Optical data compression in time stretch imaging

PLoS ONE

Volumn 10, Issue 4, 2015, Pages

  Chen, Claire Lifan ^a,b   Mahjoubfar, Ata ^a,b   Jalali, Bahram ^a,b,c  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b CALIFORNIA NANOSYSTEMS INSTITUTE   (United States)

^c Department of Civil and Environmental Engineering   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CAMERA; CONTROLLED STUDY; DATA PROCESSING; DATA SYNTHESIS; DIGITAL IMAGING; EXPERIMENTAL STUDY; FLUORESCENCE IMAGING; GEOLOGICAL TIME; IMAGE ANALYSIS; IMAGE PROCESSING; IMAGING; INFORMATION STORAGE; REAL TIME OPTICAL IMAGE COMPRESSION; SYSTEM ANALYSIS; TIME STRETCH IMAGING; HUMAN; INFORMATION PROCESSING; PROCEDURES;

DATA COMPRESSION; HUMANS; IMAGE PROCESSING, COMPUTER-ASSISTED; OPTICAL IMAGING;

EID: 84956702248     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0125106     Document Type: Article

References (38)

1. Jalali B, Asghari MH. Anamorphic Stretch Transform: Putting the squeeze on Big Data. Opt Photonics News. 2011; 5 (2): 24-31.
2. Goda K, Tsia KK, Jalali B. Serial time-encoded amplified imaging for realtime observation of fast dynamic phenomena. Nature. 2009; 458: 1145-1149. doi: 10.1038/nature07980 PMID: 19407796
3. Mahjoubfar A, Chen CL, Niazi KR, Rabizadeh S, Jalali B. Label-free high-throughput cell screening in flow. Biomed Opt Express. 2013; 4: 1618-1625. doi: 10.1364/BOE.4.001618 PMID: 24049682
4. Mahjoubfar A, Goda K, Ayazi A, Fard A, Kim SH, Jalali B. High-speed nanometer-resolved imaging vibrometer and velocimeter. Appl Phys Lett. 2011; 98: 101107.
5. Mahjoubfar A, Goda K, Wang C, Fard A, Adam J, Gossett DR, et al. 3D ultrafast laser scanner. Proc SPIE. 2013; 8611: 86110N.
6. Mahjoubfar A, Chen CL, Niazi K, Rabizadeh S, Jalali B. Label-free high-throughput imaging flow cytometry. Proc SPIE. 2014; 8972: 89720F.
7. Chen CL, Mahjoubfar A, Huang A, Niazi K, Rabizadeh S, Jalali B. Hyper-dimensional analysis for label-free high-throughput imaging flow cytometry. Conf Lasers Electro Optics. 2014; Applications and Technology: AW3L.2.
8. Qian F, Song Q, Tien EK, Kalyoncu SK, Boyraz O. Real-time optical imaging and tracking of micronsized particles. Opt Commun. 2009; 282 (24): 4672-4675.
9. Wong TTW, Lau AKS, Ho KKY, Tang MYH, Robles JDF, Wei X, et al. Asymmetric-detection time-stretch optical microscopy (ATOM) for ultrafast high-contrast cellular imaging in flow. Sci Rep. 2013; 4: 3656.
10. Lau AKS, Wong TW, Ho KY, Tang MTH, Chan ACS, Wei X, et al. Interferometric time-stretch microscopy for ultrafast quantitative cellular and tissue imaging at 1 μm. J Biomed Opt. 2014; 19 (7): 076001.
11. Zhang C, Xu Y, Wei X, Tsia KK, Wong KKY. Time-stretch microscopy based on time-wavelength sequence reconstruction from wideband incoherent source. Appl Phys Lett. 2014; 105: 041113.
12. Wei X, Lau AKS, Xu Y, Zhang C, Mussot A, Kudlinski A, et al. Broadband fiber-optical parametric amplification for ultrafast time-stretch imaging at 1.0μm. Opt Lett. 2014; 39: 5989-5992. doi: 10.1364/OL.39.005989 PMID: 25361137
13. Diebold ED, Buckley BW, Gossett DR, Jalali B. Digitally synthesized beat frequency multiplexing for sub-millisecond fluorescence microscopy. Nat Photonics. 2013; 7: 806-810.
14. Solli DR, Ropers C, Koonath P, Jalali B. Optical rogue waves. Nature. 2007; 450: 1054-1057. PMID: 18075587
15. Goda K, Ayazi A, Gossett DR, Sadasivam J, Lonappan CK, Sollier E, et al. High-throughput single-microparticle imaging flow analyzer. Proc Natl Acad Sci U S A. 2012; 109 (29): 11 630-11 635.
16. Ng W, Rockwood T, Reamon A. Demonstration of Channel-Stitched Photonic Time-Stretch Analog-to-Digital Converter with ENOB ≥ 8 for a 10 GHz Signal Bandwidth. GOMACTech-14, Charleston, South Carolina, 3/31/2014-4/3/2014.
