pp. 1154-1161
-
-
Tietjen, J.R.1
Zhang, D.W.2
Rodríguez-Molina, J.B.3
White, B.E.4
Akhtar, M.S.5
Heidemann, M.6
Li, X.7
Chapman, R.D.8
Shokat, K.9
Keles, S.10
|