17. Goda K, Mahjoubfar A, Wang C, Fard A, Adam J, Gossett DR, et al. Hybrid Dispersion Laser Scanner. Sci Rep. 2012; 2:445. doi: 10.1038/srep00445 PMID: 22685627
18. Yazaki A, Kim CK, Chan J, Mahjoubfar A, Goda K, Watanabe M, et al. Ultrafast dark-field surface inspection with hybrid-dispersion laser scanning. Appl Phys Lett. 2014; 104 (25): 251106.
19. Asghari MH, Jalali B. Anamorphic transformation and its application to time bandwidth compression. Appl Opt. 2013; 52: 6735-6743. doi: 10.1364/AO.52.006735 PMID: 24085172
20. Asghari MH and Jalali B. Experimental demonstration of real-time optical data compression. Appl Phys Lett. 2014; 104: 1-4.
21. Jalali B, Chan J, Asghari MH. Time bandwidth engineering. Optica. 2014; 1: 23-31.
22. Chan J, Mahjoubfar A, Asghari MH, Jalali B. Reconstruction in Time-Bandwidth Compression Systems. Appl Phys Lett. 2014; 105 (22), 221105.
23. Goda K, Jalali B. Dispersive Fourier transformation for fast continuous single-shot measurement. Nat Photonics. 2013; 7: 102-112.
24. Mahjoubfar A, Goda K, Betts G, Jalali B. Optically amplified detection for biomedical sensing and imaging. J Opt Soc Am. 2014; 30 (10): 2124-2132. doi: 10.1364/JOSAA.30.002124 PMID: 24322867
25. Chen H, Weng Z, Liang Y, Lei C, Xing F, Chen M, et al. High speed single-pixel imaging via time domain compressive sampling. Conf Lasers Electro Optics. 2014; OSA Technical Digest: JTh2A.132.
26. Bosworth BT, Foster MA. High-speed flow imaging utilizing spectral-encoding of ultrafast pulses and compressed sensing. Conf Lasers Electro Optics. 2014; OSA Technical Digest: ATh4P.3.
27. Nichols JM, Bucholtz F. Beating Nyquist with light: a compressively sampled photonic link. Opt Express. 2011; 19: 7339-7348. doi: 10.1364/OE.19.007339 PMID: 21503044
28. Valley GC, Sefler GA, Shaw TJ. Compressive sensing of sparse radio frequency signals using optical mixing. Opt Lett. 2012; 37: 4675-4677. PMID: 23164876
29. Bosworth BT, Foster MA. High-speed ultrawideband photonically enabled compressed sensing of sparse radio frequency signals. Opt Lett. 2013; 38: 4892-4895. doi: 10.1364/OL.38.004892 PMID: 24322159
30. Liang Y, Chen M, Chen H, Lei C, Li P, and Xie S. Photonic-assisted multi-channel compressive sampling based on effective time delay pattern. Opt Express. 2013; 21: 25700-25707. doi: 10.1364/OE.21.025700 PMID: 24216795
31. Chen Y, Yu X, Chi H, Jin X, Zhang X, Zheng S, et al. Compressive sensing in a photonic link with optical integration. Opt Lett. 2014; 39: 2222-2224. doi: 10.1364/OL.39.002222 PMID: 24978956
32. Gupta V, Jafferji I, Garza M, Melnikova VO, Hasegawa DK, Pethig R, et al. ApoStream, a new dielectrophoretic device for antibody independent isolation and recovery of viable cancer cells from blood. Biomicrofluidics. 2012; 6(2): 024133.
33. http://commons.wikimedia.org/wiki/File:Istv%C3%A1n-Orosz-cylinder-painting.jpg
34. th ed. John Wiley & Sons; 2003.
35. Adam J, Mahjoubfar A, Diebold ED, Buckley BW, and Jalali B. Spectrally encoded angular light scattering. Opt Express. 2013; 21 (23): 28960-28967. doi: 10.1364/OE.21.028960 PMID: 24514410
36. Di Carlo D, Irimia D, Tompkins RG, Toner M. Continuous inertial focusing, ordering, and separation of particles in microchannels. Proc Natl Acad Sci U S A. 2007; 104: 18892-7 PMID: 18025477
37. Di Carlo D. Inertial microfluidics. Lab Chip. 2009; 9: 3038-3046 doi: 10.1039/b912547g PMID: 19823716
38. Diebold ED, Hon NK, Tan Z, Chou J, Sienicki T, Wang C, et al. Giant tunable optical dispersion using chromo-modal excitation of a multimode waveguide. Opt Express. 2011; 19: 23809-23817. doi: 10.1364/OE.19.023809 PMID: 22109406